RNA–Protein interactions for RNA: ENST00000477345.1

TPRN-203, Transcript of taperin, humanhuman

TSL 1 (best)

Gene TPRN, Length 3,350 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPRN-203ENST00000477345 SPAG7O75391 227 aa13.88□□□□□ -0.19
TPRN-203ENST00000477345 SERPINB2P05120 415 aa13.88□□□□□ -0.19
TPRN-203ENST00000477345 GSTT1P30711 240 aa13.88□□□□□ -0.19
TPRN-203ENST00000477345 ZNF131P52739 623 aa13.88□□□□□ -0.19
TPRN-203ENST00000477345 MFSD14BQ5SR56 506 aa13.88□□□□□ -0.19
TPRN-203ENST00000477345 CENPPQ6IPU0 288 aa13.88□□□□□ -0.19
TPRN-203ENST00000477345 INTS8Q75QN2 995 aaKnown RBP13.88□□□□□ -0.19
TPRN-203ENST00000477345 ARHGEF2Q92974 986 aaKnown RBP13.88□□□□□ -0.19
TPRN-203ENST00000477345 PALM3A6NDB9 673 aaPredicted RBP13.88□□□□□ -0.19
TPRN-203ENST00000477345 USP17L5A8MUK1 530 aa13.88□□□□□ -0.19
TPRN-203ENST00000477345 SPOPO43791 374 aa13.88□□□□□ -0.19
TPRN-203ENST00000477345 KRT16P08779 473 aa13.88□□□□□ -0.19
TPRN-203ENST00000477345 GBP1P32455 592 aa13.88□□□□□ -0.19
TPRN-203ENST00000477345 CASP4P49662 377 aa13.88□□□□□ -0.19
TPRN-203ENST00000477345 CCNG1P51959 295 aa13.88□□□□□ -0.19
TPRN-203ENST00000477345 USP46P62068 366 aa13.88□□□□□ -0.19
TPRN-203ENST00000477345 TCP10Q12799 353 aa13.88□□□□□ -0.19
TPRN-203ENST00000477345 TSNAXIP1Q2TAA8 658 aa13.88□□□□□ -0.19
TPRN-203ENST00000477345 RASIP1Q5U651 963 aa13.88□□□□□ -0.19
TPRN-203ENST00000477345 GBP5Q96PP8 586 aa13.88□□□□□ -0.19
TPRN-203ENST00000477345 IL17RBQ9NRM6 502 aa13.88□□□□□ -0.19
TPRN-203ENST00000477345 METTL5Q9NRN9 209 aaKnown RBP13.88□□□□□ -0.19
TPRN-203ENST00000477345 TMEM98Q9Y2Y6 226 aa13.88□□□□□ -0.19
TPRN-203ENST00000477345 ANKRD62A6NC57 917 aa13.88□□□□□ -0.19
TPRN-203ENST00000477345 USP17L15C9J2P7 530 aa13.88□□□□□ -0.19
TPRN-203ENST00000477345 USP17L13C9JLJ4 530 aa13.88□□□□□ -0.19
TPRN-203ENST00000477345 USP17L11C9JVI0 530 aa13.88□□□□□ -0.19
TPRN-203ENST00000477345 USP17L18D6R9N7 530 aa13.88□□□□□ -0.19
TPRN-203ENST00000477345 USP17L22D6RA61 530 aa13.88□□□□□ -0.19
TPRN-203ENST00000477345 USP17L17D6RBQ6 530 aa13.88□□□□□ -0.19
TPRN-203ENST00000477345 USP17L19D6RCP7 530 aa13.88□□□□□ -0.19
TPRN-203ENST00000477345 USP17L20D6RJB6 530 aa13.88□□□□□ -0.19
TPRN-203ENST00000477345 HNRNPCP07910 306 aaKnown RBP eCLIP13.88□□□□□ -0.19
TPRN-203ENST00000477345 TRIM49P0CI25 452 aa13.88□□□□□ -0.19
TPRN-203ENST00000477345 TRIM49CP0CI26 452 aa13.88□□□□□ -0.19
TPRN-203ENST00000477345 VCAM1P19320 739 aa13.88□□□□□ -0.19
TPRN-203ENST00000477345 GALCP54803 685 aa13.88□□□□□ -0.19
TPRN-203ENST00000477345 USP17L24Q0WX57 530 aa13.88□□□□□ -0.19
TPRN-203ENST00000477345 USP17L6PQ6QN14 398 aa13.88□□□□□ -0.19
TPRN-203ENST00000477345 KRT25Q7Z3Z0 450 aa13.88□□□□□ -0.19
TPRN-203ENST00000477345 FBXO33Q7Z6M2 555 aa13.88□□□□□ -0.19
TPRN-203ENST00000477345 GJD4Q96KN9 370 aaPredicted RBP13.88□□□□□ -0.19
TPRN-203ENST00000477345 ERVK-5Q9HDB9 667 aa13.88□□□□□ -0.19
TPRN-203ENST00000477345 BLOC1S4Q9NUP1 217 aa13.88□□□□□ -0.19
TPRN-203ENST00000477345 PPP1R9AQ9ULJ8 1098 aa13.88□□□□□ -0.19
TPRN-203ENST00000477345 GMEB1Q9Y692 573 aa13.88□□□□□ -0.19
TPRN-203ENST00000477345 PNPLA7Q6ZV29 1317 aa13.88□□□□□ -0.19
TPRN-203ENST00000477345 ORC4O43929 436 aa13.87□□□□□ -0.19
TPRN-203ENST00000477345 GH1P01241 217 aa13.87□□□□□ -0.19
TPRN-203ENST00000477345 PRLRP16471 622 aa13.87□□□□□ -0.19
TPRN-203ENST00000477345 ATP6V1C1P21283 382 aa13.87□□□□□ -0.19
TPRN-203ENST00000477345 TMED1Q13445 227 aa13.87□□□□□ -0.19
TPRN-203ENST00000477345 VPS72Q15906 364 aa13.87□□□□□ -0.19
TPRN-203ENST00000477345 EYA3Q99504 573 aa13.87□□□□□ -0.19
TPRN-203ENST00000477345 ADAM22Q9P0K1 906 aa13.87□□□□□ -0.19
TPRN-203ENST00000477345 NAGPAQ9UK23 515 aa13.87□□□□□ -0.19
TPRN-203ENST00000477345 COL1A1P02452 1464 aaPredicted RBP13.87□□□□□ -0.19
TPRN-203ENST00000477345 CCDC169A6NNP5 214 aa13.87□□□□□ -0.19
TPRN-203ENST00000477345 UCHL3P15374 230 aa13.87□□□□□ -0.19
TPRN-203ENST00000477345 TNFAIP3P21580 790 aa13.87□□□□□ -0.19
TPRN-203ENST00000477345 FUT4P22083 530 aa13.87□□□□□ -0.19
TPRN-203ENST00000477345 KCNA1Q09470 495 aa13.87□□□□□ -0.19
TPRN-203ENST00000477345 ECM1Q16610 540 aa13.87□□□□□ -0.19
TPRN-203ENST00000477345 FAM182AQ5T1J6 154 aa13.87□□□□□ -0.19
TPRN-203ENST00000477345 PRR5LQ6MZQ0 368 aa13.87□□□□□ -0.19
TPRN-203ENST00000477345 CCDC65Q8IXS2 484 aa13.87□□□□□ -0.19
TPRN-203ENST00000477345 SMC1BQ8NDV3 1235 aa13.87□□□□□ -0.19
TPRN-203ENST00000477345 SUPT20HQ8NEM7 779 aa13.87□□□□□ -0.19
TPRN-203ENST00000477345 DTX3LQ8TDB6 740 aa13.87□□□□□ -0.19
TPRN-203ENST00000477345 AGAP3Q96P47 875 aa13.87□□□□□ -0.19
TPRN-203ENST00000477345 CORO1BQ9BR76 489 aa13.87□□□□□ -0.19
TPRN-203ENST00000477345 SH2D3AQ9BRG2 576 aa13.87□□□□□ -0.19
TPRN-203ENST00000477345 NACA2Q9H009 215 aa13.87□□□□□ -0.19
TPRN-203ENST00000477345 ALG13Q9NP73 1137 aaKnown RBP13.87□□□□□ -0.19
TPRN-203ENST00000477345 MTRF1LQ9UGC7 380 aaKnown RBP13.87□□□□□ -0.19
TPRN-203ENST00000477345 A0A1W2PQJ5 194 aa13.86□□□□□ -0.19
TPRN-203ENST00000477345 SUPT3HO75486 399 aa13.86□□□□□ -0.19
TPRN-203ENST00000477345 NOL4O94818 638 aa13.86□□□□□ -0.19
TPRN-203ENST00000477345 TARSP26639 723 aaKnown RBP13.86□□□□□ -0.19
TPRN-203ENST00000477345 SERPINB4P48594 390 aa13.86□□□□□ -0.19
TPRN-203ENST00000477345 MARCKSL1P49006 195 aa13.86□□□□□ -0.19
TPRN-203ENST00000477345 USP11P51784 963 aa13.86□□□□□ -0.19
TPRN-203ENST00000477345 RAD23BP54727 409 aa13.86□□□□□ -0.19
TPRN-203ENST00000477345 USH1GQ495M9 461 aa13.86□□□□□ -0.19
TPRN-203ENST00000477345 ISLR2Q6UXK2 745 aa13.86□□□□□ -0.19
TPRN-203ENST00000477345 KCTD1Q719H9 257 aa13.86□□□□□ -0.19
TPRN-203ENST00000477345 C1orf131Q8NDD1 294 aaKnown RBP13.86□□□□□ -0.19
TPRN-203ENST00000477345 C1orf54Q8WWF1 131 aa13.86□□□□□ -0.19
TPRN-203ENST00000477345 RMDN2Q96LZ7 410 aa13.86□□□□□ -0.19
TPRN-203ENST00000477345 KCNMB3Q9NPA1 279 aa13.86□□□□□ -0.19
TPRN-203ENST00000477345 BARHL2Q9NY43 387 aa13.86□□□□□ -0.19
TPRN-203ENST00000477345 TUBGCP4Q9UGJ1 667 aa13.86□□□□□ -0.19
TPRN-203ENST00000477345 MSH2P43246 934 aa13.86□□□□□ -0.19
TPRN-203ENST00000477345 BTDP43251 543 aa13.86□□□□□ -0.19
TPRN-203ENST00000477345 CALCOCO2Q13137 446 aa13.86□□□□□ -0.19
TPRN-203ENST00000477345 MYBPC2Q14324 1141 aa13.86□□□□□ -0.19
TPRN-203ENST00000477345 C2CD6Q53TS8 623 aa13.86□□□□□ -0.19
TPRN-203ENST00000477345 SH2D4BQ5SQS7 431 aa13.86□□□□□ -0.19
TPRN-203ENST00000477345 SMYD1Q8NB12 490 aa13.86□□□□□ -0.19
TPRN-203ENST00000477345 C7orf25Q9BPX7 421 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms