RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 PRG3Q9Y2Y8 225 aaPredicted RBP17.38■□□□□ 0.37
SMG5-204ENST00000476954 SPEGQ15772 3267 aa17.38■□□□□ 0.37
SMG5-204ENST00000476954 F5P12259 2224 aa17.37■□□□□ 0.37
SMG5-204ENST00000476954 CARNS1A5YM72 827 aa17.37■□□□□ 0.37
SMG5-204ENST00000476954 SHISA7A6NL88 538 aa17.37■□□□□ 0.37
SMG5-204ENST00000476954 F8W810 466 aa17.37■□□□□ 0.37
SMG5-204ENST00000476954 RETP07949 1114 aa17.37■□□□□ 0.37
SMG5-204ENST00000476954 NCLP19338 710 aaKnown RBP17.37■□□□□ 0.37
SMG5-204ENST00000476954 RXRAP19793 462 aa17.37■□□□□ 0.37
SMG5-204ENST00000476954 FSHRP23945 695 aa17.37■□□□□ 0.37
SMG5-204ENST00000476954 MAGEA9P43362 315 aa17.37■□□□□ 0.37
SMG5-204ENST00000476954 AGMOQ6ZNB7 445 aa17.37■□□□□ 0.37
SMG5-204ENST00000476954 ZNF654Q8IZM8 581 aa17.37■□□□□ 0.37
SMG5-204ENST00000476954 CTCFLQ8NI51 663 aaPredicted RBP17.37■□□□□ 0.37
SMG5-204ENST00000476954 LY9Q9HBG7 655 aa17.37■□□□□ 0.37
SMG5-204ENST00000476954 RXFP1Q9HBX9 757 aa17.37■□□□□ 0.37
SMG5-204ENST00000476954 FAM217BQ9NTX9 383 aaPredicted RBP17.37■□□□□ 0.37
SMG5-204ENST00000476954 FAM105AQ9NUU6 356 aa17.37■□□□□ 0.37
SMG5-204ENST00000476954 GABBR1Q9UBS5 961 aa17.37■□□□□ 0.37
SMG5-204ENST00000476954 TGM5O43548 720 aa17.36■□□□□ 0.37
SMG5-204ENST00000476954 GAS2O43903 313 aaKnown RBP17.36■□□□□ 0.37
SMG5-204ENST00000476954 ALDH2P05091 517 aa17.36■□□□□ 0.37
SMG5-204ENST00000476954 GLUD2P49448 558 aa17.36■□□□□ 0.37
SMG5-204ENST00000476954 TRDNQ13061 729 aa17.36■□□□□ 0.37
SMG5-204ENST00000476954 CSRP2Q16527 193 aa17.36■□□□□ 0.37
SMG5-204ENST00000476954 GRASPQ7Z6J2 395 aaPredicted RBP17.36■□□□□ 0.37
SMG5-204ENST00000476954 RAB11FIP4Q86YS3 637 aa17.36■□□□□ 0.37
SMG5-204ENST00000476954 IGDCC4Q8TDY8 1250 aa17.36■□□□□ 0.37
SMG5-204ENST00000476954 TRAIPQ9BWF2 469 aa17.36■□□□□ 0.37
SMG5-204ENST00000476954 ANO3Q9BYT9 981 aa17.36■□□□□ 0.37
SMG5-204ENST00000476954 CHST12Q9NRB3 414 aa17.36■□□□□ 0.37
SMG5-204ENST00000476954 CDH7Q9ULB5 785 aa17.36■□□□□ 0.37
SMG5-204ENST00000476954 PIN4Q9Y237 131 aaKnown RBP17.36■□□□□ 0.37
SMG5-204ENST00000476954 NOTCH4Q99466 2003 aa17.35■□□□□ 0.37
SMG5-204ENST00000476954 FAM86B1E9PN63 330 aa17.35■□□□□ 0.37
SMG5-204ENST00000476954 POMCP01189 267 aa17.35■□□□□ 0.37
SMG5-204ENST00000476954 CYP21A2P08686 494 aa17.35■□□□□ 0.37
SMG5-204ENST00000476954 FAM86B2P0C5J1 330 aa17.35■□□□□ 0.37
SMG5-204ENST00000476954 TMOD1P28289 359 aa17.35■□□□□ 0.37
SMG5-204ENST00000476954 SMARCA1P28370 1054 aa17.35■□□□□ 0.37
SMG5-204ENST00000476954 RPS9P46781 194 aaKnown RBP17.35■□□□□ 0.37
SMG5-204ENST00000476954 SRSF5Q13243 272 aaKnown RBP17.35■□□□□ 0.37
SMG5-204ENST00000476954 TYW1BQ6NUM6 668 aa17.35■□□□□ 0.37
SMG5-204ENST00000476954 ELMSAN1Q6PJG2 1045 aa17.35■□□□□ 0.37
SMG5-204ENST00000476954 HEATR3Q7Z4Q2 680 aa17.35■□□□□ 0.37
SMG5-204ENST00000476954 PLA2G4DQ86XP0 818 aa17.35■□□□□ 0.37
SMG5-204ENST00000476954 CCDC82Q8N4S0 544 aa17.35■□□□□ 0.37
SMG5-204ENST00000476954 LNPKQ9C0E8 428 aa17.35■□□□□ 0.37
SMG5-204ENST00000476954 DPP7Q9UHL4 492 aa17.35■□□□□ 0.37
SMG5-204ENST00000476954 CEP131Q9UPN4 1083 aa17.35■□□□□ 0.37
SMG5-204ENST00000476954 A0A087WZ62 844 aa17.34■□□□□ 0.37
SMG5-204ENST00000476954 ZNF862O60290 1169 aa17.34■□□□□ 0.37
SMG5-204ENST00000476954 LRP3O75074 770 aa17.34■□□□□ 0.37
SMG5-204ENST00000476954 EFEMP2O95967 443 aa17.34■□□□□ 0.37
SMG5-204ENST00000476954 RPL17P18621 184 aaKnown RBP17.34■□□□□ 0.37
SMG5-204ENST00000476954 LILRA6Q6PI73 481 aa17.34■□□□□ 0.37
SMG5-204ENST00000476954 RSPO2Q6UXX9 243 aaPredicted RBP17.34■□□□□ 0.37
SMG5-204ENST00000476954 RNF168Q8IYW5 571 aaPredicted RBP17.34■□□□□ 0.37
SMG5-204ENST00000476954 CELF5Q8N6W0 485 aaKnown RBP17.34■□□□□ 0.37
SMG5-204ENST00000476954 ITFG1Q8TB96 612 aa17.34■□□□□ 0.37
SMG5-204ENST00000476954 URGCPQ8TCY9 931 aa17.34■□□□□ 0.37
SMG5-204ENST00000476954 HDAC7Q8WUI4 952 aa17.34■□□□□ 0.37
SMG5-204ENST00000476954 FGF13Q92913 245 aa17.34■□□□□ 0.37
SMG5-204ENST00000476954 FDXACB1Q9BRP7 624 aaPredicted RBP17.34■□□□□ 0.37
SMG5-204ENST00000476954 TMEM175Q9BSA9 504 aa17.34■□□□□ 0.37
SMG5-204ENST00000476954 FAM126AQ9BYI3 521 aaPredicted RBP17.34■□□□□ 0.37
SMG5-204ENST00000476954 PLEKHA4Q9H4M7 779 aa17.34■□□□□ 0.37
SMG5-204ENST00000476954 ZDHHC7Q9NXF8 308 aa17.34■□□□□ 0.37
SMG5-204ENST00000476954 FLNBO75369 2602 aaKnown RBP17.34■□□□□ 0.37
SMG5-204ENST00000476954 AKAP13Q12802 2813 aa17.33■□□□□ 0.36
SMG5-204ENST00000476954 TM4SF5O14894 197 aa17.33■□□□□ 0.36
SMG5-204ENST00000476954 ZNF623O75123 536 aa17.33■□□□□ 0.36
SMG5-204ENST00000476954 ZMYND10O75800 440 aa17.33■□□□□ 0.36
SMG5-204ENST00000476954 ZNF76P36508 570 aa17.33■□□□□ 0.36
SMG5-204ENST00000476954 DSG1Q02413 1049 aa17.33■□□□□ 0.36
SMG5-204ENST00000476954 IL31Q6EBC2 164 aa17.33■□□□□ 0.36
SMG5-204ENST00000476954 RSPH1Q8WYR4 309 aa17.33■□□□□ 0.36
SMG5-204ENST00000476954 FAM193BQ96PV7 902 aaPredicted RBP17.33■□□□□ 0.36
SMG5-204ENST00000476954 MAP3K14Q99558 947 aa17.33■□□□□ 0.36
SMG5-204ENST00000476954 LZTS2Q9BRK4 669 aa17.33■□□□□ 0.36
SMG5-204ENST00000476954 PHF20Q9BVI0 1012 aa17.33■□□□□ 0.36
SMG5-204ENST00000476954 GCOM2Q9BZD3 368 aaPredicted RBP17.33■□□□□ 0.36
SMG5-204ENST00000476954 HEBP1Q9NRV9 189 aa17.33■□□□□ 0.36
SMG5-204ENST00000476954 RXFP3Q9NSD7 469 aa17.33■□□□□ 0.36
SMG5-204ENST00000476954 STK39Q9UEW8 545 aa17.33■□□□□ 0.36
SMG5-204ENST00000476954 PCDHB2Q9Y5E7 798 aa17.33■□□□□ 0.36
SMG5-204ENST00000476954 ZFP37Q9Y6Q3 630 aaPredicted RBP17.33■□□□□ 0.36
SMG5-204ENST00000476954 ASPMQ8IZT6 3477 aa17.32■□□□□ 0.36
SMG5-204ENST00000476954 GREB1Q4ZG55 1949 aa17.32■□□□□ 0.36
SMG5-204ENST00000476954 IGLV3-22A0A075B6J6 115 aa17.32■□□□□ 0.36
SMG5-204ENST00000476954 E7EWF7 191 aa17.32■□□□□ 0.36
SMG5-204ENST00000476954 IPO5O00410 1097 aaKnown RBP17.32■□□□□ 0.36
SMG5-204ENST00000476954 HRO43593 1189 aa17.32■□□□□ 0.36
SMG5-204ENST00000476954 DDAH1O94760 285 aa17.32■□□□□ 0.36
SMG5-204ENST00000476954 SKIP12755 728 aa17.32■□□□□ 0.36
SMG5-204ENST00000476954 OR1G1P47890 313 aa17.32■□□□□ 0.36
SMG5-204ENST00000476954 PFKPQ01813 784 aa17.32■□□□□ 0.36
SMG5-204ENST00000476954 SIM2Q14190 667 aaPredicted RBP17.32■□□□□ 0.36
SMG5-204ENST00000476954 SART3Q15020 963 aaKnown RBP17.32■□□□□ 0.36
SMG5-204ENST00000476954 WWC2Q6AWC2 1192 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms