RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 GPRC5AQ8NFJ5 357 aa7.29□□□□□ -1.24
LDB3-206ENST00000477489 CPLX3Q8WVH0 158 aa7.29□□□□□ -1.24
LDB3-206ENST00000477489 SLC35C1Q96A29 364 aa7.29□□□□□ -1.24
LDB3-206ENST00000477489 IFT74Q96LB3 600 aa7.29□□□□□ -1.24
LDB3-206ENST00000477489 FAM81BQ96LP2 452 aa7.29□□□□□ -1.24
LDB3-206ENST00000477489 MMP19Q99542 508 aa7.29□□□□□ -1.24
LDB3-206ENST00000477489 USB1Q9BQ65 265 aaKnown RBP7.29□□□□□ -1.24
LDB3-206ENST00000477489 REPIN1Q9BWE0 567 aaKnown RBP7.29□□□□□ -1.24
LDB3-206ENST00000477489 KIAA1586Q9HCI6 787 aa7.29□□□□□ -1.24
LDB3-206ENST00000477489 ZNF302Q9NR11 478 aa7.29□□□□□ -1.24
LDB3-206ENST00000477489 PDLIM7Q9NR12 457 aa7.29□□□□□ -1.24
LDB3-206ENST00000477489 CYP26B1Q9NR63 512 aa7.29□□□□□ -1.24
LDB3-206ENST00000477489 AGPAT3Q9NRZ7 376 aa7.29□□□□□ -1.24
LDB3-206ENST00000477489 NRBP2Q9NSY0 501 aa7.29□□□□□ -1.24
LDB3-206ENST00000477489 AIPL1Q9NZN9 384 aa7.29□□□□□ -1.24
LDB3-206ENST00000477489 RBPJLQ9UBG7 517 aa7.29□□□□□ -1.24
LDB3-206ENST00000477489 GABBR1Q9UBS5 961 aa7.29□□□□□ -1.24
LDB3-206ENST00000477489 DNAI1Q9UI46 699 aa7.29□□□□□ -1.24
LDB3-206ENST00000477489 USP20Q9Y2K6 914 aa7.29□□□□□ -1.24
LDB3-206ENST00000477489 TRPM7Q96QT4 1865 aa7.29□□□□□ -1.24
LDB3-206ENST00000477489 EMSYQ7Z589 1322 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 SYNGAP1Q96PV0 1343 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 PLXNA1Q9UIW2 1896 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 UQCRHLA0A096LP55 91 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 FAM187AA6NFU0 413 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 SOWAHDA6NJG2 315 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 RBAK-RBAKDNI3L0D1 243 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 KRT86O43790 486 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 USO1O60763 962 aaKnown RBP7.28□□□□□ -1.24
LDB3-206ENST00000477489 COBLO75128 1261 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 LGR5O75473 907 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 AKAP3O75969 853 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 FARP2O94887 1054 aaPredicted RBP7.28□□□□□ -1.24
LDB3-206ENST00000477489 STBD1O95210 358 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 SERPING1P05155 500 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 UQCRHP07919 91 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 KRT13P13646 458 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 GARTP22102 1010 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 UBA1P22314 1058 aaKnown RBP7.28□□□□□ -1.24
LDB3-206ENST00000477489 NMT1P30419 496 aaKnown RBP7.28□□□□□ -1.24
LDB3-206ENST00000477489 GTF2H1P32780 548 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 ERVK-9P63128 1117 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 ERVK-24P63145 666 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 RAD51AP2Q09MP3 1159 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 FOXC1Q12948 553 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 SPA17Q15506 151 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 EXOC3L4Q17RC7 722 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 SLC9C1Q4G0N8 1177 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 ARHGAP29Q52LW3 1261 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 EAPPQ56P03 285 aaPredicted RBP7.28□□□□□ -1.24
LDB3-206ENST00000477489 PDXDC1Q6P996 788 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 TRIM65Q6PJ69 517 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 WDR59Q6PJI9 974 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 TOGARAM2Q6ZUX3 1019 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 ANO5Q75V66 913 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 PLPPR4Q7Z2D5 763 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 HAUS6Q7Z4H7 955 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 SYCP3Q8IZU3 236 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 C2orf69Q8N8R5 385 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 XXYLT1Q8NBI6 393 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 SEPT1Q8WYJ6 367 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 BAP1Q92560 729 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 ERO1AQ96HE7 468 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 CLMNQ96JQ2 1002 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 CALR3Q96L12 384 aaKnown RBP7.28□□□□□ -1.24
LDB3-206ENST00000477489 CEP170P1Q96L14 293 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 CCDC42Q96M95 316 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 PARK7Q99497 189 aaKnown RBP7.28□□□□□ -1.24
LDB3-206ENST00000477489 FGFBP2Q9BYJ0 223 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 MMRN2Q9H8L6 949 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 GBA2Q9HCG7 927 aaPredicted RBP7.28□□□□□ -1.24
LDB3-206ENST00000477489 VTA1Q9NP79 307 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 TRMT1Q9NXH9 659 aaKnown RBP7.28□□□□□ -1.24
LDB3-206ENST00000477489 SLC5A4Q9NY91 659 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 ABT1Q9ULW3 272 aaKnown RBP7.28□□□□□ -1.24
LDB3-206ENST00000477489 FZD1Q9UP38 647 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 PLXNB2O15031 1838 aa7.28□□□□□ -1.24
LDB3-206ENST00000477489 RBM47A0AV96 593 aaKnown RBP7.27□□□□□ -1.25
LDB3-206ENST00000477489 ANO9A1A5B4 782 aa7.27□□□□□ -1.25
LDB3-206ENST00000477489 BACH1O14867 736 aa7.27□□□□□ -1.25
LDB3-206ENST00000477489 NKRFO15226 690 aaKnown RBP eCLIP7.27□□□□□ -1.25
LDB3-206ENST00000477489 ZBTB24O43167 697 aaPredicted RBP7.27□□□□□ -1.25
LDB3-206ENST00000477489 ZNF862O60290 1169 aa7.27□□□□□ -1.25
LDB3-206ENST00000477489 EXOC3O60645 756 aa7.27□□□□□ -1.25
LDB3-206ENST00000477489 DXOO77932 396 aaKnown RBP7.27□□□□□ -1.25
LDB3-206ENST00000477489 SLU7O95391 586 aaKnown RBP7.27□□□□□ -1.25
LDB3-206ENST00000477489 PIGRP01833 764 aa7.27□□□□□ -1.25
LDB3-206ENST00000477489 CASQ1P31415 396 aa7.27□□□□□ -1.25
LDB3-206ENST00000477489 PRKCIP41743 596 aa7.27□□□□□ -1.25
LDB3-206ENST00000477489 NAMPTP43490 491 aa7.27□□□□□ -1.25
LDB3-206ENST00000477489 VAV2P52735 878 aa7.27□□□□□ -1.25
LDB3-206ENST00000477489 PRKCEQ02156 737 aa7.27□□□□□ -1.25
LDB3-206ENST00000477489 GUCA2AQ02747 115 aa7.27□□□□□ -1.25
LDB3-206ENST00000477489 KCNMA1Q12791 1236 aa7.27□□□□□ -1.25
LDB3-206ENST00000477489 BFSP1Q12934 665 aa7.27□□□□□ -1.25
LDB3-206ENST00000477489 GRM1Q13255 1194 aa7.27□□□□□ -1.25
LDB3-206ENST00000477489 TTLL4Q14679 1199 aa7.27□□□□□ -1.25
LDB3-206ENST00000477489 UGCGQ16739 394 aa7.27□□□□□ -1.25
LDB3-206ENST00000477489 FAM110CQ1W6H9 321 aa7.27□□□□□ -1.25
LDB3-206ENST00000477489 HABP4Q5JVS0 413 aaKnown RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms