RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 UPK3BL1B0FP48 263 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 UPK3BL2E5RIL1 263 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 E7ENQ6 273 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 STXBP3O00186 592 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 PFKFB2O60825 505 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 FAM107AO95990 144 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 PENKP01210 267 aaPredicted RBP5.2□□□□□ -1.58
PTCD3-212ENST00000477520 INSRRP14616 1297 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 TNFRSF8P28908 595 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 KIF5BP33176 963 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 PSMD7P51665 324 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 USP14P54578 494 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 NAP1L1P55209 391 aaKnown RBP5.2□□□□□ -1.58
PTCD3-212ENST00000477520 GNGT1P63211 74 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 MRPS35P82673 323 aaKnown RBP5.2□□□□□ -1.58
PTCD3-212ENST00000477520 FANCCQ00597 558 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 MYL5Q02045 173 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 DUSP4Q13115 394 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 PSMD2Q13200 908 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 TBX2Q13207 712 aaPredicted RBP5.2□□□□□ -1.58
PTCD3-212ENST00000477520 CUL3Q13618 768 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 LAMB3Q13751 1172 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 NFE2L2Q16236 605 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 HHATQ5VTY9 493 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 ADALQ6DHV7 355 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 MIS18BP1Q6P0N0 1132 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 ZNF530Q6P9A1 599 aaPredicted RBP5.2□□□□□ -1.58
PTCD3-212ENST00000477520 EMBQ6PCB8 327 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 C6orf89Q6UWU4 347 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 KDM7AQ6ZMT4 941 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 SYNE3Q6ZMZ3 975 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 RINLQ6ZS11 566 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 CEP57Q86XR8 500 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 CD302Q8IX05 232 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 CCDC13Q8IYE1 715 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 IFNL2Q8IZJ0 200 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 FUKQ8N0W3 1084 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 ARHGAP18Q8N392 663 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 EIF1ADQ8N9N8 165 aaKnown RBP5.2□□□□□ -1.58
PTCD3-212ENST00000477520 ENGASEQ8NFI3 743 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 DHX58Q96C10 678 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 TBC1D31Q96DN5 1066 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 AGAP3Q96P47 875 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 TSC22D3Q99576 134 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 NAPGQ99747 312 aaPredicted RBP5.2□□□□□ -1.58
PTCD3-212ENST00000477520 SDF4Q9BRK5 362 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 CCDC28BQ9BUN5 200 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 TRIM7Q9C029 511 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 KAT14Q9H8E8 782 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 SLC40A1Q9NP59 571 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 PAPOLBQ9NRJ5 636 aaKnown RBP5.2□□□□□ -1.58
PTCD3-212ENST00000477520 CIDEBQ9UHD4 219 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 DDX20Q9UHI6 824 aaKnown RBP5.2□□□□□ -1.58
PTCD3-212ENST00000477520 KCNH3Q9ULD8 1083 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 FAM184BQ9ULE4 1060 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 OVOS2A0A0G2JMS6 1433 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 SH3TC1Q8TE82 1336 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 PCDH11XQ9BZA7 1347 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 PCDH11YQ9BZA8 1340 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 LRRD1A4D1F6 860 aa5.19□□□□□ -1.58
PTCD3-212ENST00000477520 RASSF10A6NK89 507 aa5.19□□□□□ -1.58
PTCD3-212ENST00000477520 HMGB1P1B2RPK0 211 aaPredicted RBP5.19□□□□□ -1.58
PTCD3-212ENST00000477520 B4DLN1 442 aa5.19□□□□□ -1.58
PTCD3-212ENST00000477520 HRKO00198 91 aa5.19□□□□□ -1.58
PTCD3-212ENST00000477520 GIPC1O14908 333 aa5.19□□□□□ -1.58
PTCD3-212ENST00000477520 HSF2BPO75031 334 aa5.19□□□□□ -1.58
PTCD3-212ENST00000477520 USP2O75604 605 aaPredicted RBP5.19□□□□□ -1.58
PTCD3-212ENST00000477520 FLOT1O75955 427 aa5.19□□□□□ -1.58
PTCD3-212ENST00000477520 NPTXRO95502 500 aa5.19□□□□□ -1.58
PTCD3-212ENST00000477520 YEATS4O95619 227 aa5.19□□□□□ -1.58
PTCD3-212ENST00000477520 SERPINC1P01008 464 aa5.19□□□□□ -1.58
PTCD3-212ENST00000477520 SLC3A2P08195 630 aaKnown RBP5.19□□□□□ -1.58
PTCD3-212ENST00000477520 GSTA2P09210 222 aa5.19□□□□□ -1.58
PTCD3-212ENST00000477520 CCND1P24385 295 aa5.19□□□□□ -1.58
PTCD3-212ENST00000477520 MAPK8P45983 427 aa5.19□□□□□ -1.58
PTCD3-212ENST00000477520 MRPS25P82663 173 aaKnown RBP5.19□□□□□ -1.58
PTCD3-212ENST00000477520 BLMHQ13867 455 aa5.19□□□□□ -1.58
PTCD3-212ENST00000477520 TRIM14Q14142 442 aa5.19□□□□□ -1.58
PTCD3-212ENST00000477520 PUM1Q14671 1186 aaKnown RBP eCLIP5.19□□□□□ -1.58
PTCD3-212ENST00000477520 SGSM1Q2NKQ1 1148 aa5.19□□□□□ -1.58
PTCD3-212ENST00000477520 SLC4A8Q2Y0W8 1093 aa5.19□□□□□ -1.58
PTCD3-212ENST00000477520 TWISTNBQ3B726 338 aaPredicted RBP5.19□□□□□ -1.58
PTCD3-212ENST00000477520 SPATS1Q496A3 300 aa5.19□□□□□ -1.58
PTCD3-212ENST00000477520 GLE1Q53GS7 698 aaKnown RBP5.19□□□□□ -1.58
PTCD3-212ENST00000477520 ACBD5Q5T8D3 534 aaPredicted RBP5.19□□□□□ -1.58
PTCD3-212ENST00000477520 SPECC1LQ69YQ0 1117 aa5.19□□□□□ -1.58
PTCD3-212ENST00000477520 OLFM4Q6UX06 510 aa5.19□□□□□ -1.58
PTCD3-212ENST00000477520 C11orf57Q6ZUT1 292 aaPredicted RBP5.19□□□□□ -1.58
PTCD3-212ENST00000477520 RASGRP2Q7LDG7 609 aa5.19□□□□□ -1.58
PTCD3-212ENST00000477520 SP8Q8IXZ3 490 aa5.19□□□□□ -1.58
PTCD3-212ENST00000477520 TP53I13Q8NBR0 393 aaPredicted RBP5.19□□□□□ -1.58
PTCD3-212ENST00000477520 KCNG4Q8TDN1 519 aa5.19□□□□□ -1.58
PTCD3-212ENST00000477520 MRPS27Q92552 414 aaKnown RBP5.19□□□□□ -1.58
PTCD3-212ENST00000477520 CUL5Q93034 780 aa5.19□□□□□ -1.58
PTCD3-212ENST00000477520 JAKMIP2Q96AA8 810 aa5.19□□□□□ -1.58
PTCD3-212ENST00000477520 SYTL4Q96C24 671 aaPredicted RBP5.19□□□□□ -1.58
PTCD3-212ENST00000477520 PGBD1Q96JS3 809 aa5.19□□□□□ -1.58
PTCD3-212ENST00000477520 MPHOSPH6Q99547 160 aaKnown RBP5.19□□□□□ -1.58
PTCD3-212ENST00000477520 BDH2Q9BUT1 245 aa5.19□□□□□ -1.58
PTCD3-212ENST00000477520 RANBP17Q9H2T7 1088 aaKnown RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms