RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 AGMOQ6ZNB7 445 aa12.8□□□□□ -0.36
BRCA1-213ENST00000476777 REXO1Q8N1G1 1221 aaKnown RBP12.8□□□□□ -0.36
BRCA1-213ENST00000476777 GPR152Q8TDT2 470 aa12.8□□□□□ -0.36
BRCA1-213ENST00000476777 TMEM175Q9BSA9 504 aa12.8□□□□□ -0.36
BRCA1-213ENST00000476777 NIFKQ9BYG3 293 aaKnown RBP12.8□□□□□ -0.36
BRCA1-213ENST00000476777 SIT1Q9Y3P8 196 aa12.8□□□□□ -0.36
BRCA1-213ENST00000476777 PCDHB2Q9Y5E7 798 aa12.8□□□□□ -0.36
BRCA1-213ENST00000476777 CEP295Q9C0D2 2601 aa12.8□□□□□ -0.36
BRCA1-213ENST00000476777 TMEM150BA6NC51 233 aa12.79□□□□□ -0.36
BRCA1-213ENST00000476777 C2CD2LO14523 706 aa12.79□□□□□ -0.36
BRCA1-213ENST00000476777 INPPL1O15357 1258 aa12.79□□□□□ -0.36
BRCA1-213ENST00000476777 TEX28O15482 410 aa12.79□□□□□ -0.36
BRCA1-213ENST00000476777 EDIL3O43854 480 aa12.79□□□□□ -0.36
BRCA1-213ENST00000476777 RFPL2O75678 378 aa12.79□□□□□ -0.36
BRCA1-213ENST00000476777 KRT37O76014 449 aa12.79□□□□□ -0.36
BRCA1-213ENST00000476777 STBD1O95210 358 aa12.79□□□□□ -0.36
BRCA1-213ENST00000476777 PAPLNO95428 1278 aa12.79□□□□□ -0.36
BRCA1-213ENST00000476777 SOD2P04179 222 aa12.79□□□□□ -0.36
BRCA1-213ENST00000476777 ALDH2P05091 517 aa12.79□□□□□ -0.36
BRCA1-213ENST00000476777 ADH1AP07327 375 aa12.79□□□□□ -0.36
BRCA1-213ENST00000476777 GLULP15104 373 aa12.79□□□□□ -0.36
BRCA1-213ENST00000476777 SFNP31947 248 aa12.79□□□□□ -0.36
BRCA1-213ENST00000476777 JAK3P52333 1124 aa12.79□□□□□ -0.36
BRCA1-213ENST00000476777 EXOSC10Q01780 885 aaKnown RBP12.79□□□□□ -0.36
BRCA1-213ENST00000476777 RSPO4Q2I0M5 234 aaPredicted RBP12.79□□□□□ -0.36
BRCA1-213ENST00000476777 MTERF2Q49AM1 385 aa12.79□□□□□ -0.36
BRCA1-213ENST00000476777 TAS1R1Q7RTX1 841 aa12.79□□□□□ -0.36
BRCA1-213ENST00000476777 CATSPER4Q7RTX7 472 aa12.79□□□□□ -0.36
BRCA1-213ENST00000476777 ZNF410Q86VK4 478 aa12.79□□□□□ -0.36
BRCA1-213ENST00000476777 SUMF1Q8NBK3 374 aa12.79□□□□□ -0.36
BRCA1-213ENST00000476777 URGCPQ8TCY9 931 aa12.79□□□□□ -0.36
BRCA1-213ENST00000476777 ZNF707Q96C28 371 aaPredicted RBP12.79□□□□□ -0.36
BRCA1-213ENST00000476777 PGBD4Q96DM1 585 aa12.79□□□□□ -0.36
BRCA1-213ENST00000476777 TCEANC2Q96MN5 208 aa12.79□□□□□ -0.36
BRCA1-213ENST00000476777 CNTNAP3BQ96NU0 1288 aa12.79□□□□□ -0.36
BRCA1-213ENST00000476777 RPS6KC1Q96S38 1066 aa12.79□□□□□ -0.36
BRCA1-213ENST00000476777 RIT2Q99578 217 aa12.79□□□□□ -0.36
BRCA1-213ENST00000476777 CNTNAP3Q9BZ76 1288 aa12.79□□□□□ -0.36
BRCA1-213ENST00000476777 INO80BQ9C086 356 aaPredicted RBP12.79□□□□□ -0.36
BRCA1-213ENST00000476777 ARHGEF3Q9NR81 526 aa12.79□□□□□ -0.36
BRCA1-213ENST00000476777 FAN1Q9Y2M0 1017 aa12.79□□□□□ -0.36
BRCA1-213ENST00000476777 POTEMA6NI47 508 aa12.78□□□□□ -0.36
BRCA1-213ENST00000476777 GOLGA8AA7E2F4 631 aa12.78□□□□□ -0.36
BRCA1-213ENST00000476777 GOLGA8BA8MQT2 603 aa12.78□□□□□ -0.36
BRCA1-213ENST00000476777 ANHXE9PGG2 379 aa12.78□□□□□ -0.36
BRCA1-213ENST00000476777 NRP1O14786 923 aa12.78□□□□□ -0.36
BRCA1-213ENST00000476777 CHMP2AO43633 222 aa12.78□□□□□ -0.36
BRCA1-213ENST00000476777 GAS7O60861 476 aa12.78□□□□□ -0.36
BRCA1-213ENST00000476777 EFEMP2O95967 443 aa12.78□□□□□ -0.36
BRCA1-213ENST00000476777 GLUD1P00367 558 aa12.78□□□□□ -0.36
BRCA1-213ENST00000476777 URODP06132 367 aa12.78□□□□□ -0.36
BRCA1-213ENST00000476777 MYBP10242 640 aa12.78□□□□□ -0.36
BRCA1-213ENST00000476777 LAMP2P13473 410 aa12.78□□□□□ -0.36
BRCA1-213ENST00000476777 DNM2P50570 870 aa12.78□□□□□ -0.36
BRCA1-213ENST00000476777 AK2P54819 239 aa12.78□□□□□ -0.36
BRCA1-213ENST00000476777 XKR3Q5GH77 459 aa12.78□□□□□ -0.36
BRCA1-213ENST00000476777 POTEGQ6S5H5 508 aa12.78□□□□□ -0.36
BRCA1-213ENST00000476777 MRPL10Q7Z7H8 261 aaKnown RBP12.78□□□□□ -0.36
BRCA1-213ENST00000476777 RHPN2Q8IUC4 686 aa12.78□□□□□ -0.36
BRCA1-213ENST00000476777 KSR1Q8IVT5 923 aa12.78□□□□□ -0.36
BRCA1-213ENST00000476777 RNF168Q8IYW5 571 aaPredicted RBP12.78□□□□□ -0.36
BRCA1-213ENST00000476777 MAML2Q8IZL2 1156 aaPredicted RBP12.78□□□□□ -0.36
BRCA1-213ENST00000476777 SMG7Q92540 1137 aaKnown RBP12.78□□□□□ -0.36
BRCA1-213ENST00000476777 SLC5A5Q92911 643 aa12.78□□□□□ -0.36
BRCA1-213ENST00000476777 GJA10Q969M2 543 aa12.78□□□□□ -0.36
BRCA1-213ENST00000476777 SH2D3AQ9BRG2 576 aa12.78□□□□□ -0.36
BRCA1-213ENST00000476777 HERC2P3Q9BVR0 1158 aa12.78□□□□□ -0.36
BRCA1-213ENST00000476777 UNC45AQ9H3U1 944 aa12.78□□□□□ -0.36
BRCA1-213ENST00000476777 RSAD1Q9HA92 442 aa12.78□□□□□ -0.36
BRCA1-213ENST00000476777 C6orf50Q9HD87 102 aa12.78□□□□□ -0.36
BRCA1-213ENST00000476777 SLC2A4RGQ9NR83 387 aa12.78□□□□□ -0.36
BRCA1-213ENST00000476777 AGPAT5Q9NUQ2 364 aa12.78□□□□□ -0.36
BRCA1-213ENST00000476777 MARCH5Q9NX47 278 aa12.78□□□□□ -0.36
BRCA1-213ENST00000476777 KANSL3Q9P2N6 904 aa12.78□□□□□ -0.36
BRCA1-213ENST00000476777 SUCLA2Q9P2R7 463 aaPredicted RBP12.78□□□□□ -0.36
BRCA1-213ENST00000476777 SEPT9Q9UHD8 586 aaPredicted RBP12.78□□□□□ -0.36
BRCA1-213ENST00000476777 DPP7Q9UHL4 492 aa12.78□□□□□ -0.36
BRCA1-213ENST00000476777 MTCL1Q9Y4B5 1905 aaKnown RBP12.78□□□□□ -0.36
BRCA1-213ENST00000476777 ATRXP46100 2492 aa12.78□□□□□ -0.36
BRCA1-213ENST00000476777 RCAN1P53805 252 aa12.77□□□□□ -0.37
BRCA1-213ENST00000476777 HTR4Q13639 388 aa12.77□□□□□ -0.37
BRCA1-213ENST00000476777 KIAA0319Q5VV43 1072 aa12.77□□□□□ -0.37
BRCA1-213ENST00000476777 ELMSAN1Q6PJG2 1045 aa12.77□□□□□ -0.37
BRCA1-213ENST00000476777 DCLRE1AQ6PJP8 1040 aa12.77□□□□□ -0.37
BRCA1-213ENST00000476777 PJA1Q8NG27 643 aa12.77□□□□□ -0.37
BRCA1-213ENST00000476777 FAM193BQ96PV7 902 aaPredicted RBP12.77□□□□□ -0.37
BRCA1-213ENST00000476777 ESYT1Q9BSJ8 1104 aa12.77□□□□□ -0.37
BRCA1-213ENST00000476777 FOXQ1Q9C009 403 aa12.77□□□□□ -0.37
BRCA1-213ENST00000476777 IFT122Q9HBG6 1241 aa12.77□□□□□ -0.37
BRCA1-213ENST00000476777 RXFP1Q9HBX9 757 aa12.77□□□□□ -0.37
BRCA1-213ENST00000476777 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.77□□□□□ -0.377e-7■□□□□ 9.9
BRCA1-213ENST00000476777 SSX2IPQ9Y2D8 614 aa12.77□□□□□ -0.37
BRCA1-213ENST00000476777 CNTNAP2Q9UHC6 1331 aa12.77□□□□□ -0.37
BRCA1-213ENST00000476777 ZFHX4Q86UP3 3567 aa12.77□□□□□ -0.37
BRCA1-213ENST00000476777 KLF18A0A0U1RQI7 1052 aa12.76□□□□□ -0.37
BRCA1-213ENST00000476777 LRRN2O75325 713 aa12.76□□□□□ -0.37
BRCA1-213ENST00000476777 MAFO75444 373 aaPredicted RBP12.76□□□□□ -0.37
BRCA1-213ENST00000476777 POMCP01189 267 aa12.76□□□□□ -0.37
BRCA1-213ENST00000476777 SPATA31D3P0C874 917 aa12.76□□□□□ -0.37
BRCA1-213ENST00000476777 GNA11P29992 359 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms