RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 DGAT1O75907 488 aa15.11■□□□□ 0.01
CHD3-209ENST00000473376 ALDH2P05091 517 aa15.11■□□□□ 0.01
CHD3-209ENST00000473376 KRT2P35908 639 aa15.11■□□□□ 0.01
CHD3-209ENST00000473376 PTPN5P54829 565 aa15.11■□□□□ 0.01
CHD3-209ENST00000473376 NPEPPSP55786 919 aa15.11■□□□□ 0.01
CHD3-209ENST00000473376 TFDP1Q14186 410 aa15.11■□□□□ 0.01
CHD3-209ENST00000473376 ATAT1Q5SQI0 421 aa15.11■□□□□ 0.01
CHD3-209ENST00000473376 PLA2G4FQ68DD2 849 aa15.11■□□□□ 0.01
CHD3-209ENST00000473376 KIAA1841Q6NSI8 718 aa15.11■□□□□ 0.01
CHD3-209ENST00000473376 AGMOQ6ZNB7 445 aa15.11■□□□□ 0.01
CHD3-209ENST00000473376 KSR1Q8IVT5 923 aa15.11■□□□□ 0.01
CHD3-209ENST00000473376 ZDHHC14Q8IZN3 488 aa15.11■□□□□ 0.01
CHD3-209ENST00000473376 TMEM87AQ8NBN3 555 aa15.11■□□□□ 0.01
CHD3-209ENST00000473376 SLC22A17Q8WUG5 538 aa15.11■□□□□ 0.01
CHD3-209ENST00000473376 MTRQ99707 1265 aa15.11■□□□□ 0.01
CHD3-209ENST00000473376 SH2D3AQ9BRG2 576 aa15.11■□□□□ 0.01
CHD3-209ENST00000473376 EMILIN2Q9BXX0 1053 aa15.11■□□□□ 0.01
CHD3-209ENST00000473376 RSAD1Q9HA92 442 aa15.11■□□□□ 0.01
CHD3-209ENST00000473376 WRAP73Q9P2S5 460 aaPredicted RBP15.11■□□□□ 0.01
CHD3-209ENST00000473376 DPP7Q9UHL4 492 aa15.11■□□□□ 0.01
CHD3-209ENST00000473376 PCDHA12Q9UN75 941 aa15.11■□□□□ 0.01
CHD3-209ENST00000473376 SLITRK3O94933 977 aa15.1■□□□□ 0.01
CHD3-209ENST00000473376 CTDNEP1O95476 244 aa15.1■□□□□ 0.01
CHD3-209ENST00000473376 PTENP60484 403 aa15.1■□□□□ 0.01
CHD3-209ENST00000473376 EMC2Q15006 297 aa15.1■□□□□ 0.01
CHD3-209ENST00000473376 NOTUMQ6P988 496 aa15.1■□□□□ 0.01
CHD3-209ENST00000473376 C15orf39Q6ZRI6 1047 aa15.1■□□□□ 0.01
CHD3-209ENST00000473376 RNF149Q8NC42 400 aa15.1■□□□□ 0.01
CHD3-209ENST00000473376 LARP6Q9BRS8 491 aaKnown RBP15.1■□□□□ 0.01
CHD3-209ENST00000473376 SORCS3Q9UPU3 1222 aa15.1■□□□□ 0.01
CHD3-209ENST00000473376 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.09■□□□□ 0.01
CHD3-209ENST00000473376 LILRB3O75022 631 aa15.09■□□□□ 0.01
CHD3-209ENST00000473376 ERLIN2O94905 339 aa15.09■□□□□ 0.01
CHD3-209ENST00000473376 PAPLNO95428 1278 aa15.09■□□□□ 0.01
CHD3-209ENST00000473376 SRGAP2CP0DJJ0 459 aa15.09■□□□□ 0.01
CHD3-209ENST00000473376 FDPSP14324 419 aaKnown RBP15.09■□□□□ 0.01
CHD3-209ENST00000473376 MTMR3Q13615 1198 aa15.09■□□□□ 0.01
CHD3-209ENST00000473376 XKR9Q5GH70 373 aa15.09■□□□□ 0.01
CHD3-209ENST00000473376 UBXN11Q5T124 520 aa15.09■□□□□ 0.01
CHD3-209ENST00000473376 LLGL2Q6P1M3 1020 aa15.09■□□□□ 0.01
CHD3-209ENST00000473376 ELMSAN1Q6PJG2 1045 aa15.09■□□□□ 0.01
CHD3-209ENST00000473376 TMEM173Q86WV6 379 aaPredicted RBP15.09■□□□□ 0.01
CHD3-209ENST00000473376 POTEDQ86YR6 584 aa15.09■□□□□ 0.01
CHD3-209ENST00000473376 HACE1Q8IYU2 909 aa15.09■□□□□ 0.01
CHD3-209ENST00000473376 ZNF579Q8NAF0 562 aaKnown RBP15.09■□□□□ 0.01
CHD3-209ENST00000473376 OXER1Q8TDS5 423 aa15.09■□□□□ 0.01
CHD3-209ENST00000473376 LPPQ93052 612 aa15.09■□□□□ 0.01
CHD3-209ENST00000473376 GTF3C6Q969F1 213 aa15.09■□□□□ 0.01
CHD3-209ENST00000473376 TMEM143Q96AN5 459 aa15.09■□□□□ 0.01
CHD3-209ENST00000473376 FAM193BQ96PV7 902 aaPredicted RBP15.09■□□□□ 0.01
CHD3-209ENST00000473376 MINDY3Q9H8M7 445 aa15.09■□□□□ 0.01
CHD3-209ENST00000473376 SFXN1Q9H9B4 322 aa15.09■□□□□ 0.01
CHD3-209ENST00000473376 RGL1Q9NZL6 768 aa15.09■□□□□ 0.01
CHD3-209ENST00000473376 FAN1Q9Y2M0 1017 aa15.09■□□□□ 0.01
CHD3-209ENST00000473376 NT5C1B-RDH14C9J2C7 533 aa15.08■□□□□ 0
CHD3-209ENST00000473376 EFEMP2O95967 443 aa15.08■□□□□ 0
CHD3-209ENST00000473376 SLC11A1P49279 550 aa15.08■□□□□ 0
CHD3-209ENST00000473376 MRE11P49959 708 aa15.08■□□□□ 0
CHD3-209ENST00000473376 AK2P54819 239 aa15.08■□□□□ 0
CHD3-209ENST00000473376 ORC2Q13416 577 aaPredicted RBP15.08■□□□□ 0
CHD3-209ENST00000473376 PTPN14Q15678 1187 aa15.08■□□□□ 0
CHD3-209ENST00000473376 NCAPH2Q6IBW4 605 aa15.08■□□□□ 0
CHD3-209ENST00000473376 ALYREFQ86V81 257 aaKnown RBP15.08■□□□□ 0
CHD3-209ENST00000473376 ZNF280BQ86YH2 543 aa15.08■□□□□ 0
CHD3-209ENST00000473376 RNF168Q8IYW5 571 aaPredicted RBP15.08■□□□□ 0
CHD3-209ENST00000473376 CMASQ8NFW8 434 aaPredicted RBP15.08■□□□□ 0
CHD3-209ENST00000473376 HDAC7Q8WUI4 952 aa15.08■□□□□ 0
CHD3-209ENST00000473376 DYDC2Q96IM9 177 aa15.08■□□□□ 0
CHD3-209ENST00000473376 MTMR9Q96QG7 549 aa15.08■□□□□ 0
CHD3-209ENST00000473376 EIF2AK1Q9BQI3 630 aaKnown RBP15.08■□□□□ 0
CHD3-209ENST00000473376 CSRNP2Q9H175 543 aa15.08■□□□□ 0
CHD3-209ENST00000473376 POMKQ9H5K3 350 aa15.08■□□□□ 0
CHD3-209ENST00000473376 MRPL17Q9NRX2 175 aaKnown RBP15.08■□□□□ 0
CHD3-209ENST00000473376 GIT1Q9Y2X7 761 aa15.08■□□□□ 0
CHD3-209ENST00000473376 MEIS3P2A8K0S8 358 aa15.07■□□□□ 0
CHD3-209ENST00000473376 NR1I2O75469 434 aa15.07■□□□□ 0
CHD3-209ENST00000473376 SOD2P04179 222 aa15.07■□□□□ 0
CHD3-209ENST00000473376 NEFLP07196 543 aa15.07■□□□□ 0
CHD3-209ENST00000473376 ITGA4P13612 1032 aa15.07■□□□□ 0
CHD3-209ENST00000473376 ARL2P36404 184 aa15.07■□□□□ 0
CHD3-209ENST00000473376 DSC1Q08554 894 aa15.07■□□□□ 0
CHD3-209ENST00000473376 CALCRLQ16602 461 aa15.07■□□□□ 0
CHD3-209ENST00000473376 GPR149Q86SP6 731 aa15.07■□□□□ 0
CHD3-209ENST00000473376 CABP7Q86V35 215 aa15.07■□□□□ 0
CHD3-209ENST00000473376 TPH2Q8IWU9 490 aa15.07■□□□□ 0
CHD3-209ENST00000473376 SMG8Q8ND04 991 aaKnown RBP15.07■□□□□ 0
CHD3-209ENST00000473376 PRIMPOLQ96LW4 560 aa15.07■□□□□ 0
CHD3-209ENST00000473376 TTC12Q9H892 705 aaPredicted RBP15.07■□□□□ 0
CHD3-209ENST00000473376 XPNPEP1Q9NQW7 623 aa15.07■□□□□ 0
CHD3-209ENST00000473376 DNAJB4Q9UDY4 337 aa15.07■□□□□ 0
CHD3-209ENST00000473376 INPP5FQ9Y2H2 1132 aa15.07■□□□□ 0
CHD3-209ENST00000473376 NRP1O14786 923 aa15.06■□□□□ 0
CHD3-209ENST00000473376 NEMFO60524 1076 aa15.06■□□□□ 0
CHD3-209ENST00000473376 TSPAN1O60635 241 aa15.06■□□□□ 0
CHD3-209ENST00000473376 DDHD2O94830 711 aa15.06■□□□□ 0
CHD3-209ENST00000473376 MUTP22033 750 aa15.06■□□□□ 0
CHD3-209ENST00000473376 AVPR2P30518 371 aa15.06■□□□□ 0
CHD3-209ENST00000473376 RARRES1P49788 294 aa15.06■□□□□ 0
CHD3-209ENST00000473376 CLCN4P51793 760 aa15.06■□□□□ 0
CHD3-209ENST00000473376 NR5A1Q13285 461 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms