RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 MRPS27Q92552 414 aaKnown RBP11.31□□□□□ -0.6
CCM2-208ENST00000476594 INTS4Q96HW7 963 aaKnown RBP11.31□□□□□ -0.6
CCM2-208ENST00000476594 AK8Q96MA6 479 aa11.31□□□□□ -0.6
CCM2-208ENST00000476594 CDCA3Q99618 268 aaPredicted RBP11.31□□□□□ -0.6
CCM2-208ENST00000476594 ADPGKQ9BRR6 497 aa11.31□□□□□ -0.6
CCM2-208ENST00000476594 TIPINQ9BVW5 301 aa11.31□□□□□ -0.6
CCM2-208ENST00000476594 BHMT2Q9H2M3 363 aa11.31□□□□□ -0.6
CCM2-208ENST00000476594 CWH43Q9H720 699 aa11.31□□□□□ -0.6
CCM2-208ENST00000476594 RSAD1Q9HA92 442 aa11.31□□□□□ -0.6
CCM2-208ENST00000476594 NGRNQ9NPE2 291 aaKnown RBP11.31□□□□□ -0.6
CCM2-208ENST00000476594 ENTPD7Q9NQZ7 604 aa11.31□□□□□ -0.6
CCM2-208ENST00000476594 DDX19AQ9NUU7 478 aaKnown RBP11.31□□□□□ -0.6
CCM2-208ENST00000476594 CLDND1Q9NY35 253 aa11.31□□□□□ -0.6
CCM2-208ENST00000476594 KIAA1024Q9UPX6 916 aa11.31□□□□□ -0.6
CCM2-208ENST00000476594 PCDHB2Q9Y5E7 798 aa11.31□□□□□ -0.6
CCM2-208ENST00000476594 FNDC1Q4ZHG4 1894 aaPredicted RBP11.31□□□□□ -0.6
CCM2-208ENST00000476594 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.3□□□□□ -0.6
CCM2-208ENST00000476594 K7ELQ4 463 aaPredicted RBP11.3□□□□□ -0.6
CCM2-208ENST00000476594 TNFRSF10AO00220 468 aa11.3□□□□□ -0.6
CCM2-208ENST00000476594 TSPAN1O60635 241 aa11.3□□□□□ -0.6
CCM2-208ENST00000476594 ZC3H11AO75152 810 aaKnown RBP eCLIP11.3□□□□□ -0.6
CCM2-208ENST00000476594 CSPG5O95196 566 aa11.3□□□□□ -0.6
CCM2-208ENST00000476594 HSP90AA1P07900 732 aaKnown RBP11.3□□□□□ -0.6
CCM2-208ENST00000476594 NCLP19338 710 aaKnown RBP11.3□□□□□ -0.6
CCM2-208ENST00000476594 TFF2Q03403 129 aa11.3□□□□□ -0.6
CCM2-208ENST00000476594 CLLU1OSQ5K130 101 aa11.3□□□□□ -0.6
CCM2-208ENST00000476594 SLC27A1Q6PCB7 646 aa11.3□□□□□ -0.6
CCM2-208ENST00000476594 MAEAQ7L5Y9 396 aa11.3□□□□□ -0.6
CCM2-208ENST00000476594 RASSF8Q8NHQ8 419 aa11.3□□□□□ -0.6
CCM2-208ENST00000476594 ASAP3Q8TDY4 903 aa11.3□□□□□ -0.6
CCM2-208ENST00000476594 CALML4Q96GE6 196 aa11.3□□□□□ -0.6
CCM2-208ENST00000476594 DRC1Q96MC2 740 aa11.3□□□□□ -0.6
CCM2-208ENST00000476594 CSRNP2Q9H175 543 aa11.3□□□□□ -0.6
CCM2-208ENST00000476594 MINDY3Q9H8M7 445 aa11.3□□□□□ -0.6
CCM2-208ENST00000476594 INPP5FQ9Y2H2 1132 aa11.3□□□□□ -0.6
CCM2-208ENST00000476594 TTC28Q96AY4 2481 aa11.3□□□□□ -0.6
CCM2-208ENST00000476594 ZMYM2Q9UBW7 1377 aa11.29□□□□□ -0.6
CCM2-208ENST00000476594 VWA3AA6NCI4 1184 aa11.29□□□□□ -0.6
CCM2-208ENST00000476594 N4BP3O15049 544 aa11.29□□□□□ -0.6
CCM2-208ENST00000476594 EYA4O95677 639 aa11.29□□□□□ -0.6
CCM2-208ENST00000476594 ATF7P17544 494 aaPredicted RBP11.29□□□□□ -0.6
CCM2-208ENST00000476594 UBA7P41226 1012 aa11.29□□□□□ -0.6
CCM2-208ENST00000476594 NDUFV1P49821 464 aa11.29□□□□□ -0.6
CCM2-208ENST00000476594 MBTD1Q05BQ5 628 aa11.29□□□□□ -0.6
CCM2-208ENST00000476594 DMP1Q13316 513 aaPredicted RBP11.29□□□□□ -0.6
CCM2-208ENST00000476594 GIT2Q14161 759 aa11.29□□□□□ -0.6
CCM2-208ENST00000476594 ZRSR1Q15695 479 aaKnown RBP11.29□□□□□ -0.6
CCM2-208ENST00000476594 FAM187BQ17R55 369 aa11.29□□□□□ -0.6
CCM2-208ENST00000476594 CDCA2Q69YH5 1023 aaPredicted RBP11.29□□□□□ -0.6
CCM2-208ENST00000476594 TMC7Q7Z402 723 aa11.29□□□□□ -0.6
CCM2-208ENST00000476594 MRPL10Q7Z7H8 261 aaKnown RBP11.29□□□□□ -0.6
CCM2-208ENST00000476594 HSCBQ8IWL3 235 aa11.29□□□□□ -0.6
CCM2-208ENST00000476594 RPS6KC1Q96S38 1066 aa11.29□□□□□ -0.6
CCM2-208ENST00000476594 TMEM175Q9BSA9 504 aa11.29□□□□□ -0.6
CCM2-208ENST00000476594 IGFLR1Q9H665 355 aa11.29□□□□□ -0.6
CCM2-208ENST00000476594 TLE6Q9H808 572 aa11.29□□□□□ -0.6
CCM2-208ENST00000476594 C17orf75Q9HAS0 396 aa11.29□□□□□ -0.6
CCM2-208ENST00000476594 RNF19AQ9NV58 838 aa11.29□□□□□ -0.6
CCM2-208ENST00000476594 KCND2Q9NZV8 630 aa11.29□□□□□ -0.6
CCM2-208ENST00000476594 GIT1Q9Y2X7 761 aa11.29□□□□□ -0.6
CCM2-208ENST00000476594 KIAA1671Q9BY89 1806 aa11.28□□□□□ -0.6
CCM2-208ENST00000476594 OFD1O75665 1012 aa11.28□□□□□ -0.6
CCM2-208ENST00000476594 PRKCBP05771 671 aa11.28□□□□□ -0.6
CCM2-208ENST00000476594 BMP1P13497 986 aa11.28□□□□□ -0.6
CCM2-208ENST00000476594 ARF4P18085 180 aaPredicted RBP11.28□□□□□ -0.6
CCM2-208ENST00000476594 HOXA11P31270 313 aaPredicted RBP11.28□□□□□ -0.6
CCM2-208ENST00000476594 CA8P35219 290 aa11.28□□□□□ -0.6
CCM2-208ENST00000476594 LONP1P36776 959 aaKnown RBP11.28□□□□□ -0.6
CCM2-208ENST00000476594 TXLNAP40222 546 aa11.28□□□□□ -0.6
CCM2-208ENST00000476594 KCNQ1P51787 676 aa11.28□□□□□ -0.6
CCM2-208ENST00000476594 BCAR1P56945 870 aa11.28□□□□□ -0.6
CCM2-208ENST00000476594 PRPF4BQ13523 1007 aaKnown RBP11.28□□□□□ -0.6
CCM2-208ENST00000476594 SMC1AQ14683 1233 aaKnown RBP11.28□□□□□ -0.6
CCM2-208ENST00000476594 DCAF4L1Q3SXM0 396 aa11.28□□□□□ -0.6
CCM2-208ENST00000476594 PTCRAQ6ISU1 281 aaPredicted RBP11.28□□□□□ -0.6
CCM2-208ENST00000476594 SLC39A11Q8N1S5 342 aa11.28□□□□□ -0.6
CCM2-208ENST00000476594 EFHBQ8N7U6 833 aa11.28□□□□□ -0.6
CCM2-208ENST00000476594 LPPQ93052 612 aa11.28□□□□□ -0.6
CCM2-208ENST00000476594 TCF25Q9BQ70 676 aa11.28□□□□□ -0.6
CCM2-208ENST00000476594 GBP3Q9H0R5 595 aa11.28□□□□□ -0.6
CCM2-208ENST00000476594 GPRC5CQ9NQ84 441 aa11.28□□□□□ -0.6
CCM2-208ENST00000476594 TBC1D13Q9NVG8 400 aa11.28□□□□□ -0.6
CCM2-208ENST00000476594 IPPQ9Y573 584 aa11.28□□□□□ -0.6
CCM2-208ENST00000476594 GTF3C3Q9Y5Q9 886 aa11.28□□□□□ -0.6
CCM2-208ENST00000476594 BRWD1Q9NSI6 2320 aa11.27□□□□□ -0.6
CCM2-208ENST00000476594 NCOR1O75376 2440 aa11.27□□□□□ -0.6
CCM2-208ENST00000476594 A0A087WWV3 80 aa11.27□□□□□ -0.61
CCM2-208ENST00000476594 A0A1B0GUA9 196 aa11.27□□□□□ -0.61
CCM2-208ENST00000476594 H0YCG3 227 aa11.27□□□□□ -0.61
CCM2-208ENST00000476594 RBAK-RBAKDNI3L0D1 243 aa11.27□□□□□ -0.61
CCM2-208ENST00000476594 ALDH2P05091 517 aa11.27□□□□□ -0.61
CCM2-208ENST00000476594 SSBP05455 408 aaKnown RBP eCLIP11.27□□□□□ -0.61
CCM2-208ENST00000476594 SCP2P22307 547 aa11.27□□□□□ -0.61
CCM2-208ENST00000476594 NRIP1P48552 1158 aa11.27□□□□□ -0.61
CCM2-208ENST00000476594 SMTNP53814 917 aa11.27□□□□□ -0.61
CCM2-208ENST00000476594 HYAL1Q12794 435 aa11.27□□□□□ -0.61
CCM2-208ENST00000476594 COL19A1Q14993 1142 aa11.27□□□□□ -0.61
CCM2-208ENST00000476594 LONRF3Q496Y0 759 aa11.27□□□□□ -0.61
CCM2-208ENST00000476594 HYIQ5T013 277 aa11.27□□□□□ -0.61
CCM2-208ENST00000476594 PLPP4Q5VZY2 271 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms