RNA–Protein interactions for RNA: ENST00000478459.5

EPHB4-205, Transcript of EPH receptor B4, humanhuman

TSL 2

Gene EPHB4, Length 965 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-205ENST00000478459 NACC1Q96RE7 527 aa21.17■□□□□ 0.98
EPHB4-205ENST00000478459 POLR3CQ9BUI4 534 aaPredicted RBP21.17■□□□□ 0.98
EPHB4-205ENST00000478459 NRDE2Q9H7Z3 1164 aa21.17■□□□□ 0.98
EPHB4-205ENST00000478459 LRWD1Q9UFC0 647 aa21.17■□□□□ 0.98
EPHB4-205ENST00000478459 ARHGEF35A5YM69 484 aa21.16■□□□□ 0.98
EPHB4-205ENST00000478459 ALDH7A1P49419 539 aaKnown RBP21.16■□□□□ 0.98
EPHB4-205ENST00000478459 COL19A1Q14993 1142 aa21.16■□□□□ 0.98
EPHB4-205ENST00000478459 IL17AQ16552 155 aa21.16■□□□□ 0.98
EPHB4-205ENST00000478459 PADI6Q6TGC4 694 aa21.16■□□□□ 0.98
EPHB4-205ENST00000478459 FAM178BQ8IXR5 827 aa21.16■□□□□ 0.98
EPHB4-205ENST00000478459 SLC39A11Q8N1S5 342 aa21.16■□□□□ 0.98
EPHB4-205ENST00000478459 SMG8Q8ND04 991 aaKnown RBP21.16■□□□□ 0.98
EPHB4-205ENST00000478459 VN1R2Q8NFZ6 395 aa21.16■□□□□ 0.98
EPHB4-205ENST00000478459 BSNDQ8WZ55 320 aa21.16■□□□□ 0.98
EPHB4-205ENST00000478459 PGBD4Q96DM1 585 aa21.16■□□□□ 0.98
EPHB4-205ENST00000478459 MRPL9Q9BYD2 267 aaKnown RBP21.16■□□□□ 0.98
EPHB4-205ENST00000478459 CLEC1BQ9P126 229 aa21.16■□□□□ 0.98
EPHB4-205ENST00000478459 RAPGEFL1Q9UHV5 662 aa21.16■□□□□ 0.98
EPHB4-205ENST00000478459 PUF60Q9UHX1 559 aaKnown RBP21.16■□□□□ 0.98
EPHB4-205ENST00000478459 KIAA1024Q9UPX6 916 aa21.16■□□□□ 0.98
EPHB4-205ENST00000478459 SMC3Q9UQE7 1217 aa21.16■□□□□ 0.98
EPHB4-205ENST00000478459 TDRD15B5MCY1 1934 aaKnown RBP21.16■□□□□ 0.98
EPHB4-205ENST00000478459 MBTPS2O43462 519 aa21.15■□□□□ 0.98
EPHB4-205ENST00000478459 DDHD2O94830 711 aa21.15■□□□□ 0.98
EPHB4-205ENST00000478459 SKIP12755 728 aa21.15■□□□□ 0.98
EPHB4-205ENST00000478459 RPA1P27694 616 aa21.15■□□□□ 0.98
EPHB4-205ENST00000478459 RAB27AP51159 221 aa21.15■□□□□ 0.98
EPHB4-205ENST00000478459 KRT17Q04695 432 aa21.15■□□□□ 0.98
EPHB4-205ENST00000478459 UBE3AQ05086 875 aa21.15■□□□□ 0.98
EPHB4-205ENST00000478459 CSPP1Q1MSJ5 1256 aa21.15■□□□□ 0.98
EPHB4-205ENST00000478459 FAM43BQ6ZT52 329 aaPredicted RBP21.15■□□□□ 0.98
EPHB4-205ENST00000478459 EFHBQ8N7U6 833 aa21.15■□□□□ 0.98
EPHB4-205ENST00000478459 SNX29Q8TEQ0 813 aa21.15■□□□□ 0.98
EPHB4-205ENST00000478459 RSAD1Q9HA92 442 aa21.15■□□□□ 0.98
EPHB4-205ENST00000478459 DDX19AQ9NUU7 478 aaKnown RBP21.15■□□□□ 0.98
EPHB4-205ENST00000478459 CD207Q9UJ71 328 aa21.15■□□□□ 0.98
EPHB4-205ENST00000478459 IPPQ9Y573 584 aa21.15■□□□□ 0.98
EPHB4-205ENST00000478459 TTLL13PA6NNM8 815 aa21.14■□□□□ 0.97
EPHB4-205ENST00000478459 FSCN2O14926 492 aa21.14■□□□□ 0.97
EPHB4-205ENST00000478459 NCK2O43639 380 aa21.14■□□□□ 0.97
EPHB4-205ENST00000478459 NPTXRO95502 500 aa21.14■□□□□ 0.97
EPHB4-205ENST00000478459 SSBP05455 408 aaKnown RBP eCLIP21.14■□□□□ 0.97
EPHB4-205ENST00000478459 ITGA4P13612 1032 aa21.14■□□□□ 0.97
EPHB4-205ENST00000478459 ARF4P18085 180 aaPredicted RBP21.14■□□□□ 0.97
EPHB4-205ENST00000478459 TRAPPC10P48553 1259 aa21.14■□□□□ 0.97
EPHB4-205ENST00000478459 SLC11A1P49279 550 aa21.14■□□□□ 0.97
EPHB4-205ENST00000478459 PLCB3Q01970 1234 aa21.14■□□□□ 0.97
EPHB4-205ENST00000478459 ORC2Q13416 577 aaPredicted RBP21.14■□□□□ 0.97
EPHB4-205ENST00000478459 AMHR2Q16671 573 aa21.14■□□□□ 0.97
EPHB4-205ENST00000478459 GJD3Q8N144 294 aa21.14■□□□□ 0.97
EPHB4-205ENST00000478459 URGCPQ8TCY9 931 aa21.14■□□□□ 0.97
EPHB4-205ENST00000478459 TMEM169Q96HH4 297 aa21.14■□□□□ 0.97
EPHB4-205ENST00000478459 PLIN2Q99541 437 aa21.14■□□□□ 0.97
EPHB4-205ENST00000478459 KIFC3Q9BVG8 833 aa21.14■□□□□ 0.97
EPHB4-205ENST00000478459 TRAIPQ9BWF2 469 aa21.14■□□□□ 0.97
EPHB4-205ENST00000478459 DBR1Q9UK59 544 aaKnown RBP21.14■□□□□ 0.97
EPHB4-205ENST00000478459 KIF3AQ9Y496 699 aa21.14■□□□□ 0.97
EPHB4-205ENST00000478459 FAM86C2PA6NEL3 165 aa21.13■□□□□ 0.97
EPHB4-205ENST00000478459 E9PMD0 336 aa21.13■□□□□ 0.97
EPHB4-205ENST00000478459 ZNF623O75123 536 aa21.13■□□□□ 0.97
EPHB4-205ENST00000478459 AKAP5P24588 427 aa21.13■□□□□ 0.97
EPHB4-205ENST00000478459 PPM1AP35813 382 aa21.13■□□□□ 0.97
EPHB4-205ENST00000478459 MLH1P40692 756 aa21.13■□□□□ 0.97
EPHB4-205ENST00000478459 FXR2P51116 673 aaKnown RBP eCLIP21.13■□□□□ 0.97
EPHB4-205ENST00000478459 DUSP6Q16828 381 aa21.13■□□□□ 0.97
EPHB4-205ENST00000478459 TMEM132AQ24JP5 1023 aa21.13■□□□□ 0.97
EPHB4-205ENST00000478459 NOTUMQ6P988 496 aa21.13■□□□□ 0.97
EPHB4-205ENST00000478459 ZFP42Q96MM3 310 aa21.13■□□□□ 0.97
EPHB4-205ENST00000478459 TRIM6Q9C030 488 aaPredicted RBP21.13■□□□□ 0.97
EPHB4-205ENST00000478459 BHMT2Q9H2M3 363 aa21.13■□□□□ 0.97
EPHB4-205ENST00000478459 NXF3Q9H4D5 531 aaKnown RBP21.13■□□□□ 0.97
EPHB4-205ENST00000478459 FOXD4L1Q9NU39 408 aa21.13■□□□□ 0.97
EPHB4-205ENST00000478459 KLK14Q9P0G3 267 aa21.13■□□□□ 0.97
EPHB4-205ENST00000478459 CDH22Q9UJ99 828 aa21.13■□□□□ 0.97
EPHB4-205ENST00000478459 CXCL14O95715 111 aa21.12■□□□□ 0.97
EPHB4-205ENST00000478459 GALTP07902 379 aa21.12■□□□□ 0.97
EPHB4-205ENST00000478459 XRCC6P12956 609 aaKnown RBP eCLIP21.12■□□□□ 0.97
EPHB4-205ENST00000478459 NCBP1Q09161 790 aaKnown RBP21.12■□□□□ 0.97
EPHB4-205ENST00000478459 HAUS3Q68CZ6 603 aa21.12■□□□□ 0.97
EPHB4-205ENST00000478459 MRPL10Q7Z7H8 261 aaKnown RBP21.12■□□□□ 0.97
EPHB4-205ENST00000478459 VPS52Q8N1B4 723 aa21.12■□□□□ 0.97
EPHB4-205ENST00000478459 RABGGTAQ92696 567 aa21.12■□□□□ 0.97
EPHB4-205ENST00000478459 MSLNLQ96KJ4 702 aa21.12■□□□□ 0.97
EPHB4-205ENST00000478459 FAM193BQ96PV7 902 aaPredicted RBP21.12■□□□□ 0.97
EPHB4-205ENST00000478459 GAD1Q99259 594 aa21.12■□□□□ 0.97
EPHB4-205ENST00000478459 CSRNP2Q9H175 543 aa21.12■□□□□ 0.97
EPHB4-205ENST00000478459 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.12■□□□□ 0.97
EPHB4-205ENST00000478459 MIOSQ9NXC5 875 aa21.12■□□□□ 0.97
EPHB4-205ENST00000478459 PRG3Q9Y2Y8 225 aaPredicted RBP21.12■□□□□ 0.97
EPHB4-205ENST00000478459 NCLP19338 710 aaKnown RBP21.11■□□□□ 0.97
EPHB4-205ENST00000478459 SCNN1GP51170 649 aa21.11■□□□□ 0.97
EPHB4-205ENST00000478459 PUS10Q3MIT2 529 aaKnown RBP21.11■□□□□ 0.97
EPHB4-205ENST00000478459 LARP1BQ659C4 914 aaKnown RBP21.11■□□□□ 0.97
EPHB4-205ENST00000478459 DTHD1Q6ZMT9 781 aa21.11■□□□□ 0.97
EPHB4-205ENST00000478459 MCPH1Q8NEM0 835 aa21.11■□□□□ 0.97
EPHB4-205ENST00000478459 VN1R3Q9BXE9 311 aa21.11■□□□□ 0.97
EPHB4-205ENST00000478459 CACNG4Q9UBN1 327 aa21.11■□□□□ 0.97
EPHB4-205ENST00000478459 PARP2Q9UGN5 583 aa21.11■□□□□ 0.97
EPHB4-205ENST00000478459 LZTS1Q9Y250 596 aa21.11■□□□□ 0.97
EPHB4-205ENST00000478459 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms