RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 FSHRP23945 695 aa8.33□□□□□ -1.08
SPTLC1-205ENST00000477888 CLCN3P51790 818 aa8.33□□□□□ -1.08
SPTLC1-205ENST00000477888 AK2P54819 239 aa8.33□□□□□ -1.08
SPTLC1-205ENST00000477888 LONRF3Q496Y0 759 aa8.33□□□□□ -1.08
SPTLC1-205ENST00000477888 LILRA6Q6PI73 481 aa8.33□□□□□ -1.08
SPTLC1-205ENST00000477888 GLB1LQ6UWU2 654 aa8.33□□□□□ -1.08
SPTLC1-205ENST00000477888 ZNF852Q6ZMS4 543 aa8.33□□□□□ -1.08
SPTLC1-205ENST00000477888 TPRG1Q6ZUI0 275 aa8.33□□□□□ -1.08
SPTLC1-205ENST00000477888 MTSS1LQ765P7 747 aa8.33□□□□□ -1.08
SPTLC1-205ENST00000477888 PIBF1Q8WXW3 757 aa8.33□□□□□ -1.08
SPTLC1-205ENST00000477888 ZNF668Q96K58 619 aaPredicted RBP8.33□□□□□ -1.08
SPTLC1-205ENST00000477888 GBP3Q9H0R5 595 aa8.33□□□□□ -1.08
SPTLC1-205ENST00000477888 CHRDQ9H2X0 955 aa8.33□□□□□ -1.08
SPTLC1-205ENST00000477888 PSTPIP2Q9H939 334 aa8.33□□□□□ -1.08
SPTLC1-205ENST00000477888 SENP2Q9HC62 589 aa8.33□□□□□ -1.08
SPTLC1-205ENST00000477888 AGO4Q9HCK5 861 aaKnown RBP8.33□□□□□ -1.08
SPTLC1-205ENST00000477888 CHST12Q9NRB3 414 aa8.33□□□□□ -1.08
SPTLC1-205ENST00000477888 SSX2IPQ9Y2D8 614 aa8.33□□□□□ -1.08
SPTLC1-205ENST00000477888 DMXL2Q8TDJ6 3036 aa8.32□□□□□ -1.08
SPTLC1-205ENST00000477888 SMG1Q96Q15 3661 aaKnown RBP8.32□□□□□ -1.08
SPTLC1-205ENST00000477888 NRP1O14786 923 aa8.32□□□□□ -1.08
SPTLC1-205ENST00000477888 MAGEB2O15479 319 aa8.32□□□□□ -1.08
SPTLC1-205ENST00000477888 TGM5O43548 720 aa8.32□□□□□ -1.08
SPTLC1-205ENST00000477888 CSDE1O75534 798 aaKnown RBP8.32□□□□□ -1.08
SPTLC1-205ENST00000477888 ZIC2O95409 532 aaPredicted RBP8.32□□□□□ -1.08
SPTLC1-205ENST00000477888 URODP06132 367 aa8.32□□□□□ -1.08
SPTLC1-205ENST00000477888 CNR2P34972 360 aa8.32□□□□□ -1.08
SPTLC1-205ENST00000477888 GPC3P51654 580 aa8.32□□□□□ -1.08
SPTLC1-205ENST00000477888 AFF1P51825 1210 aaKnown RBP8.32□□□□□ -1.08
SPTLC1-205ENST00000477888 RNASELQ05823 741 aaKnown RBP8.32□□□□□ -1.08
SPTLC1-205ENST00000477888 STPG1Q5TH74 334 aa8.32□□□□□ -1.08
SPTLC1-205ENST00000477888 FAM160B1Q5W0V3 765 aa8.32□□□□□ -1.08
SPTLC1-205ENST00000477888 SWSAP1Q6NVH7 229 aa8.32□□□□□ -1.08
SPTLC1-205ENST00000477888 EFCAB12Q6NXP0 572 aa8.32□□□□□ -1.08
SPTLC1-205ENST00000477888 PDXDC2PQ6P474 469 aa8.32□□□□□ -1.08
SPTLC1-205ENST00000477888 CYB5R4Q7L1T6 521 aa8.32□□□□□ -1.08
SPTLC1-205ENST00000477888 PALB2Q86YC2 1186 aa8.32□□□□□ -1.08
SPTLC1-205ENST00000477888 GATA6Q92908 595 aa8.32□□□□□ -1.08
SPTLC1-205ENST00000477888 FGF13Q92913 245 aa8.32□□□□□ -1.08
SPTLC1-205ENST00000477888 TMEM175Q9BSA9 504 aa8.32□□□□□ -1.08
SPTLC1-205ENST00000477888 HERC2P3Q9BVR0 1158 aa8.32□□□□□ -1.08
SPTLC1-205ENST00000477888 CNNM2Q9H8M5 875 aa8.32□□□□□ -1.08
SPTLC1-205ENST00000477888 ZNF302Q9NR11 478 aa8.32□□□□□ -1.08
SPTLC1-205ENST00000477888 CHST7Q9NS84 486 aa8.32□□□□□ -1.08
SPTLC1-205ENST00000477888 MARCH5Q9NX47 278 aa8.32□□□□□ -1.08
SPTLC1-205ENST00000477888 PCDHA6Q9UN73 950 aa8.32□□□□□ -1.08
SPTLC1-205ENST00000477888 AKT3Q9Y243 479 aa8.32□□□□□ -1.08
SPTLC1-205ENST00000477888 INPP5FQ9Y2H2 1132 aa8.32□□□□□ -1.08
SPTLC1-205ENST00000477888 FAN1Q9Y2M0 1017 aa8.32□□□□□ -1.08
SPTLC1-205ENST00000477888 MRPS17Q9Y2R5 130 aaKnown RBP8.32□□□□□ -1.08
SPTLC1-205ENST00000477888 PCDHA8Q9Y5H6 950 aa8.32□□□□□ -1.08
SPTLC1-205ENST00000477888 MAFBQ9Y5Q3 323 aaPredicted RBP8.32□□□□□ -1.08
SPTLC1-205ENST00000477888 LOC400499M0QZD8 3231 aa8.32□□□□□ -1.08
SPTLC1-205ENST00000477888 GCN1Q92616 2671 aaKnown RBP8.32□□□□□ -1.08
SPTLC1-205ENST00000477888 NBEAQ8NFP9 2946 aa8.32□□□□□ -1.08
SPTLC1-205ENST00000477888 DOCK5Q9H7D0 1870 aa8.32□□□□□ -1.08
SPTLC1-205ENST00000477888 DSPP15924 2871 aaKnown RBP8.32□□□□□ -1.08
SPTLC1-205ENST00000477888 MEIS1O00470 390 aa8.31□□□□□ -1.08
SPTLC1-205ENST00000477888 DHX15O43143 795 aaKnown RBP8.31□□□□□ -1.08
SPTLC1-205ENST00000477888 ZMYND10O75800 440 aa8.31□□□□□ -1.08
SPTLC1-205ENST00000477888 ZNF806P0C7X5 589 aa8.31□□□□□ -1.08
SPTLC1-205ENST00000477888 SKIP12755 728 aa8.31□□□□□ -1.08
SPTLC1-205ENST00000477888 NCLP19338 710 aaKnown RBP8.31□□□□□ -1.08
SPTLC1-205ENST00000477888 TMOD1P28289 359 aa8.31□□□□□ -1.08
SPTLC1-205ENST00000477888 GLUD2P49448 558 aa8.31□□□□□ -1.08
SPTLC1-205ENST00000477888 CCR3P51677 355 aa8.31□□□□□ -1.08
SPTLC1-205ENST00000477888 NTHL1P78549 312 aa8.31□□□□□ -1.08
SPTLC1-205ENST00000477888 DSG1Q02413 1049 aa8.31□□□□□ -1.08
SPTLC1-205ENST00000477888 SRSF5Q13243 272 aaKnown RBP8.31□□□□□ -1.08
SPTLC1-205ENST00000477888 PPP2R5DQ14738 602 aa8.31□□□□□ -1.08
SPTLC1-205ENST00000477888 SF3A2Q15428 464 aaKnown RBP8.31□□□□□ -1.08
SPTLC1-205ENST00000477888 UBE2SQ16763 222 aa8.31□□□□□ -1.08
SPTLC1-205ENST00000477888 AASDHQ4L235 1098 aaPredicted RBP8.31□□□□□ -1.08
SPTLC1-205ENST00000477888 CEP55Q53EZ4 464 aa8.31□□□□□ -1.08
SPTLC1-205ENST00000477888 SOWAHCQ53LP3 525 aaPredicted RBP8.31□□□□□ -1.08
SPTLC1-205ENST00000477888 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.31□□□□□ -1.08
SPTLC1-205ENST00000477888 GRASPQ7Z6J2 395 aaPredicted RBP8.31□□□□□ -1.08
SPTLC1-205ENST00000477888 LRRC71Q8N4P6 559 aa8.31□□□□□ -1.08
SPTLC1-205ENST00000477888 FAM160A2Q8N612 972 aaPredicted RBP8.31□□□□□ -1.08
SPTLC1-205ENST00000477888 RRP36Q96EU6 259 aaKnown RBP8.31□□□□□ -1.08
SPTLC1-205ENST00000477888 MAP7D2Q96T17 732 aa8.31□□□□□ -1.08
SPTLC1-205ENST00000477888 KXD1Q9BQD3 176 aa8.31□□□□□ -1.08
SPTLC1-205ENST00000477888 IER2Q9BTL4 223 aa8.31□□□□□ -1.08
SPTLC1-205ENST00000477888 SPZ1Q9BXG8 430 aa8.31□□□□□ -1.08
SPTLC1-205ENST00000477888 HEBP1Q9NRV9 189 aa8.31□□□□□ -1.08
SPTLC1-205ENST00000477888 FAM105AQ9NUU6 356 aa8.31□□□□□ -1.08
SPTLC1-205ENST00000477888 SPDYE3A6NKU9 549 aa8.3□□□□□ -1.08
SPTLC1-205ENST00000477888 CHURC1-FNTBB4DL54 471 aa8.3□□□□□ -1.08
SPTLC1-205ENST00000477888 CCER2I3L3R5 266 aa8.3□□□□□ -1.08
SPTLC1-205ENST00000477888 PYGBP11216 843 aa8.3□□□□□ -1.08
SPTLC1-205ENST00000477888 SPINK2P20155 84 aa8.3□□□□□ -1.08
SPTLC1-205ENST00000477888 SMARCA1P28370 1054 aa8.3□□□□□ -1.08
SPTLC1-205ENST00000477888 CXCL12P48061 93 aa8.3□□□□□ -1.08
SPTLC1-205ENST00000477888 FNTBP49356 437 aa8.3□□□□□ -1.08
SPTLC1-205ENST00000477888 PDE1AP54750 535 aa8.3□□□□□ -1.08
SPTLC1-205ENST00000477888 MFAP1P55081 439 aaKnown RBP8.3□□□□□ -1.08
SPTLC1-205ENST00000477888 SATB1Q01826 763 aa8.3□□□□□ -1.08
SPTLC1-205ENST00000477888 GAS6Q14393 721 aa8.3□□□□□ -1.08
SPTLC1-205ENST00000477888 IMMTQ16891 758 aaKnown RBP8.3□□□□□ -1.08
SPTLC1-205ENST00000477888 C20orf194Q5TEA3 1177 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms