RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 CFAP61Q8NHU2 1237 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 SLC16A10Q8TF71 515 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 PTPRN2Q92932 1015 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 ARL8AQ96BM9 186 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 CDC5LQ99459 802 aaKnown RBP5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 OSBPL10Q9BXB5 764 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 FTOQ9C0B1 505 aaKnown RBP eCLIP5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 RHBDL2Q9NX52 303 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 SUCLA2Q9P2R7 463 aaPredicted RBP5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 SCOCQ9UIL1 159 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 SPO11Q9Y5K1 396 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 TACC3Q9Y6A5 838 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 COMMD3-BMI1R4GMX3 469 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 LOC100289279A0A1B0GTE1 492 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 HTR3EA5X5Y0 456 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 PRPF3O43395 683 aaKnown RBP5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 TRAPPC3O43617 180 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 HNRNPCP07910 306 aaKnown RBP eCLIP5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 PDGFRBP09619 1106 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 PCK1P35558 622 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 TCF7P36402 384 aaPredicted RBP5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 SEC24CP53992 1094 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 MRPS25P82663 173 aaKnown RBP5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 PDE4BQ07343 736 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 DPCR1Q3MIW9 517 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 SMUG1Q53HV7 270 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 SPECC1LQ69YQ0 1117 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 TMEM53Q6P2H8 277 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 TMEM154Q6P9G4 183 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 RUFY4Q6ZNE9 571 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 CYFIP1Q7L576 1253 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 RASGRP2Q7LDG7 609 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 MAP4K3Q8IVH8 894 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 SLC35F6Q8N357 371 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 DEPTORQ8TB45 409 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 WDR60Q8WVS4 1066 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 CATSPER2Q96P56 530 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 PLEKHF1Q96S99 279 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 CGREF1Q99674 301 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 TIPINQ9BVW5 301 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 CARD9Q9H257 536 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 LZTFL1Q9NQ48 299 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 PANK4Q9NVE7 773 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 TBCCD1Q9NVR7 557 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 CORINQ9Y5Q5 1042 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 ZNF335Q9H4Z2 1342 aaPredicted RBP5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 CHD4Q14839 1912 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 TRIM43BA6NCK2 446 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 IFIT3O14879 490 aaKnown RBP5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 ADAM11O75078 769 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 LARGE1O95461 756 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 PAEPP09466 180 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 NAT2P11245 290 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 TNFRSF8P28908 595 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 LACTBP83111 547 aaPredicted RBP5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 PDE1BQ01064 536 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 MYL5Q02045 173 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 PLOD1Q02809 727 aaPredicted RBP5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 MAP3K12Q12852 859 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 TCEAL1Q15170 157 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 CFAP58Q5T655 872 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 TBC1D9BQ66K14 1250 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 FAM173BQ6P4H8 233 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 TRAPPC11Q7Z392 1133 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 ANKS4BQ8N8V4 417 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 MLKLQ8NB16 471 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 GDAP1L1Q96MZ0 367 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 HAPLN3Q96S86 360 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 SDF4Q9BRK5 362 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 ATP8A2Q9NTI2 1148 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 FANCLQ9NW38 375 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 CTTNBP2NLQ9P2B4 639 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 PDP2Q9P2J9 529 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 HESX1Q9UBX0 185 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 RGS17Q9UGC6 210 aaPredicted RBP5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 OVOS2A0A0G2JMS6 1433 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 OVOS2A0A0J9YW53 1432 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 OVOS2Q6IE36 1432 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 SALL3Q9BXA9 1300 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 NQO1P15559 274 aaKnown RBP5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 GBP1P32455 592 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 CLCN2P51788 898 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 RESTQ13127 1097 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 LSAMPQ13449 338 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 ITIH4Q14624 930 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 LONRF3Q496Y0 759 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 DMRTC2Q8IXT2 367 aaPredicted RBP5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 TMEM40Q8WWA1 233 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 IFT81Q8WYA0 676 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 IRF7Q92985 503 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 HIC2Q96JB3 615 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 CLMNQ96JQ2 1002 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 C8orf76Q96K31 380 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 ATP6V1G3Q96LB4 118 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 SEC62Q99442 399 aaKnown RBP5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 TM9SF2Q99805 663 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 DESI2Q9BSY9 194 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 DKK3Q9UBP4 350 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms