RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 IGHMBP2P38935 993 aaKnown RBP14.83□□□□□ -0.04
HDAC1-206ENST00000476391 RPL21P46778 160 aaKnown RBP14.83□□□□□ -0.04
HDAC1-206ENST00000476391 ZCWPW2Q504Y3 356 aa14.83□□□□□ -0.04
HDAC1-206ENST00000476391 PHLDB3Q6NSJ2 640 aa14.83□□□□□ -0.04
HDAC1-206ENST00000476391 DSTYKQ6XUX3 929 aa14.83□□□□□ -0.04
HDAC1-206ENST00000476391 CABP7Q86V35 215 aa14.83□□□□□ -0.04
HDAC1-206ENST00000476391 STMN2Q93045 179 aa14.83□□□□□ -0.04
HDAC1-206ENST00000476391 HAUS1Q96CS2 278 aa14.83□□□□□ -0.04
HDAC1-206ENST00000476391 TCP11L1Q9NUJ3 509 aa14.83□□□□□ -0.04
HDAC1-206ENST00000476391 COL4A3BPQ9Y5P4 624 aa14.83□□□□□ -0.04
HDAC1-206ENST00000476391 PVALEFA0A1B0GWK0 134 aa14.82□□□□□ -0.04
HDAC1-206ENST00000476391 CCDC22O60826 627 aa14.82□□□□□ -0.04
HDAC1-206ENST00000476391 SCG2P13521 617 aa14.82□□□□□ -0.04
HDAC1-206ENST00000476391 HSPA6P17066 643 aa14.82□□□□□ -0.04
HDAC1-206ENST00000476391 CHRNA3P32297 505 aa14.82□□□□□ -0.04
HDAC1-206ENST00000476391 RGS2P41220 211 aa14.82□□□□□ -0.04
HDAC1-206ENST00000476391 PTGIRP43119 386 aa14.82□□□□□ -0.04
HDAC1-206ENST00000476391 ITGA9Q13797 1035 aa14.82□□□□□ -0.04
HDAC1-206ENST00000476391 USH1GQ495M9 461 aa14.82□□□□□ -0.04
HDAC1-206ENST00000476391 RFWD3Q6PCD5 774 aa14.82□□□□□ -0.04
HDAC1-206ENST00000476391 CCDC174Q6PII3 467 aa14.82□□□□□ -0.04
HDAC1-206ENST00000476391 CTNNBL1Q8WYA6 563 aaPredicted RBP14.82□□□□□ -0.04
HDAC1-206ENST00000476391 RSPH1Q8WYR4 309 aa14.82□□□□□ -0.04
HDAC1-206ENST00000476391 LRRC59Q96AG4 307 aaKnown RBP14.82□□□□□ -0.04
HDAC1-206ENST00000476391 AGBL1Q96MI9 1066 aa14.82□□□□□ -0.04
HDAC1-206ENST00000476391 PTTG2Q9NZH5 202 aa14.82□□□□□ -0.04
HDAC1-206ENST00000476391 ITGB1BP2Q9UKP3 347 aa14.82□□□□□ -0.04
HDAC1-206ENST00000476391 ACTL7BQ9Y614 415 aa14.82□□□□□ -0.04
HDAC1-206ENST00000476391 ADGRA3Q8IWK6 1321 aa14.82□□□□□ -0.04
HDAC1-206ENST00000476391 WNK3Q9BYP7 1800 aa14.82□□□□□ -0.04
HDAC1-206ENST00000476391 TTLL1O95922 423 aa14.82□□□□□ -0.04
HDAC1-206ENST00000476391 H2AFZP0C0S5 128 aa14.82□□□□□ -0.04
HDAC1-206ENST00000476391 SLC45A4Q5BKX6 768 aa14.82□□□□□ -0.04
HDAC1-206ENST00000476391 RGS9BPQ6ZS82 235 aa14.82□□□□□ -0.04
HDAC1-206ENST00000476391 H2AFVQ71UI9 128 aa14.82□□□□□ -0.04
HDAC1-206ENST00000476391 ZNF571Q7Z3V5 609 aaPredicted RBP14.82□□□□□ -0.04
HDAC1-206ENST00000476391 IRF2BP2Q7Z5L9 587 aa14.82□□□□□ -0.04
HDAC1-206ENST00000476391 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.82□□□□□ -0.042e-7■■■□□ 18.5
HDAC1-206ENST00000476391 ZNF496Q96IT1 587 aaPredicted RBP14.82□□□□□ -0.04
HDAC1-206ENST00000476391 TSPAN18Q96SJ8 248 aa14.82□□□□□ -0.04
HDAC1-206ENST00000476391 MIPEPQ99797 713 aa14.82□□□□□ -0.04
HDAC1-206ENST00000476391 CADM1Q9BY67 442 aaKnown RBP14.82□□□□□ -0.04
HDAC1-206ENST00000476391 TMEM60Q9H2L4 133 aa14.82□□□□□ -0.04
HDAC1-206ENST00000476391 SLC52A2Q9HAB3 445 aa14.82□□□□□ -0.04
HDAC1-206ENST00000476391 ERVK-5Q9HDB9 667 aa14.82□□□□□ -0.04
HDAC1-206ENST00000476391 METTL5Q9NRN9 209 aaKnown RBP14.82□□□□□ -0.04
HDAC1-206ENST00000476391 SUN2Q9UH99 717 aa14.82□□□□□ -0.04
HDAC1-206ENST00000476391 PCYOX1Q9UHG3 505 aa14.82□□□□□ -0.04
HDAC1-206ENST00000476391 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.81□□□□□ -0.04
HDAC1-206ENST00000476391 PHF2O75151 1096 aa14.81□□□□□ -0.04
HDAC1-206ENST00000476391 FOXN2P32314 431 aa14.81□□□□□ -0.04
HDAC1-206ENST00000476391 BTG3Q14201 252 aaPredicted RBP14.81□□□□□ -0.04
HDAC1-206ENST00000476391 RRP1BQ14684 758 aaKnown RBP14.81□□□□□ -0.04
HDAC1-206ENST00000476391 P3H1Q32P28 736 aa14.81□□□□□ -0.04
HDAC1-206ENST00000476391 KBTBD2Q8IY47 623 aa14.81□□□□□ -0.04
HDAC1-206ENST00000476391 HPS3Q969F9 1004 aa14.81□□□□□ -0.04
HDAC1-206ENST00000476391 TUBB6Q9BUF5 446 aa14.81□□□□□ -0.04
HDAC1-206ENST00000476391 SPZ1Q9BXG8 430 aa14.81□□□□□ -0.04
HDAC1-206ENST00000476391 GANQ9H2C0 597 aa14.81□□□□□ -0.04
HDAC1-206ENST00000476391 ANGPTL2Q9UKU9 493 aa14.81□□□□□ -0.04
HDAC1-206ENST00000476391 PHTF1Q9UMS5 762 aa14.81□□□□□ -0.04
HDAC1-206ENST00000476391 NENFQ9UMX5 172 aa14.81□□□□□ -0.04
HDAC1-206ENST00000476391 A8MXQ7 604 aa14.81□□□□□ -0.04
HDAC1-206ENST00000476391 DDX3YO15523 660 aaKnown RBP14.81□□□□□ -0.04
HDAC1-206ENST00000476391 TCEA3O75764 348 aa14.81□□□□□ -0.04
HDAC1-206ENST00000476391 DDAH1O94760 285 aa14.81□□□□□ -0.04
HDAC1-206ENST00000476391 ZWINTO95229 277 aa14.81□□□□□ -0.04
HDAC1-206ENST00000476391 FKBP3Q00688 224 aaKnown RBP14.81□□□□□ -0.04
HDAC1-206ENST00000476391 DSG1Q02413 1049 aa14.81□□□□□ -0.04
HDAC1-206ENST00000476391 TROAPQ12815 778 aa14.81□□□□□ -0.04
HDAC1-206ENST00000476391 TTLL12Q14166 644 aaPredicted RBP14.81□□□□□ -0.04
HDAC1-206ENST00000476391 DDB1Q16531 1140 aa14.81□□□□□ -0.04
HDAC1-206ENST00000476391 CERKLQ49MI3 558 aaPredicted RBP14.81□□□□□ -0.04
HDAC1-206ENST00000476391 CCDC92Q53HC0 331 aaPredicted RBP14.81□□□□□ -0.04
HDAC1-206ENST00000476391 FAM47EQ6ZV65 393 aa14.81□□□□□ -0.04
HDAC1-206ENST00000476391 NCCRP1Q6ZVX7 275 aaPredicted RBP14.81□□□□□ -0.04
HDAC1-206ENST00000476391 CYFIP1Q7L576 1253 aa14.81□□□□□ -0.04
HDAC1-206ENST00000476391 BLIDQ8IZY5 108 aa14.81□□□□□ -0.04
HDAC1-206ENST00000476391 RIBC1Q8N443 379 aaPredicted RBP14.81□□□□□ -0.04
HDAC1-206ENST00000476391 ENAHQ8N8S7 591 aaPredicted RBP14.81□□□□□ -0.04
HDAC1-206ENST00000476391 C7orf43Q8WVR3 580 aa14.81□□□□□ -0.04
HDAC1-206ENST00000476391 ART4Q93070 314 aa14.81□□□□□ -0.04
HDAC1-206ENST00000476391 BTBD10Q9BSF8 475 aa14.81□□□□□ -0.04
HDAC1-206ENST00000476391 SPATA7Q9P0W8 599 aa14.81□□□□□ -0.04
HDAC1-206ENST00000476391 PCDHA3Q9Y5H8 950 aa14.81□□□□□ -0.04
HDAC1-206ENST00000476391 SCN11AQ9UI33 1791 aa14.8□□□□□ -0.04
HDAC1-206ENST00000476391 GFPT2O94808 682 aa14.8□□□□□ -0.04
HDAC1-206ENST00000476391 PIM1P11309 404 aaPredicted RBP14.8□□□□□ -0.04
HDAC1-206ENST00000476391 SERPINB3P29508 390 aa14.8□□□□□ -0.04
HDAC1-206ENST00000476391 PRKCIP41743 596 aa14.8□□□□□ -0.04
HDAC1-206ENST00000476391 CD97P48960 835 aa14.8□□□□□ -0.04
HDAC1-206ENST00000476391 PLOD1Q02809 727 aaPredicted RBP14.8□□□□□ -0.04
HDAC1-206ENST00000476391 PFKFB3Q16875 520 aaPredicted RBP14.8□□□□□ -0.04
HDAC1-206ENST00000476391 IFIT1BQ5T764 474 aaKnown RBP14.8□□□□□ -0.04
HDAC1-206ENST00000476391 DCAF12L1Q5VU92 463 aa14.8□□□□□ -0.04
HDAC1-206ENST00000476391 TSHZ1Q6ZSZ6 1077 aa14.8□□□□□ -0.04
HDAC1-206ENST00000476391 CCDC80Q76M96 950 aa14.8□□□□□ -0.04
HDAC1-206ENST00000476391 MPP4Q96JB8 637 aa14.8□□□□□ -0.04
HDAC1-206ENST00000476391 ZFP69BQ9UJL9 534 aa14.8□□□□□ -0.04
HDAC1-206ENST00000476391 hCG_2014768A0A024R1R8 64 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms