RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 PRMT7Q9NVM4 692 aaPredicted RBP17.23■□□□□ 0.35
HMGA1-206ENST00000478214 F13A1P00488 732 aa17.22■□□□□ 0.35
HMGA1-206ENST00000478214 ITGB1P05556 798 aa17.22■□□□□ 0.35
HMGA1-206ENST00000478214 LIG1P18858 919 aa17.22■□□□□ 0.35
HMGA1-206ENST00000478214 GUCY2CP25092 1073 aa17.22■□□□□ 0.35
HMGA1-206ENST00000478214 PEX3P56589 373 aa17.22■□□□□ 0.35
HMGA1-206ENST00000478214 PTPROQ16827 1216 aa17.22■□□□□ 0.35
HMGA1-206ENST00000478214 PPP4R3CPQ6ZMV5 832 aa17.22■□□□□ 0.35
HMGA1-206ENST00000478214 LRRC43Q8N309 656 aa17.22■□□□□ 0.35
HMGA1-206ENST00000478214 KLHL23Q8NBE8 558 aa17.22■□□□□ 0.35
HMGA1-206ENST00000478214 LINC00301Q8NCQ3 95 aa17.22■□□□□ 0.35
HMGA1-206ENST00000478214 SMG8Q8ND04 991 aaKnown RBP17.22■□□□□ 0.35
HMGA1-206ENST00000478214 P2RX5Q93086 422 aa17.22■□□□□ 0.35
HMGA1-206ENST00000478214 PGBD4Q96DM1 585 aa17.22■□□□□ 0.35
HMGA1-206ENST00000478214 MRPL38Q96DV4 380 aaKnown RBP17.22■□□□□ 0.35
HMGA1-206ENST00000478214 CCDC51Q96ER9 411 aa17.22■□□□□ 0.35
HMGA1-206ENST00000478214 DRC1Q96MC2 740 aa17.22■□□□□ 0.35
HMGA1-206ENST00000478214 ZNF396Q96N95 335 aaPredicted RBP17.22■□□□□ 0.35
HMGA1-206ENST00000478214 CCSER1Q9C0I3 900 aa17.22■□□□□ 0.35
HMGA1-206ENST00000478214 CCDC113Q9H0I3 377 aa17.22■□□□□ 0.35
HMGA1-206ENST00000478214 BLOC1S4Q9NUP1 217 aa17.22■□□□□ 0.35
HMGA1-206ENST00000478214 PLAGL2Q9UPG8 496 aa17.22■□□□□ 0.35
HMGA1-206ENST00000478214 USP20Q9Y2K6 914 aa17.22■□□□□ 0.35
HMGA1-206ENST00000478214 MORC2Q9Y6X9 1032 aaPredicted RBP17.22■□□□□ 0.35
HMGA1-206ENST00000478214 UNC80Q8N2C7 3258 aa17.21■□□□□ 0.35
HMGA1-206ENST00000478214 A0A0C4DFX4 3053 aa17.21■□□□□ 0.35
HMGA1-206ENST00000478214 NPHP3-ACAD11A0A0J9YXS1 232 aa17.21■□□□□ 0.35
HMGA1-206ENST00000478214 TTLL13PA6NNM8 815 aa17.21■□□□□ 0.35
HMGA1-206ENST00000478214 SFI1A8K8P3 1242 aa17.21■□□□□ 0.35
HMGA1-206ENST00000478214 OFD1O75665 1012 aa17.21■□□□□ 0.35
HMGA1-206ENST00000478214 EDN1P05305 212 aa17.21■□□□□ 0.35
HMGA1-206ENST00000478214 PRKCBP05771 671 aa17.21■□□□□ 0.35
HMGA1-206ENST00000478214 NPTX2P47972 431 aa17.21■□□□□ 0.35
HMGA1-206ENST00000478214 DHX8Q14562 1220 aaKnown RBP17.21■□□□□ 0.35
HMGA1-206ENST00000478214 STK38Q15208 465 aa17.21■□□□□ 0.35
HMGA1-206ENST00000478214 SKIV2LQ15477 1246 aaKnown RBP17.21■□□□□ 0.35
HMGA1-206ENST00000478214 MAPK6Q16659 721 aa17.21■□□□□ 0.35
HMGA1-206ENST00000478214 FAM187BQ17R55 369 aa17.21■□□□□ 0.35
HMGA1-206ENST00000478214 ARSHQ5FYA8 562 aa17.21■□□□□ 0.35
HMGA1-206ENST00000478214 GLB1LQ6UWU2 654 aa17.21■□□□□ 0.35
HMGA1-206ENST00000478214 AGMOQ6ZNB7 445 aa17.21■□□□□ 0.35
HMGA1-206ENST00000478214 KRI1Q8N9T8 703 aaKnown RBP17.21■□□□□ 0.35
HMGA1-206ENST00000478214 COLGALT1Q8NBJ5 622 aa17.21■□□□□ 0.35
HMGA1-206ENST00000478214 SYMPKQ92797 1274 aaKnown RBP17.21■□□□□ 0.35
HMGA1-206ENST00000478214 PRIMPOLQ96LW4 560 aa17.21■□□□□ 0.35
HMGA1-206ENST00000478214 TIPINQ9BVW5 301 aa17.21■□□□□ 0.35
HMGA1-206ENST00000478214 RNF39Q9H2S5 420 aa17.21■□□□□ 0.35
HMGA1-206ENST00000478214 AAASQ9NRG9 546 aa17.21■□□□□ 0.35
HMGA1-206ENST00000478214 INPP5FQ9Y2H2 1132 aa17.21■□□□□ 0.35
HMGA1-206ENST00000478214 IPPQ9Y573 584 aa17.21■□□□□ 0.35
HMGA1-206ENST00000478214 PCDHB12Q9Y5F1 795 aa17.21■□□□□ 0.35
HMGA1-206ENST00000478214 REV3LO60673 3130 aa17.21■□□□□ 0.35
HMGA1-206ENST00000478214 CNTNAP2Q9UHC6 1331 aa17.21■□□□□ 0.34
HMGA1-206ENST00000478214 FNDC1Q4ZHG4 1894 aaPredicted RBP17.2■□□□□ 0.34
HMGA1-206ENST00000478214 A0A1B0GUA9 196 aa17.2■□□□□ 0.34
HMGA1-206ENST00000478214 CCDC169A6NNP5 214 aa17.2■□□□□ 0.34
HMGA1-206ENST00000478214 ACKR2O00590 384 aa17.2■□□□□ 0.34
HMGA1-206ENST00000478214 CSPG5O95196 566 aa17.2■□□□□ 0.34
HMGA1-206ENST00000478214 NPTXRO95502 500 aa17.2■□□□□ 0.34
HMGA1-206ENST00000478214 LAG3P18627 525 aa17.2■□□□□ 0.34
HMGA1-206ENST00000478214 NCLP19338 710 aaKnown RBP17.2■□□□□ 0.34
HMGA1-206ENST00000478214 PBX3P40426 434 aa17.2■□□□□ 0.34
HMGA1-206ENST00000478214 CACNB1Q02641 598 aaPredicted RBP17.2■□□□□ 0.34
HMGA1-206ENST00000478214 DMP1Q13316 513 aaPredicted RBP17.2■□□□□ 0.34
HMGA1-206ENST00000478214 PRPF4BQ13523 1007 aaKnown RBP17.2■□□□□ 0.34
HMGA1-206ENST00000478214 MCM6Q14566 821 aa17.2■□□□□ 0.34
HMGA1-206ENST00000478214 NAALADL2Q58DX5 795 aa17.2■□□□□ 0.34
HMGA1-206ENST00000478214 NOMO2Q5JPE7 1267 aa17.2■□□□□ 0.34
HMGA1-206ENST00000478214 SLC27A1Q6PCB7 646 aa17.2■□□□□ 0.34
HMGA1-206ENST00000478214 GPBP1Q86WP2 473 aa17.2■□□□□ 0.34
HMGA1-206ENST00000478214 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.2■□□□□ 0.34
HMGA1-206ENST00000478214 SPPL3Q8TCT6 385 aa17.2■□□□□ 0.34
HMGA1-206ENST00000478214 RAD54LQ92698 747 aa17.2■□□□□ 0.34
HMGA1-206ENST00000478214 MRPL9Q9BYD2 267 aaKnown RBP17.2■□□□□ 0.34
HMGA1-206ENST00000478214 RSAD1Q9HA92 442 aa17.2■□□□□ 0.34
HMGA1-206ENST00000478214 HES2Q9Y543 173 aa17.2■□□□□ 0.34
HMGA1-206ENST00000478214 NLRC5Q86WI3 1866 aa17.2■□□□□ 0.34
HMGA1-206ENST00000478214 RALGAPA2Q2PPJ7 1873 aa17.19■□□□□ 0.34
HMGA1-206ENST00000478214 SPTLC2O15270 562 aa17.19■□□□□ 0.34
HMGA1-206ENST00000478214 ITGA4P13612 1032 aa17.19■□□□□ 0.34
HMGA1-206ENST00000478214 DNAJB1P25685 340 aa17.19■□□□□ 0.34
HMGA1-206ENST00000478214 AFF1P51825 1210 aaKnown RBP17.19■□□□□ 0.34
HMGA1-206ENST00000478214 EFNA5P52803 228 aa17.19■□□□□ 0.34
HMGA1-206ENST00000478214 CAMK1Q14012 370 aa17.19■□□□□ 0.34
HMGA1-206ENST00000478214 KCNT2Q6UVM3 1135 aa17.19■□□□□ 0.34
HMGA1-206ENST00000478214 THNSL1Q8IYQ7 743 aa17.19■□□□□ 0.34
HMGA1-206ENST00000478214 CNNM3Q8NE01 707 aa17.19■□□□□ 0.34
HMGA1-206ENST00000478214 APOL6Q9BWW8 343 aa17.19■□□□□ 0.34
HMGA1-206ENST00000478214 TRIM6Q9C030 488 aaPredicted RBP17.19■□□□□ 0.34
HMGA1-206ENST00000478214 LMAN2LQ9H0V9 348 aa17.19■□□□□ 0.34
HMGA1-206ENST00000478214 NXF3Q9H4D5 531 aaKnown RBP17.19■□□□□ 0.34
HMGA1-206ENST00000478214 PDZD7Q9H5P4 517 aa17.19■□□□□ 0.34
HMGA1-206ENST00000478214 KMT5AQ9NQR1 393 aa17.19■□□□□ 0.34
HMGA1-206ENST00000478214 TBC1D13Q9NVG8 400 aa17.19■□□□□ 0.34
HMGA1-206ENST00000478214 KCND2Q9NZV8 630 aa17.19■□□□□ 0.34
HMGA1-206ENST00000478214 DAXXQ9UER7 740 aaPredicted RBP17.19■□□□□ 0.34
HMGA1-206ENST00000478214 K7ERI5 159 aa17.18■□□□□ 0.34
HMGA1-206ENST00000478214 FGF18O76093 207 aa17.18■□□□□ 0.34
HMGA1-206ENST00000478214 YEATS4O95619 227 aa17.18■□□□□ 0.34
HMGA1-206ENST00000478214 TXLNAP40222 546 aa17.18■□□□□ 0.34
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