RNA–Protein interactions for RNA: ENST00000476641.2

CHD6-207, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-207ENST00000476641 TIAF1O95411 115 aa9.09□□□□□ -0.95
CHD6-207ENST00000476641 GH1P01241 217 aa9.09□□□□□ -0.95
CHD6-207ENST00000476641 UBA1P22314 1058 aaKnown RBP9.09□□□□□ -0.95
CHD6-207ENST00000476641 KIF5BP33176 963 aa9.09□□□□□ -0.95
CHD6-207ENST00000476641 APOBRQ0VD83 1088 aa9.09□□□□□ -0.95
CHD6-207ENST00000476641 TMEM240Q5SV17 173 aa9.09□□□□□ -0.95
CHD6-207ENST00000476641 WWC2Q6AWC2 1192 aa9.09□□□□□ -0.95
CHD6-207ENST00000476641 ZNF365Q70YC5 407 aa9.09□□□□□ -0.95
CHD6-207ENST00000476641 SGMS1Q86VZ5 419 aa9.09□□□□□ -0.95
CHD6-207ENST00000476641 ATCAYQ86WG3 371 aa9.09□□□□□ -0.95
CHD6-207ENST00000476641 FANCBQ8NB91 859 aa9.09□□□□□ -0.95
CHD6-207ENST00000476641 SMG8Q8ND04 991 aaKnown RBP9.09□□□□□ -0.95
CHD6-207ENST00000476641 KCNB2Q92953 911 aa9.09□□□□□ -0.95
CHD6-207ENST00000476641 PGBD1Q96JS3 809 aa9.09□□□□□ -0.95
CHD6-207ENST00000476641 JAKMIP1Q96N16 626 aaKnown RBP9.09□□□□□ -0.95
CHD6-207ENST00000476641 GUCD1Q96NT3 240 aa9.09□□□□□ -0.95
CHD6-207ENST00000476641 MPHOSPH6Q99547 160 aaKnown RBP9.09□□□□□ -0.95
CHD6-207ENST00000476641 MAP3K14Q99558 947 aa9.09□□□□□ -0.95
CHD6-207ENST00000476641 SUGCTQ9HAC7 445 aa9.09□□□□□ -0.95
CHD6-207ENST00000476641 CYP4F12Q9HCS2 524 aa9.09□□□□□ -0.95
CHD6-207ENST00000476641 MTMR10Q9NXD2 777 aa9.09□□□□□ -0.95
CHD6-207ENST00000476641 CHD7Q9P2D1 2997 aa9.09□□□□□ -0.95
CHD6-207ENST00000476641 NAP1L2Q9ULW6 460 aaPredicted RBP9.09□□□□□ -0.95
CHD6-207ENST00000476641 FRMPD4Q14CM0 1322 aa9.08□□□□□ -0.96
CHD6-207ENST00000476641 MROH7Q68CQ1 1323 aa9.08□□□□□ -0.96
CHD6-207ENST00000476641 LOC100289279A0A1B0GTE1 492 aa9.08□□□□□ -0.96
CHD6-207ENST00000476641 GOLGA8AA7E2F4 631 aa9.08□□□□□ -0.96
CHD6-207ENST00000476641 GOLGA8BA8MQT2 603 aa9.08□□□□□ -0.96
CHD6-207ENST00000476641 B4DLN1 442 aa9.08□□□□□ -0.96
CHD6-207ENST00000476641 NKRFO15226 690 aaKnown RBP eCLIP9.08□□□□□ -0.96
CHD6-207ENST00000476641 DTNBO60941 627 aa9.08□□□□□ -0.96
CHD6-207ENST00000476641 GGPS1O95749 300 aa9.08□□□□□ -0.96
CHD6-207ENST00000476641 NEFLP07196 543 aa9.08□□□□□ -0.96
CHD6-207ENST00000476641 C8AP07357 584 aa9.08□□□□□ -0.96
CHD6-207ENST00000476641 CCND2P30279 289 aa9.08□□□□□ -0.96
CHD6-207ENST00000476641 HSPA4P34932 840 aa9.08□□□□□ -0.96
CHD6-207ENST00000476641 MRPL12P52815 198 aaKnown RBP9.08□□□□□ -0.96
CHD6-207ENST00000476641 ZNF200P98182 395 aaPredicted RBP9.08□□□□□ -0.96
CHD6-207ENST00000476641 HSDL1Q3SXM5 330 aa9.08□□□□□ -0.96
CHD6-207ENST00000476641 Q6ZUG5 572 aa9.08□□□□□ -0.96
CHD6-207ENST00000476641 HEATR3Q7Z4Q2 680 aa9.08□□□□□ -0.96
CHD6-207ENST00000476641 POU5F2Q8N7G0 328 aa9.08□□□□□ -0.96
CHD6-207ENST00000476641 FBLIM1Q8WUP2 373 aa9.08□□□□□ -0.96
CHD6-207ENST00000476641 DHX38Q92620 1227 aaKnown RBP9.08□□□□□ -0.96
CHD6-207ENST00000476641 ALG1Q9BT22 464 aa9.08□□□□□ -0.96
CHD6-207ENST00000476641 MTA3Q9BTC8 594 aa9.08□□□□□ -0.96
CHD6-207ENST00000476641 TTYH1Q9H313 450 aaPredicted RBP9.08□□□□□ -0.96
CHD6-207ENST00000476641 SEC63Q9UGP8 760 aaKnown RBP9.08□□□□□ -0.96
CHD6-207ENST00000476641 SCN10AQ9Y5Y9 1956 aa9.07□□□□□ -0.96
CHD6-207ENST00000476641 CYP26A1O43174 497 aa9.07□□□□□ -0.96
CHD6-207ENST00000476641 ZBTB43O43298 467 aa9.07□□□□□ -0.96
CHD6-207ENST00000476641 GNAQP50148 359 aa9.07□□□□□ -0.96
CHD6-207ENST00000476641 USP11P51784 963 aa9.07□□□□□ -0.96
CHD6-207ENST00000476641 SP4Q02446 784 aa9.07□□□□□ -0.96
CHD6-207ENST00000476641 PPIGQ13427 754 aaKnown RBP eCLIP9.07□□□□□ -0.963e-11■■□□□ 11.9
CHD6-207ENST00000476641 IKBKEQ14164 716 aa9.07□□□□□ -0.96
CHD6-207ENST00000476641 CELF3Q5SZQ8 465 aaKnown RBP9.07□□□□□ -0.96
CHD6-207ENST00000476641 OTOP2Q7RTS6 562 aa9.07□□□□□ -0.96
CHD6-207ENST00000476641 DEFB128Q7Z7B8 93 aa9.07□□□□□ -0.96
CHD6-207ENST00000476641 DHX37Q8IY37 1157 aaKnown RBP9.07□□□□□ -0.96
CHD6-207ENST00000476641 TMTC2Q8N394 836 aa9.07□□□□□ -0.96
CHD6-207ENST00000476641 SMARCC2Q8TAQ2 1214 aa9.07□□□□□ -0.96
CHD6-207ENST00000476641 BRF1Q92994 677 aa9.07□□□□□ -0.96
CHD6-207ENST00000476641 SPATA33Q96N06 139 aa9.07□□□□□ -0.96
CHD6-207ENST00000476641 LZTS2Q9BRK4 669 aa9.07□□□□□ -0.96
CHD6-207ENST00000476641 PSTPIP2Q9H939 334 aa9.07□□□□□ -0.96
CHD6-207ENST00000476641 TMEM260Q9NX78 707 aa9.07□□□□□ -0.96
CHD6-207ENST00000476641 HDAC6Q9UBN7 1215 aa9.07□□□□□ -0.96
CHD6-207ENST00000476641 MYH6P13533 1939 aa9.07□□□□□ -0.96
CHD6-207ENST00000476641 UNC80Q8N2C7 3258 aa9.06□□□□□ -0.96
CHD6-207ENST00000476641 TTC28Q96AY4 2481 aa9.06□□□□□ -0.96
CHD6-207ENST00000476641 ATP9AO75110 1047 aa9.06□□□□□ -0.96
CHD6-207ENST00000476641 RPLP1P05386 114 aaKnown RBP9.06□□□□□ -0.96
CHD6-207ENST00000476641 CALM1P0DP23 149 aa9.06□□□□□ -0.96
CHD6-207ENST00000476641 CALM2P0DP24 149 aa9.06□□□□□ -0.96
CHD6-207ENST00000476641 CALM3P0DP25 149 aa9.06□□□□□ -0.96
CHD6-207ENST00000476641 DRD2P14416 443 aa9.06□□□□□ -0.96
CHD6-207ENST00000476641 ITGB5P18084 799 aa9.06□□□□□ -0.96
CHD6-207ENST00000476641 CASTP20810 708 aaKnown RBP9.06□□□□□ -0.96
CHD6-207ENST00000476641 SMARCA1P28370 1054 aa9.06□□□□□ -0.96
CHD6-207ENST00000476641 COL19A1Q14993 1142 aa9.06□□□□□ -0.96
CHD6-207ENST00000476641 TCTN1Q2MV58 587 aa9.06□□□□□ -0.96
CHD6-207ENST00000476641 BRDTQ58F21 947 aaPredicted RBP9.06□□□□□ -0.96
CHD6-207ENST00000476641 RASIP1Q5U651 963 aa9.06□□□□□ -0.96
CHD6-207ENST00000476641 NFRKBQ6P4R8 1299 aa9.06□□□□□ -0.96
CHD6-207ENST00000476641 XKR5Q6UX68 686 aa9.06□□□□□ -0.96
CHD6-207ENST00000476641 CYFIP1Q7L576 1253 aa9.06□□□□□ -0.96
CHD6-207ENST00000476641 TMEM199Q8N511 208 aa9.06□□□□□ -0.96
CHD6-207ENST00000476641 TMEM102Q8N9M5 508 aaPredicted RBP9.06□□□□□ -0.96
CHD6-207ENST00000476641 PPTC7Q8NI37 304 aa9.06□□□□□ -0.96
CHD6-207ENST00000476641 CYP2W1Q8TAV3 490 aa9.06□□□□□ -0.96
CHD6-207ENST00000476641 BSNDQ8WZ55 320 aa9.06□□□□□ -0.96
CHD6-207ENST00000476641 INPP4AQ96PE3 977 aaPredicted RBP9.06□□□□□ -0.96
CHD6-207ENST00000476641 UIMC1Q96RL1 719 aa9.06□□□□□ -0.96
CHD6-207ENST00000476641 MAF1Q9H063 256 aa9.06□□□□□ -0.96
CHD6-207ENST00000476641 NCOA5Q9HCD5 579 aaKnown RBP9.06□□□□□ -0.96
CHD6-207ENST00000476641 IL23AQ9NPF7 189 aa9.06□□□□□ -0.96
CHD6-207ENST00000476641 MAP3K20Q9NYL2 800 aaKnown RBP9.06□□□□□ -0.96
CHD6-207ENST00000476641 VCANP13611 3396 aa9.05□□□□□ -0.96
CHD6-207ENST00000476641 STXBP3O00186 592 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms