RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 FAM129BQ96TA1 746 aa8.23□□□□□ -1.09
BRCA1-214ENST00000477152 PRRX2Q99811 253 aa8.23□□□□□ -1.09
BRCA1-214ENST00000477152 FAM49AQ9H0Q0 323 aaPredicted RBP8.23□□□□□ -1.09
BRCA1-214ENST00000477152 KCNH7Q9NS40 1196 aa8.23□□□□□ -1.09
BRCA1-214ENST00000477152 CD207Q9UJ71 328 aa8.23□□□□□ -1.09
BRCA1-214ENST00000477152 KDM3AQ9Y4C1 1321 aa8.23□□□□□ -1.09
BRCA1-214ENST00000477152 CHD9Q3L8U1 2897 aa8.23□□□□□ -1.09
BRCA1-214ENST00000477152 MYH9P35579 1960 aaKnown RBP8.23□□□□□ -1.09
BRCA1-214ENST00000477152 A0A1W2PNR3 127 aa8.22□□□□□ -1.09
BRCA1-214ENST00000477152 SMCO2A6NFE2 343 aa8.22□□□□□ -1.09
BRCA1-214ENST00000477152 H3BQ06 376 aaPredicted RBP8.22□□□□□ -1.09
BRCA1-214ENST00000477152 TGFBR3LH3BV60 316 aa8.22□□□□□ -1.09
BRCA1-214ENST00000477152 ATP9AO75110 1047 aa8.22□□□□□ -1.09
BRCA1-214ENST00000477152 DGAT1O75907 488 aa8.22□□□□□ -1.09
BRCA1-214ENST00000477152 TMOD1P28289 359 aa8.22□□□□□ -1.09
BRCA1-214ENST00000477152 GRNP28799 593 aaKnown RBP8.22□□□□□ -1.09
BRCA1-214ENST00000477152 GNA11P29992 359 aa8.22□□□□□ -1.09
BRCA1-214ENST00000477152 SMCPP49901 116 aaPredicted RBP8.22□□□□□ -1.09
BRCA1-214ENST00000477152 IDH3AP50213 366 aa8.22□□□□□ -1.09
BRCA1-214ENST00000477152 ACTR2P61160 394 aa8.22□□□□□ -1.09
BRCA1-214ENST00000477152 EHHADHQ08426 723 aa8.22□□□□□ -1.09
BRCA1-214ENST00000477152 DSC3Q14574 896 aa8.22□□□□□ -1.09
BRCA1-214ENST00000477152 COL19A1Q14993 1142 aa8.22□□□□□ -1.09
BRCA1-214ENST00000477152 UBE2SQ16763 222 aa8.22□□□□□ -1.09
BRCA1-214ENST00000477152 RUFY4Q6ZNE9 571 aa8.22□□□□□ -1.09
BRCA1-214ENST00000477152 DHX32Q7L7V1 743 aaKnown RBP8.22□□□□□ -1.09
BRCA1-214ENST00000477152 CKAP2LQ8IYA6 745 aa8.22□□□□□ -1.09
BRCA1-214ENST00000477152 ZNF689Q96CS4 500 aaPredicted RBP8.22□□□□□ -1.09
BRCA1-214ENST00000477152 CDCA3Q99618 268 aaPredicted RBP8.22□□□□□ -1.09
BRCA1-214ENST00000477152 ANO3Q9BYT9 981 aa8.22□□□□□ -1.09
BRCA1-214ENST00000477152 BCAS3Q9H6U6 928 aa8.22□□□□□ -1.09
BRCA1-214ENST00000477152 C6orf50Q9HD87 102 aa8.22□□□□□ -1.09
BRCA1-214ENST00000477152 TBC1D22BQ9NU19 505 aa8.22□□□□□ -1.09
BRCA1-214ENST00000477152 PUF60Q9UHX1 559 aaKnown RBP8.22□□□□□ -1.09
BRCA1-214ENST00000477152 LOXHD1Q8IVV2 1947 aa8.22□□□□□ -1.09
BRCA1-214ENST00000477152 IGSF9BQ9UPX0 1349 aa8.22□□□□□ -1.09
BRCA1-214ENST00000477152 A0A1B0GTH6 734 aa8.22□□□□□ -1.09
BRCA1-214ENST00000477152 NRG2O14511 850 aaPredicted RBP8.22□□□□□ -1.09
BRCA1-214ENST00000477152 MAGEB2O15479 319 aa8.22□□□□□ -1.09
BRCA1-214ENST00000477152 RPS6KA5O75582 802 aa8.22□□□□□ -1.09
BRCA1-214ENST00000477152 MZF1P28698 734 aaPredicted RBP8.22□□□□□ -1.09
BRCA1-214ENST00000477152 CD52P31358 61 aa8.22□□□□□ -1.09
BRCA1-214ENST00000477152 SARSP49591 514 aaKnown RBP8.22□□□□□ -1.09
BRCA1-214ENST00000477152 NFX1Q12986 1120 aaKnown RBP8.22□□□□□ -1.09
BRCA1-214ENST00000477152 NECTIN1Q15223 517 aa8.22□□□□□ -1.09
BRCA1-214ENST00000477152 SMAD2Q15796 467 aaKnown RBP8.22□□□□□ -1.09
BRCA1-214ENST00000477152 CTC1Q2NKJ3 1217 aa8.22□□□□□ -1.09
BRCA1-214ENST00000477152 MTHFD1LQ6UB35 978 aa8.22□□□□□ -1.09
BRCA1-214ENST00000477152 SMAP1Q8IYB5 467 aaPredicted RBP8.22□□□□□ -1.09
BRCA1-214ENST00000477152 MICAL1Q8TDZ2 1067 aa8.22□□□□□ -1.09
BRCA1-214ENST00000477152 RSPH1Q8WYR4 309 aa8.22□□□□□ -1.09
BRCA1-214ENST00000477152 FAM167AQ96KS9 214 aa8.22□□□□□ -1.09
BRCA1-214ENST00000477152 LSG1Q9H089 658 aaKnown RBP8.22□□□□□ -1.09
BRCA1-214ENST00000477152 IGFLR1Q9H665 355 aa8.22□□□□□ -1.09
BRCA1-214ENST00000477152 ATP13A2Q9NQ11 1180 aa8.22□□□□□ -1.09
BRCA1-214ENST00000477152 ZNF302Q9NR11 478 aa8.22□□□□□ -1.09
BRCA1-214ENST00000477152 NAP1L2Q9ULW6 460 aaPredicted RBP8.22□□□□□ -1.09
BRCA1-214ENST00000477152 PADI3Q9ULW8 664 aa8.22□□□□□ -1.09
BRCA1-214ENST00000477152 PLAGL2Q9UPG8 496 aa8.22□□□□□ -1.09
BRCA1-214ENST00000477152 TRANK1O15050 2925 aa8.22□□□□□ -1.09
BRCA1-214ENST00000477152 GOLGA8AA7E2F4 631 aa8.21□□□□□ -1.09
BRCA1-214ENST00000477152 GOLGA8BA8MQT2 603 aa8.21□□□□□ -1.09
BRCA1-214ENST00000477152 STXBP3O00186 592 aa8.21□□□□□ -1.09
BRCA1-214ENST00000477152 PSAPP07602 524 aa8.21□□□□□ -1.09
BRCA1-214ENST00000477152 ZSCAN20P17040 1043 aaPredicted RBP8.21□□□□□ -1.09
BRCA1-214ENST00000477152 RXRAP19793 462 aa8.21□□□□□ -1.09
BRCA1-214ENST00000477152 SREBF1P36956 1147 aa8.21□□□□□ -1.09
BRCA1-214ENST00000477152 CDC42EP1Q00587 391 aa8.21□□□□□ -1.09
BRCA1-214ENST00000477152 ZP2Q05996 745 aa8.21□□□□□ -1.09
BRCA1-214ENST00000477152 PLCB4Q15147 1175 aa8.21□□□□□ -1.09
BRCA1-214ENST00000477152 TRIP4Q15650 581 aaPredicted RBP8.21□□□□□ -1.09
BRCA1-214ENST00000477152 APOA5Q6Q788 366 aa8.21□□□□□ -1.09
BRCA1-214ENST00000477152 SLC24A5Q71RS6 500 aa8.21□□□□□ -1.09
BRCA1-214ENST00000477152 BTLAQ7Z6A9 289 aa8.21□□□□□ -1.09
BRCA1-214ENST00000477152 PLA2G4DQ86XP0 818 aa8.21□□□□□ -1.09
BRCA1-214ENST00000477152 ATP8B4Q8TF62 1192 aa8.21□□□□□ -1.09
BRCA1-214ENST00000477152 MAP7D2Q96T17 732 aa8.21□□□□□ -1.09
BRCA1-214ENST00000477152 C22orf23Q9BZE7 217 aa8.21□□□□□ -1.09
BRCA1-214ENST00000477152 IRF2BPLQ9H1B7 796 aa8.21□□□□□ -1.09
BRCA1-214ENST00000477152 ATP6V0A4Q9HBG4 840 aa8.21□□□□□ -1.09
BRCA1-214ENST00000477152 AGO4Q9HCK5 861 aaKnown RBP8.21□□□□□ -1.09
BRCA1-214ENST00000477152 BARHL2Q9NY43 387 aa8.21□□□□□ -1.09
BRCA1-214ENST00000477152 MEIS1O00470 390 aa8.21□□□□□ -1.1
BRCA1-214ENST00000477152 GRM6O15303 877 aa8.21□□□□□ -1.1
BRCA1-214ENST00000477152 MBTPS2O43462 519 aa8.21□□□□□ -1.1
BRCA1-214ENST00000477152 MAN1A2O60476 641 aa8.21□□□□□ -1.1
BRCA1-214ENST00000477152 LAG3P18627 525 aa8.21□□□□□ -1.1
BRCA1-214ENST00000477152 KLRC1P26715 233 aa8.21□□□□□ -1.1
BRCA1-214ENST00000477152 CRYBB1P53674 252 aaPredicted RBP8.21□□□□□ -1.1
BRCA1-214ENST00000477152 HYAL1Q12794 435 aa8.21□□□□□ -1.1
BRCA1-214ENST00000477152 ORC1Q13415 861 aa8.21□□□□□ -1.1
BRCA1-214ENST00000477152 ADAM15Q13444 863 aa8.21□□□□□ -1.1
BRCA1-214ENST00000477152 BMP2KLQ5H9B9 411 aa8.21□□□□□ -1.1
BRCA1-214ENST00000477152 WDR44Q5JSH3 913 aa8.21□□□□□ -1.1
BRCA1-214ENST00000477152 MARCH8Q5T0T0 291 aa8.21□□□□□ -1.1
BRCA1-214ENST00000477152 WWC2Q6AWC2 1192 aa8.21□□□□□ -1.1
BRCA1-214ENST00000477152 ZNF746Q6NUN9 644 aaPredicted RBP8.21□□□□□ -1.1
BRCA1-214ENST00000477152 ABI1Q8IZP0 508 aa8.21□□□□□ -1.1
BRCA1-214ENST00000477152 CMTR1Q8N1G2 835 aaKnown RBP8.21□□□□□ -1.1
BRCA1-214ENST00000477152 EFHBQ8N7U6 833 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms