RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 PFKFB1P16118 471 aa17.32■□□□□ 0.36
CPSF3-203ENST00000475482 EMC2Q15006 297 aa17.32■□□□□ 0.36
CPSF3-203ENST00000475482 XKR9Q5GH70 373 aa17.32■□□□□ 0.36
CPSF3-203ENST00000475482 CLLU1OSQ5K130 101 aa17.32■□□□□ 0.36
CPSF3-203ENST00000475482 SHC4Q6S5L8 630 aa17.32■□□□□ 0.36
CPSF3-203ENST00000475482 SRGAP1Q7Z6B7 1085 aa17.32■□□□□ 0.36
CPSF3-203ENST00000475482 FMR1NBQ8N0W7 255 aaPredicted RBP17.32■□□□□ 0.36
CPSF3-203ENST00000475482 ENGASEQ8NFI3 743 aa17.32■□□□□ 0.36
CPSF3-203ENST00000475482 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.32■□□□□ 0.36
CPSF3-203ENST00000475482 TCP11Q8WWU5 503 aa17.32■□□□□ 0.36
CPSF3-203ENST00000475482 PSPC1Q8WXF1 523 aaKnown RBP17.32■□□□□ 0.36
CPSF3-203ENST00000475482 TMEM143Q96AN5 459 aa17.32■□□□□ 0.36
CPSF3-203ENST00000475482 CLIC6Q96NY7 704 aa17.32■□□□□ 0.36
CPSF3-203ENST00000475482 CSRNP2Q9H175 543 aa17.32■□□□□ 0.36
CPSF3-203ENST00000475482 CLSTN2Q9H4D0 955 aa17.32■□□□□ 0.36
CPSF3-203ENST00000475482 HCSTQ9UBK5 93 aa17.32■□□□□ 0.36
CPSF3-203ENST00000475482 USP25Q9UHP3 1055 aa17.32■□□□□ 0.36
CPSF3-203ENST00000475482 KCNH3Q9ULD8 1083 aa17.32■□□□□ 0.36
CPSF3-203ENST00000475482 HPSEQ9Y251 543 aa17.32■□□□□ 0.36
CPSF3-203ENST00000475482 POTEMA6NI47 508 aa17.31■□□□□ 0.36
CPSF3-203ENST00000475482 ZNF202O95125 648 aa17.31■□□□□ 0.36
CPSF3-203ENST00000475482 LTBRP36941 435 aa17.31■□□□□ 0.36
CPSF3-203ENST00000475482 PHKA2P46019 1235 aa17.31■□□□□ 0.36
CPSF3-203ENST00000475482 RARRES1P49788 294 aa17.31■□□□□ 0.36
CPSF3-203ENST00000475482 NDUFA8P51970 172 aa17.31■□□□□ 0.36
CPSF3-203ENST00000475482 ZNF445P59923 1031 aa17.31■□□□□ 0.36
CPSF3-203ENST00000475482 UBE3AQ05086 875 aa17.31■□□□□ 0.36
CPSF3-203ENST00000475482 LAMTOR4Q0VGL1 99 aa17.31■□□□□ 0.36
CPSF3-203ENST00000475482 GSE1Q14687 1217 aa17.31■□□□□ 0.36
CPSF3-203ENST00000475482 KANK3Q6NY19 840 aa17.31■□□□□ 0.36
CPSF3-203ENST00000475482 COLGALT1Q8NBJ5 622 aa17.31■□□□□ 0.36
CPSF3-203ENST00000475482 POF1BQ8WVV4 589 aa17.31■□□□□ 0.36
CPSF3-203ENST00000475482 RSPH1Q8WYR4 309 aa17.31■□□□□ 0.36
CPSF3-203ENST00000475482 NLRP4Q96MN2 994 aa17.31■□□□□ 0.36
CPSF3-203ENST00000475482 NECAB3Q96P71 396 aaPredicted RBP17.31■□□□□ 0.36
CPSF3-203ENST00000475482 GOLPH3LQ9H4A5 285 aa17.31■□□□□ 0.36
CPSF3-203ENST00000475482 MINDY3Q9H8M7 445 aa17.31■□□□□ 0.36
CPSF3-203ENST00000475482 AAASQ9NRG9 546 aa17.31■□□□□ 0.36
CPSF3-203ENST00000475482 PCDHB12Q9Y5F1 795 aa17.31■□□□□ 0.36
CPSF3-203ENST00000475482 DGAT1O75907 488 aa17.3■□□□□ 0.36
CPSF3-203ENST00000475482 LAG3P18627 525 aa17.3■□□□□ 0.36
CPSF3-203ENST00000475482 KCNA5P22460 613 aa17.3■□□□□ 0.36
CPSF3-203ENST00000475482 HOXA11P31270 313 aaPredicted RBP17.3■□□□□ 0.36
CPSF3-203ENST00000475482 IRS1P35568 1242 aa17.3■□□□□ 0.36
CPSF3-203ENST00000475482 ARL2P36404 184 aa17.3■□□□□ 0.36
CPSF3-203ENST00000475482 PLCB3Q01970 1234 aa17.3■□□□□ 0.36
CPSF3-203ENST00000475482 POU5F1BQ06416 359 aa17.3■□□□□ 0.36
CPSF3-203ENST00000475482 HYAL1Q12794 435 aa17.3■□□□□ 0.36
CPSF3-203ENST00000475482 SNW1Q13573 536 aaKnown RBP17.3■□□□□ 0.36
CPSF3-203ENST00000475482 CATSPER3Q86XQ3 398 aa17.3■□□□□ 0.36
CPSF3-203ENST00000475482 IFNLR1Q8IU57 520 aaPredicted RBP17.3■□□□□ 0.36
CPSF3-203ENST00000475482 MTRQ99707 1265 aa17.3■□□□□ 0.36
CPSF3-203ENST00000475482 TUFT1Q9NNX1 390 aa17.3■□□□□ 0.36
CPSF3-203ENST00000475482 AGPAT5Q9NUQ2 364 aa17.3■□□□□ 0.36
CPSF3-203ENST00000475482 STK24Q9Y6E0 443 aa17.3■□□□□ 0.36
CPSF3-203ENST00000475482 FGF18O76093 207 aa17.29■□□□□ 0.36
CPSF3-203ENST00000475482 SKIP12755 728 aa17.29■□□□□ 0.36
CPSF3-203ENST00000475482 IBSPP21815 317 aaPredicted RBP17.29■□□□□ 0.36
CPSF3-203ENST00000475482 FXR2P51116 673 aaKnown RBP eCLIP17.29■□□□□ 0.36
CPSF3-203ENST00000475482 PTENP60484 403 aa17.29■□□□□ 0.36
CPSF3-203ENST00000475482 PDIA5Q14554 519 aa17.29■□□□□ 0.36
CPSF3-203ENST00000475482 MXD4Q14582 209 aaPredicted RBP17.29■□□□□ 0.36
CPSF3-203ENST00000475482 PCBP1Q15365 356 aaKnown RBP eCLIP17.29■□□□□ 0.36
CPSF3-203ENST00000475482 CATSPER4Q7RTX7 472 aa17.29■□□□□ 0.36
CPSF3-203ENST00000475482 ELOA2Q8IYF1 753 aaPredicted RBP17.29■□□□□ 0.36
CPSF3-203ENST00000475482 LRRC43Q8N309 656 aa17.29■□□□□ 0.36
CPSF3-203ENST00000475482 POLR3CQ9BUI4 534 aaPredicted RBP17.29■□□□□ 0.36
CPSF3-203ENST00000475482 FAM105AQ9NUU6 356 aa17.29■□□□□ 0.36
CPSF3-203ENST00000475482 CCDC39Q9UFE4 941 aa17.29■□□□□ 0.36
CPSF3-203ENST00000475482 PIN4Q9Y237 131 aaKnown RBP17.29■□□□□ 0.36
CPSF3-203ENST00000475482 LZTS1Q9Y250 596 aa17.29■□□□□ 0.36
CPSF3-203ENST00000475482 SYCE3A1L190 88 aa17.28■□□□□ 0.36
CPSF3-203ENST00000475482 GRXCR2A6NFK2 248 aa17.28■□□□□ 0.36
CPSF3-203ENST00000475482 FSCN2O14926 492 aa17.28■□□□□ 0.36
CPSF3-203ENST00000475482 MED24O75448 989 aa17.28■□□□□ 0.36
CPSF3-203ENST00000475482 SRGAP2CP0DJJ0 459 aa17.28■□□□□ 0.36
CPSF3-203ENST00000475482 RPA1P27694 616 aa17.28■□□□□ 0.36
CPSF3-203ENST00000475482 UBA7P41226 1012 aa17.28■□□□□ 0.36
CPSF3-203ENST00000475482 RAB27AP51159 221 aa17.28■□□□□ 0.36
CPSF3-203ENST00000475482 ADAM15Q13444 863 aa17.28■□□□□ 0.36
CPSF3-203ENST00000475482 PUS10Q3MIT2 529 aaKnown RBP17.28■□□□□ 0.36
CPSF3-203ENST00000475482 TWF2Q6IBS0 349 aaKnown RBP17.28■□□□□ 0.36
CPSF3-203ENST00000475482 ADGRD2Q7Z7M1 963 aa17.28■□□□□ 0.36
CPSF3-203ENST00000475482 RNF149Q8NC42 400 aa17.28■□□□□ 0.36
CPSF3-203ENST00000475482 PIGOQ8TEQ8 1089 aa17.28■□□□□ 0.36
CPSF3-203ENST00000475482 NFKBIZQ9BYH8 718 aa17.28■□□□□ 0.36
CPSF3-203ENST00000475482 BMP2KQ9NSY1 1161 aaPredicted RBP17.28■□□□□ 0.36
CPSF3-203ENST00000475482 DBR1Q9UK59 544 aaKnown RBP17.28■□□□□ 0.36
CPSF3-203ENST00000475482 SLC26A4O43511 780 aa17.27■□□□□ 0.36
CPSF3-203ENST00000475482 MUTP22033 750 aa17.27■□□□□ 0.36
CPSF3-203ENST00000475482 GTF2F1P35269 517 aaKnown RBP eCLIP17.27■□□□□ 0.36
CPSF3-203ENST00000475482 TECP42680 631 aa17.27■□□□□ 0.36
CPSF3-203ENST00000475482 GRIN1Q05586 938 aa17.27■□□□□ 0.36
CPSF3-203ENST00000475482 DLX2Q07687 328 aaPredicted RBP17.27■□□□□ 0.36
CPSF3-203ENST00000475482 UBXN11Q5T124 520 aa17.27■□□□□ 0.36
CPSF3-203ENST00000475482 SPOUT1Q5T280 376 aaKnown RBP17.27■□□□□ 0.36
CPSF3-203ENST00000475482 KCNT2Q6UVM3 1135 aa17.27■□□□□ 0.36
CPSF3-203ENST00000475482 LRSAM1Q6UWE0 723 aa17.27■□□□□ 0.36
CPSF3-203ENST00000475482 MRPL10Q7Z7H8 261 aaKnown RBP17.27■□□□□ 0.36
CPSF3-203ENST00000475482 CEP57L1Q8IYX8 460 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms