RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, human

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSMCE4A-208	ENST00000477289	VAMP1	P23763	118 aa		5.38	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	KLRK1	P26718	216 aa		5.38	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	PML	P29590	882 aa		5.38	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	SLC7A5	Q01650	507 aa		5.38	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	DPY19L1	Q2PZI1	675 aa		5.38	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	DACT2	Q5SW24	774 aa		5.38	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	HEATR6	Q6AI08	1181 aa	Known RBP	5.38	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	B3GNT8	Q7Z7M8	397 aa		5.38	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	ARHGEF39	Q8N4T4	335 aa		5.38	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	ZNF513	Q8N8E2	541 aa	Predicted RBP	5.38	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	SMC1B	Q8NDV3	1235 aa		5.38	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	RGS22	Q8NE09	1264 aa		5.38	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	ALG3	Q92685	438 aa		5.38	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	RILPL2	Q969X0	211 aa		5.38	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	TSPAN17	Q96FV3	270 aa		5.38	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	FSD1	Q9BTV5	496 aa		5.38	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	MRI	Q9BWK5	157 aa		5.38	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	GBP3	Q9H0R5	595 aa		5.38	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	MYOZ2	Q9NPC6	264 aa		5.38	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	HMG20B	Q9P0W2	317 aa		5.38	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	DBNL	Q9UJU6	430 aa	Known RBP	5.38	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	DBR1	Q9UK59	544 aa	Known RBP	5.38	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	PMF1-BGLAP	U3KQ54	211 aa		5.38	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	AOX1	Q06278	1338 aa		5.38	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	CCDC88A	Q3V6T2	1871 aa		5.37	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	DICER1	Q9UPY3	1922 aa	Known RBP	5.37	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	SH3D21	A4FU49	640 aa		5.37	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	C2orf71	A6NGG8	1288 aa		5.37	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	TOMM70	O94826	608 aa		5.37	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	EPS15	P42566	896 aa		5.37	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	MCAM	P43121	646 aa		5.37	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	MAGEA10	P43363	369 aa	Predicted RBP	5.37	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	CFAP100	Q494V2	611 aa		5.37	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	5.37	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	SLC9C2	Q5TAH2	1124 aa		5.37	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	ADAT2	Q7Z6V5	191 aa	Known RBP	5.37	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	FERMT3	Q86UX7	667 aa		5.37	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	TICAM2	Q86XR7	235 aa		5.37	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	CPNE8	Q86YQ8	564 aa		5.37	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	APOBEC3F	Q8IUX4	373 aa	Known RBP	5.37	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	LZTR1	Q8N653	840 aa		5.37	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	RUFY2	Q8WXA3	655 aa		5.37	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	EVI5L	Q96CN4	794 aa		5.37	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	GPRASP2	Q96D09	838 aa		5.37	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	RCC1L	Q96I51	464 aa	Known RBP	5.37	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	SHD	Q96IW2	340 aa		5.37	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	SPATA32	Q96LK8	384 aa		5.37	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	SPATA25	Q9BR10	227 aa		5.37	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	TAF1D	Q9H5J8	278 aa	Predicted RBP	5.37	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	VEZT	Q9HBM0	779 aa		5.37	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	DIAPH3	Q9NSV4	1193 aa		5.37	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	GULP1	Q9UBP9	304 aa		5.37	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	BACE2	Q9Y5Z0	518 aa		5.37	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	SNED1	Q8TER0	1413 aa		5.37	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	DUOX1	Q9NRD9	1551 aa		5.37	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	TIAM2	Q8IVF5	1701 aa		5.37	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	SBF1	O95248	1867 aa		5.37	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	OVOL3	O00110	214 aa		5.36	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	MATN3	O15232	486 aa		5.36	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	PPM1B	O75688	479 aa		5.36	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	HLA-DOA	P06340	250 aa		5.36	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	PRDX5	P30044	214 aa		5.36	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	GJA8	P48165	433 aa		5.36	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	RGS3	P49796	1198 aa		5.36	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	SEPHS1	P49903	392 aa		5.36	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	PRELP	P51888	382 aa		5.36	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	PDE1A	P54750	535 aa		5.36	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	ZNF280A	P59817	542 aa	Predicted RBP	5.36	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	AMPD2	Q01433	879 aa		5.36	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	MECOM	Q03112	1051 aa		5.36	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	FSTL1	Q12841	308 aa		5.36	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	GRB10	Q13322	594 aa		5.36	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	SUPT20HL1	Q3ZLR7	823 aa		5.36	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	MAGEB6	Q8N7X4	407 aa		5.36	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	NETO2	Q8NC67	525 aa		5.36	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	OR6P1	Q8NGX9	317 aa		5.36	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	NOX5	Q96PH1	765 aa		5.36	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	MXD3	Q9BW11	206 aa		5.36	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	CRNKL1	Q9BZJ0	848 aa	Known RBP	5.36	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	NACAP1	Q9BZK3	213 aa		5.36	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	NMRK2	Q9NPI5	230 aa		5.36	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	USP40	Q9NVE5	1235 aa		5.36	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	STAP2	Q9UGK3	403 aa		5.36	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	FAN1	Q9Y2M0	1017 aa		5.36	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	PPP2R3B	Q9Y5P8	575 aa		5.36	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	LTBP1	Q14766	1721 aa		5.35	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	COL4A1	P02462	1669 aa		5.35	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	MROH7-TTC4	A0A0A0MT08	1334 aa		5.35	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	C7orf72	A4D263	438 aa		5.35	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	RNF113A	O15541	343 aa	Known RBP	5.35	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	APP	P05067	770 aa		5.35	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	GNAT2	P19087	354 aa		5.35	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	BTD	P43251	543 aa		5.35	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	ADAM17	P78536	824 aa		5.35	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	UBE3C	Q15386	1083 aa		5.35	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	NT5DC1	Q5TFE4	455 aa		5.35	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	MBLAC2	Q68D91	279 aa		5.35	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	KRT26	Q7Z3Y9	468 aa		5.35	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	TEX11	Q8IYF3	940 aa		5.35	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	FAM169B	Q8N8A8	192 aa		5.35	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms