RNA–Protein interactions for RNA: ENST00000474996.6

COL2A1-205, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 3

Gene COL2A1, Length 760 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-205ENST00000474996 URGCPQ8TCY9 931 aa16.06■□□□□ 0.16
COL2A1-205ENST00000474996 OXER1Q8TDS5 423 aa16.06■□□□□ 0.16
COL2A1-205ENST00000474996 SLC22A17Q8WUG5 538 aa16.06■□□□□ 0.16
COL2A1-205ENST00000474996 HAS1Q92839 578 aa16.06■□□□□ 0.16
COL2A1-205ENST00000474996 LXNQ9BS40 222 aa16.06■□□□□ 0.16
COL2A1-205ENST00000474996 SMOC2Q9H3U7 446 aa16.06■□□□□ 0.16
COL2A1-205ENST00000474996 SORCS3Q9UPU3 1222 aa16.06■□□□□ 0.16
COL2A1-205ENST00000474996 STK36Q9NRP7 1315 aa16.05■□□□□ 0.16
COL2A1-205ENST00000474996 TBX3O15119 743 aa16.05■□□□□ 0.16
COL2A1-205ENST00000474996 MARCH6O60337 910 aa16.05■□□□□ 0.16
COL2A1-205ENST00000474996 BRD1O95696 1058 aa16.05■□□□□ 0.16
COL2A1-205ENST00000474996 XBP1P17861 261 aa16.05■□□□□ 0.16
COL2A1-205ENST00000474996 HOXA11P31270 313 aaPredicted RBP16.05■□□□□ 0.16
COL2A1-205ENST00000474996 YWHABP31946 246 aaKnown RBP16.05■□□□□ 0.16
COL2A1-205ENST00000474996 LAMTOR4Q0VGL1 99 aa16.05■□□□□ 0.16
COL2A1-205ENST00000474996 EPHA7Q15375 998 aa16.05■□□□□ 0.16
COL2A1-205ENST00000474996 PTPN14Q15678 1187 aa16.05■□□□□ 0.16
COL2A1-205ENST00000474996 ATAT1Q5SQI0 421 aa16.05■□□□□ 0.16
COL2A1-205ENST00000474996 UBXN11Q5T124 520 aa16.05■□□□□ 0.16
COL2A1-205ENST00000474996 NCAPH2Q6IBW4 605 aa16.05■□□□□ 0.16
COL2A1-205ENST00000474996 TMC5Q6UXY8 1006 aa16.05■□□□□ 0.16
COL2A1-205ENST00000474996 MRPL10Q7Z7H8 261 aaKnown RBP16.05■□□□□ 0.16
COL2A1-205ENST00000474996 CABP7Q86V35 215 aa16.05■□□□□ 0.16
COL2A1-205ENST00000474996 POTEDQ86YR6 584 aa16.05■□□□□ 0.16
COL2A1-205ENST00000474996 C4orf19Q8IY42 314 aa16.05■□□□□ 0.16
COL2A1-205ENST00000474996 EXOC8Q8IYI6 725 aa16.05■□□□□ 0.16
COL2A1-205ENST00000474996 RSAD1Q9HA92 442 aa16.05■□□□□ 0.16
COL2A1-205ENST00000474996 RGL1Q9NZL6 768 aa16.05■□□□□ 0.16
COL2A1-205ENST00000474996 DBR1Q9UK59 544 aaKnown RBP16.05■□□□□ 0.16
COL2A1-205ENST00000474996 PPME1Q9Y570 386 aa16.05■□□□□ 0.16
COL2A1-205ENST00000474996 DENND4AQ7Z401 1863 aa16.05■□□□□ 0.16
COL2A1-205ENST00000474996 CACNA1HO95180 2353 aa16.04■□□□□ 0.16
COL2A1-205ENST00000474996 POMCP01189 267 aa16.04■□□□□ 0.16
COL2A1-205ENST00000474996 SSBP05455 408 aaKnown RBP eCLIP16.04■□□□□ 0.16
COL2A1-205ENST00000474996 ASGR2P07307 311 aa16.04■□□□□ 0.16
COL2A1-205ENST00000474996 CYP4A11Q02928 519 aa16.04■□□□□ 0.16
COL2A1-205ENST00000474996 CTTNQ14247 550 aaKnown RBP16.04■□□□□ 0.16
COL2A1-205ENST00000474996 EMC2Q15006 297 aa16.04■□□□□ 0.16
COL2A1-205ENST00000474996 XKR9Q5GH70 373 aa16.04■□□□□ 0.16
COL2A1-205ENST00000474996 EARS2Q5JPH6 523 aaKnown RBP16.04■□□□□ 0.16
COL2A1-205ENST00000474996 UBALD2Q8IYN6 164 aa16.04■□□□□ 0.16
COL2A1-205ENST00000474996 TDRD5Q8NAT2 981 aaKnown RBP16.04■□□□□ 0.16
COL2A1-205ENST00000474996 RNF149Q8NC42 400 aa16.04■□□□□ 0.16
COL2A1-205ENST00000474996 TCP11Q8WWU5 503 aa16.04■□□□□ 0.16
COL2A1-205ENST00000474996 DYDC2Q96IM9 177 aa16.04■□□□□ 0.16
COL2A1-205ENST00000474996 FAM193BQ96PV7 902 aaPredicted RBP16.04■□□□□ 0.16
COL2A1-205ENST00000474996 FAM86C1Q9NVL1 165 aa16.04■□□□□ 0.16
COL2A1-205ENST00000474996 TPCN1Q9ULQ1 816 aa16.04■□□□□ 0.16
COL2A1-205ENST00000474996 CNTNAP2Q9UHC6 1331 aa16.03■□□□□ 0.16
COL2A1-205ENST00000474996 FAM205CA6NFA0 338 aa16.03■□□□□ 0.16
COL2A1-205ENST00000474996 ZBTB39O15060 712 aa16.03■□□□□ 0.16
COL2A1-205ENST00000474996 SPIRE1Q08AE8 756 aa16.03■□□□□ 0.16
COL2A1-205ENST00000474996 OTUD6AQ7L8S5 288 aa16.03■□□□□ 0.16
COL2A1-205ENST00000474996 FERMT3Q86UX7 667 aa16.03■□□□□ 0.16
COL2A1-205ENST00000474996 PPFIBP1Q86W92 1011 aa16.03■□□□□ 0.16
COL2A1-205ENST00000474996 ZDHHC14Q8IZN3 488 aa16.03■□□□□ 0.16
COL2A1-205ENST00000474996 KLHL5Q96PQ7 755 aa16.03■□□□□ 0.16
COL2A1-205ENST00000474996 NAP1L4Q99733 375 aaKnown RBP16.03■□□□□ 0.16
COL2A1-205ENST00000474996 TMEM175Q9BSA9 504 aa16.03■□□□□ 0.16
COL2A1-205ENST00000474996 ZSWIM4Q9H7M6 989 aa16.03■□□□□ 0.16
COL2A1-205ENST00000474996 SFXN1Q9H9B4 322 aa16.03■□□□□ 0.16
COL2A1-205ENST00000474996 KANSL3Q9P2N6 904 aa16.03■□□□□ 0.16
COL2A1-205ENST00000474996 LIMD1Q9UGP4 676 aa16.03■□□□□ 0.16
COL2A1-205ENST00000474996 FAN1Q9Y2M0 1017 aa16.03■□□□□ 0.16
COL2A1-205ENST00000474996 C2orf16Q68DN1 1984 aa16.03■□□□□ 0.16
COL2A1-205ENST00000474996 SPDYE4A6NLX3 237 aa16.02■□□□□ 0.16
COL2A1-205ENST00000474996 NRP1O14786 923 aa16.02■□□□□ 0.16
COL2A1-205ENST00000474996 ASAP2O43150 1006 aa16.02■□□□□ 0.16
COL2A1-205ENST00000474996 GAS2O43903 313 aaKnown RBP16.02■□□□□ 0.16
COL2A1-205ENST00000474996 PFKFB2O60825 505 aa16.02■□□□□ 0.16
COL2A1-205ENST00000474996 ERLIN2O94905 339 aa16.02■□□□□ 0.16
COL2A1-205ENST00000474996 CTDNEP1O95476 244 aa16.02■□□□□ 0.16
COL2A1-205ENST00000474996 ALDH2P05091 517 aa16.02■□□□□ 0.16
COL2A1-205ENST00000474996 CNPP09543 421 aaKnown RBP16.02■□□□□ 0.16
COL2A1-205ENST00000474996 NCLP19338 710 aaKnown RBP16.02■□□□□ 0.16
COL2A1-205ENST00000474996 KLRC2P26717 231 aa16.02■□□□□ 0.16
COL2A1-205ENST00000474996 CLCN4P51793 760 aa16.02■□□□□ 0.16
COL2A1-205ENST00000474996 TPH2Q8IWU9 490 aa16.02■□□□□ 0.16
COL2A1-205ENST00000474996 SLFN12Q8IYM2 578 aa16.02■□□□□ 0.16
COL2A1-205ENST00000474996 SMG8Q8ND04 991 aaKnown RBP16.02■□□□□ 0.16
COL2A1-205ENST00000474996 MTRQ99707 1265 aa16.02■□□□□ 0.16
COL2A1-205ENST00000474996 EMILIN2Q9BXX0 1053 aa16.02■□□□□ 0.16
COL2A1-205ENST00000474996 EIF2AQ9BY44 585 aaKnown RBP16.02■□□□□ 0.16
COL2A1-205ENST00000474996 ORC3Q9UBD5 711 aaPredicted RBP16.02■□□□□ 0.16
COL2A1-205ENST00000474996 STK39Q9UEW8 545 aa16.02■□□□□ 0.16
COL2A1-205ENST00000474996 USTQ9Y2C2 406 aa16.02■□□□□ 0.16
COL2A1-205ENST00000474996 USP34Q70CQ2 3546 aa16.02■□□□□ 0.15
COL2A1-205ENST00000474996 TDRD15B5MCY1 1934 aaKnown RBP16.02■□□□□ 0.15
COL2A1-205ENST00000474996 C2CD2LO14523 706 aa16.01■□□□□ 0.15
COL2A1-205ENST00000474996 TSPAN1O60635 241 aa16.01■□□□□ 0.15
COL2A1-205ENST00000474996 LILRB3O75022 631 aa16.01■□□□□ 0.15
COL2A1-205ENST00000474996 BAG4O95429 457 aaKnown RBP16.01■□□□□ 0.15
COL2A1-205ENST00000474996 ITGA4P13612 1032 aa16.01■□□□□ 0.15
COL2A1-205ENST00000474996 NR5A1Q13285 461 aa16.01■□□□□ 0.15
COL2A1-205ENST00000474996 GPR149Q86SP6 731 aa16.01■□□□□ 0.15
COL2A1-205ENST00000474996 PLCD3Q8N3E9 789 aa16.01■□□□□ 0.15
COL2A1-205ENST00000474996 CNNM3Q8NE01 707 aa16.01■□□□□ 0.15
COL2A1-205ENST00000474996 XPNPEP1Q9NQW7 623 aa16.01■□□□□ 0.15
COL2A1-205ENST00000474996 MRPL17Q9NRX2 175 aaKnown RBP16.01■□□□□ 0.15
COL2A1-205ENST00000474996 MARCH5Q9NX47 278 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms