RNA–Protein interactions for RNA: ENST00000475635.1

CCDC57-208, Transcript of coiled-coil domain containing 57, humanhuman

TSL 4

Gene CCDC57, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-208ENST00000475635 ZNF274Q96GC6 653 aaPredicted RBP13.9□□□□□ -0.18
CCDC57-208ENST00000475635 CEP170P1Q96L14 293 aa13.9□□□□□ -0.18
CCDC57-208ENST00000475635 SLKQ9H2G2 1235 aaPredicted RBP13.9□□□□□ -0.18
CCDC57-208ENST00000475635 VAV3Q9UKW4 847 aa13.9□□□□□ -0.18
CCDC57-208ENST00000475635 KCNJ14Q9UNX9 436 aa13.9□□□□□ -0.18
CCDC57-208ENST00000475635 USTQ9Y2C2 406 aa13.9□□□□□ -0.18
CCDC57-208ENST00000475635 CYP46A1Q9Y6A2 500 aa13.9□□□□□ -0.18
CCDC57-208ENST00000475635 TRIP11Q15643 1979 aa13.9□□□□□ -0.18
CCDC57-208ENST00000475635 SPDYE4A6NLX3 237 aa13.89□□□□□ -0.19
CCDC57-208ENST00000475635 GALR2O43603 387 aaPredicted RBP13.89□□□□□ -0.19
CCDC57-208ENST00000475635 DKC1O60832 514 aaKnown RBP eCLIP13.89□□□□□ -0.19
CCDC57-208ENST00000475635 DDHD2O94830 711 aa13.89□□□□□ -0.19
CCDC57-208ENST00000475635 SSBP05455 408 aaKnown RBP eCLIP13.89□□□□□ -0.19
CCDC57-208ENST00000475635 SRGAP2CP0DJJ0 459 aa13.89□□□□□ -0.19
CCDC57-208ENST00000475635 CPLX2Q6PUV4 134 aaKnown RBP13.89□□□□□ -0.19
CCDC57-208ENST00000475635 PLCD3Q8N3E9 789 aa13.89□□□□□ -0.19
CCDC57-208ENST00000475635 TMEM105Q8N8V8 129 aa13.89□□□□□ -0.19
CCDC57-208ENST00000475635 ZNF579Q8NAF0 562 aaKnown RBP13.89□□□□□ -0.19
CCDC57-208ENST00000475635 PRPF31Q8WWY3 499 aaKnown RBP13.89□□□□□ -0.19
CCDC57-208ENST00000475635 PSPC1Q8WXF1 523 aaKnown RBP13.89□□□□□ -0.19
CCDC57-208ENST00000475635 TMEM143Q96AN5 459 aa13.89□□□□□ -0.19
CCDC57-208ENST00000475635 FAM20AQ96MK3 541 aa13.89□□□□□ -0.19
CCDC57-208ENST00000475635 FAM193BQ96PV7 902 aaPredicted RBP13.89□□□□□ -0.19
CCDC57-208ENST00000475635 MINDY3Q9H8M7 445 aa13.89□□□□□ -0.19
CCDC57-208ENST00000475635 SFXN1Q9H9B4 322 aa13.89□□□□□ -0.19
CCDC57-208ENST00000475635 RSAD1Q9HA92 442 aa13.89□□□□□ -0.19
CCDC57-208ENST00000475635 BMP2KQ9NSY1 1161 aaPredicted RBP13.89□□□□□ -0.19
CCDC57-208ENST00000475635 WRAP73Q9P2S5 460 aaPredicted RBP13.89□□□□□ -0.19
CCDC57-208ENST00000475635 CCDC194A0A1B0GVG4 234 aa13.88□□□□□ -0.19
CCDC57-208ENST00000475635 P4HBP07237 508 aaKnown RBP13.88□□□□□ -0.19
CCDC57-208ENST00000475635 KLRC2P26717 231 aa13.88□□□□□ -0.19
CCDC57-208ENST00000475635 RFC5P40937 340 aa13.88□□□□□ -0.19
CCDC57-208ENST00000475635 CLCN4P51793 760 aa13.88□□□□□ -0.19
CCDC57-208ENST00000475635 AFF1P51825 1210 aaKnown RBP13.88□□□□□ -0.19
CCDC57-208ENST00000475635 LAMTOR4Q0VGL1 99 aa13.88□□□□□ -0.19
CCDC57-208ENST00000475635 SRGAP1Q7Z6B7 1085 aa13.88□□□□□ -0.19
CCDC57-208ENST00000475635 MRPL10Q7Z7H8 261 aaKnown RBP13.88□□□□□ -0.19
CCDC57-208ENST00000475635 NEK8Q86SG6 692 aa13.88□□□□□ -0.19
CCDC57-208ENST00000475635 GPR149Q86SP6 731 aa13.88□□□□□ -0.19
CCDC57-208ENST00000475635 EXOC8Q8IYI6 725 aa13.88□□□□□ -0.19
CCDC57-208ENST00000475635 KLHL5Q96PQ7 755 aa13.88□□□□□ -0.19
CCDC57-208ENST00000475635 EMILIN2Q9BXX0 1053 aa13.88□□□□□ -0.19
CCDC57-208ENST00000475635 DHX33Q9H6R0 707 aaKnown RBP13.88□□□□□ -0.19
CCDC57-208ENST00000475635 KCNMB3Q9NPA1 279 aa13.88□□□□□ -0.19
CCDC57-208ENST00000475635 KANSL3Q9P2N6 904 aa13.88□□□□□ -0.19
CCDC57-208ENST00000475635 STK39Q9UEW8 545 aa13.88□□□□□ -0.19
CCDC57-208ENST00000475635 PPME1Q9Y570 386 aa13.88□□□□□ -0.19
CCDC57-208ENST00000475635 CNTNAP2Q9UHC6 1331 aa13.88□□□□□ -0.19
CCDC57-208ENST00000475635 CCNT1O60563 726 aaKnown RBP13.87□□□□□ -0.19
CCDC57-208ENST00000475635 POMCP01189 267 aa13.87□□□□□ -0.19
CCDC57-208ENST00000475635 ALDH2P05091 517 aa13.87□□□□□ -0.19
CCDC57-208ENST00000475635 CNPP09543 421 aaKnown RBP13.87□□□□□ -0.19
CCDC57-208ENST00000475635 GCFC2P16383 781 aaKnown RBP13.87□□□□□ -0.19
CCDC57-208ENST00000475635 HOXA11P31270 313 aaPredicted RBP13.87□□□□□ -0.19
CCDC57-208ENST00000475635 YWHABP31946 246 aaKnown RBP13.87□□□□□ -0.19
CCDC57-208ENST00000475635 UBXN11Q5T124 520 aa13.87□□□□□ -0.19
CCDC57-208ENST00000475635 PPP4R3AQ6IN85 833 aa13.87□□□□□ -0.19
CCDC57-208ENST00000475635 CCDC149Q6ZUS6 474 aa13.87□□□□□ -0.19
CCDC57-208ENST00000475635 HAS1Q92839 578 aa13.87□□□□□ -0.19
CCDC57-208ENST00000475635 ACSF2Q96CM8 615 aaPredicted RBP13.87□□□□□ -0.19
CCDC57-208ENST00000475635 LXNQ9BS40 222 aa13.87□□□□□ -0.19
CCDC57-208ENST00000475635 TMEM175Q9BSA9 504 aa13.87□□□□□ -0.19
CCDC57-208ENST00000475635 PHF20Q9BVI0 1012 aa13.87□□□□□ -0.19
CCDC57-208ENST00000475635 MFSD1Q9H3U5 465 aa13.87□□□□□ -0.19
CCDC57-208ENST00000475635 MRPL17Q9NRX2 175 aaKnown RBP13.87□□□□□ -0.19
CCDC57-208ENST00000475635 FAN1Q9Y2M0 1017 aa13.87□□□□□ -0.19
CCDC57-208ENST00000475635 MYH15Q9Y2K3 1946 aa13.86□□□□□ -0.19
CCDC57-208ENST00000475635 C2CD2LO14523 706 aa13.86□□□□□ -0.19
CCDC57-208ENST00000475635 NRP1O14786 923 aa13.86□□□□□ -0.19
CCDC57-208ENST00000475635 EPB41L2O43491 1005 aaKnown RBP13.86□□□□□ -0.19
CCDC57-208ENST00000475635 LILRB3O75022 631 aa13.86□□□□□ -0.19
CCDC57-208ENST00000475635 CDKL5O76039 1030 aa13.86□□□□□ -0.19
CCDC57-208ENST00000475635 ERLIN2O94905 339 aa13.86□□□□□ -0.19
CCDC57-208ENST00000475635 NCLP19338 710 aaKnown RBP13.86□□□□□ -0.19
CCDC57-208ENST00000475635 EMC2Q15006 297 aa13.86□□□□□ -0.19
CCDC57-208ENST00000475635 EPHA7Q15375 998 aa13.86□□□□□ -0.19
CCDC57-208ENST00000475635 ASTLQ6HA08 431 aaPredicted RBP13.86□□□□□ -0.19
CCDC57-208ENST00000475635 PIK3AP1Q6ZUJ8 805 aa13.86□□□□□ -0.19
CCDC57-208ENST00000475635 OTOP3Q7RTS5 596 aa13.86□□□□□ -0.19
CCDC57-208ENST00000475635 FERMT3Q86UX7 667 aa13.86□□□□□ -0.19
CCDC57-208ENST00000475635 C4orf19Q8IY42 314 aa13.86□□□□□ -0.19
CCDC57-208ENST00000475635 RNF149Q8NC42 400 aa13.86□□□□□ -0.19
CCDC57-208ENST00000475635 TCP11Q8WWU5 503 aa13.86□□□□□ -0.19
CCDC57-208ENST00000475635 TM6SF1Q9BZW5 370 aa13.86□□□□□ -0.19
CCDC57-208ENST00000475635 PDRG1Q9NUG6 133 aa13.86□□□□□ -0.19
CCDC57-208ENST00000475635 RGL1Q9NZL6 768 aa13.86□□□□□ -0.19
CCDC57-208ENST00000475635 PROB1E7EW31 1015 aa13.85□□□□□ -0.19
CCDC57-208ENST00000475635 TBX3O15119 743 aa13.85□□□□□ -0.19
CCDC57-208ENST00000475635 ASAP2O43150 1006 aa13.85□□□□□ -0.19
CCDC57-208ENST00000475635 GAS2O43903 313 aaKnown RBP13.85□□□□□ -0.19
CCDC57-208ENST00000475635 MARCH6O60337 910 aa13.85□□□□□ -0.19
CCDC57-208ENST00000475635 SOD2P04179 222 aa13.85□□□□□ -0.19
CCDC57-208ENST00000475635 URODP06132 367 aa13.85□□□□□ -0.19
CCDC57-208ENST00000475635 ITGA4P13612 1032 aa13.85□□□□□ -0.19
CCDC57-208ENST00000475635 XBP1P17861 261 aa13.85□□□□□ -0.19
CCDC57-208ENST00000475635 SCRN1Q12765 414 aa13.85□□□□□ -0.19
CCDC57-208ENST00000475635 TDGQ13569 410 aa13.85□□□□□ -0.19
CCDC57-208ENST00000475635 CTTNQ14247 550 aaKnown RBP13.85□□□□□ -0.19
CCDC57-208ENST00000475635 XKR9Q5GH70 373 aa13.85□□□□□ -0.19
CCDC57-208ENST00000475635 NCAPH2Q6IBW4 605 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms