RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 TECTAO75443 2155 aa7.78□□□□□ -1.16
CKS1B-205ENST00000473344 ESYT2A0FGR8 921 aa7.78□□□□□ -1.16
CKS1B-205ENST00000473344 PRR23AA6NEV1 266 aa7.78□□□□□ -1.16
CKS1B-205ENST00000473344 GAS7O60861 476 aa7.78□□□□□ -1.16
CKS1B-205ENST00000473344 CTSAP10619 480 aa7.78□□□□□ -1.16
CKS1B-205ENST00000473344 CDC27P30260 824 aa7.78□□□□□ -1.16
CKS1B-205ENST00000473344 ADD1P35611 737 aaKnown RBP7.78□□□□□ -1.16
CKS1B-205ENST00000473344 NBL1P41271 181 aa7.78□□□□□ -1.16
CKS1B-205ENST00000473344 PHKA2P46019 1235 aa7.78□□□□□ -1.16
CKS1B-205ENST00000473344 CLCN5P51795 746 aa7.78□□□□□ -1.16
CKS1B-205ENST00000473344 JAK3P52333 1124 aa7.78□□□□□ -1.16
CKS1B-205ENST00000473344 RCAN1P53805 252 aa7.78□□□□□ -1.16
CKS1B-205ENST00000473344 POLGP54098 1239 aaPredicted RBP7.78□□□□□ -1.16
CKS1B-205ENST00000473344 LONRF3Q496Y0 759 aa7.78□□□□□ -1.16
CKS1B-205ENST00000473344 LRCH2Q5VUJ6 765 aa7.78□□□□□ -1.16
CKS1B-205ENST00000473344 TMC5Q6UXY8 1006 aa7.78□□□□□ -1.16
CKS1B-205ENST00000473344 CCDC149Q6ZUS6 474 aa7.78□□□□□ -1.16
CKS1B-205ENST00000473344 CRYGNQ8WXF5 182 aa7.78□□□□□ -1.16
CKS1B-205ENST00000473344 AUTS2Q8WXX7 1259 aa7.78□□□□□ -1.16
CKS1B-205ENST00000473344 TMUB1Q9BVT8 246 aa7.78□□□□□ -1.16
CKS1B-205ENST00000473344 TEKT3Q9BXF9 490 aa7.78□□□□□ -1.16
CKS1B-205ENST00000473344 EMILIN2Q9BXX0 1053 aa7.78□□□□□ -1.16
CKS1B-205ENST00000473344 GBP3Q9H0R5 595 aa7.78□□□□□ -1.16
CKS1B-205ENST00000473344 ZBP1Q9H171 429 aa7.78□□□□□ -1.16
CKS1B-205ENST00000473344 SMOC2Q9H3U7 446 aa7.78□□□□□ -1.16
CKS1B-205ENST00000473344 SFXN1Q9H9B4 322 aa7.78□□□□□ -1.16
CKS1B-205ENST00000473344 CYP26B1Q9NR63 512 aa7.78□□□□□ -1.16
CKS1B-205ENST00000473344 STK39Q9UEW8 545 aa7.78□□□□□ -1.16
CKS1B-205ENST00000473344 FBXL21Q9UKT6 434 aa7.78□□□□□ -1.16
CKS1B-205ENST00000473344 PIN4Q9Y237 131 aaKnown RBP7.78□□□□□ -1.16
CKS1B-205ENST00000473344 INPP5FQ9Y2H2 1132 aa7.78□□□□□ -1.16
CKS1B-205ENST00000473344 ZNF318Q5VUA4 2279 aa7.78□□□□□ -1.16
CKS1B-205ENST00000473344 DCHS1Q96JQ0 3298 aa7.77□□□□□ -1.16
CKS1B-205ENST00000473344 KMT2EQ8IZD2 1858 aa7.77□□□□□ -1.17
CKS1B-205ENST00000473344 A0A087WZ62 844 aa7.77□□□□□ -1.17
CKS1B-205ENST00000473344 SMAPO00193 183 aa7.77□□□□□ -1.17
CKS1B-205ENST00000473344 ZNF862O60290 1169 aa7.77□□□□□ -1.17
CKS1B-205ENST00000473344 CSDE1O75534 798 aaKnown RBP7.77□□□□□ -1.17
CKS1B-205ENST00000473344 EPCAMP16422 314 aa7.77□□□□□ -1.17
CKS1B-205ENST00000473344 RFX1P22670 979 aa7.77□□□□□ -1.17
CKS1B-205ENST00000473344 KLRC2P26717 231 aa7.77□□□□□ -1.17
CKS1B-205ENST00000473344 CIITAP33076 1130 aa7.77□□□□□ -1.17
CKS1B-205ENST00000473344 EXOSC10Q01780 885 aaKnown RBP7.77□□□□□ -1.17
CKS1B-205ENST00000473344 TDGQ13569 410 aa7.77□□□□□ -1.17
CKS1B-205ENST00000473344 BECN1Q14457 450 aa7.77□□□□□ -1.17
CKS1B-205ENST00000473344 MTERF2Q49AM1 385 aa7.77□□□□□ -1.17
CKS1B-205ENST00000473344 NOMO2Q5JPE7 1267 aa7.77□□□□□ -1.17
CKS1B-205ENST00000473344 KANK3Q6NY19 840 aa7.77□□□□□ -1.17
CKS1B-205ENST00000473344 ELMSAN1Q6PJG2 1045 aa7.77□□□□□ -1.17
CKS1B-205ENST00000473344 NUDT18Q6ZVK8 323 aa7.77□□□□□ -1.17
CKS1B-205ENST00000473344 OTOP3Q7RTS5 596 aa7.77□□□□□ -1.17
CKS1B-205ENST00000473344 CATSPER4Q7RTX7 472 aa7.77□□□□□ -1.17
CKS1B-205ENST00000473344 FRMD5Q7Z6J6 570 aa7.77□□□□□ -1.17
CKS1B-205ENST00000473344 DDX53Q86TM3 631 aaKnown RBP7.77□□□□□ -1.17
CKS1B-205ENST00000473344 ZNF598Q86UK7 904 aaKnown RBP7.77□□□□□ -1.17
CKS1B-205ENST00000473344 RHPN2Q8IUC4 686 aa7.77□□□□□ -1.17
CKS1B-205ENST00000473344 LINC01465Q8N7H1 131 aa7.77□□□□□ -1.17
CKS1B-205ENST00000473344 CCDC148Q8NFR7 591 aa7.77□□□□□ -1.17
CKS1B-205ENST00000473344 URGCPQ8TCY9 931 aa7.77□□□□□ -1.17
CKS1B-205ENST00000473344 LPPQ93052 612 aa7.77□□□□□ -1.17
CKS1B-205ENST00000473344 PGBD4Q96DM1 585 aa7.77□□□□□ -1.17
CKS1B-205ENST00000473344 IGSF21Q96ID5 467 aa7.77□□□□□ -1.17
CKS1B-205ENST00000473344 FAM193BQ96PV7 902 aaPredicted RBP7.77□□□□□ -1.17
CKS1B-205ENST00000473344 RIT2Q99578 217 aa7.77□□□□□ -1.17
CKS1B-205ENST00000473344 FDXACB1Q9BRP7 624 aaPredicted RBP7.77□□□□□ -1.17
CKS1B-205ENST00000473344 PDCL3Q9H2J4 239 aa7.77□□□□□ -1.17
CKS1B-205ENST00000473344 FAM105AQ9NUU6 356 aa7.77□□□□□ -1.17
CKS1B-205ENST00000473344 DPP7Q9UHL4 492 aa7.77□□□□□ -1.17
CKS1B-205ENST00000473344 IRAK3Q9Y616 596 aa7.77□□□□□ -1.17
CKS1B-205ENST00000473344 FNDC1Q4ZHG4 1894 aaPredicted RBP7.77□□□□□ -1.17
CKS1B-205ENST00000473344 MYO7AQ13402 2215 aa7.76□□□□□ -1.17
CKS1B-205ENST00000473344 ZFHX2Q9C0A1 2572 aaPredicted RBP7.76□□□□□ -1.17
CKS1B-205ENST00000473344 MSH4O15457 936 aa7.76□□□□□ -1.17
CKS1B-205ENST00000473344 PRPF3O43395 683 aaKnown RBP7.76□□□□□ -1.17
CKS1B-205ENST00000473344 ALDH2P05091 517 aa7.76□□□□□ -1.17
CKS1B-205ENST00000473344 SSBP05455 408 aaKnown RBP eCLIP7.76□□□□□ -1.17
CKS1B-205ENST00000473344 GALTP07902 379 aa7.76□□□□□ -1.17
CKS1B-205ENST00000473344 AOC1P19801 751 aa7.76□□□□□ -1.17
CKS1B-205ENST00000473344 CLCN1P35523 988 aa7.76□□□□□ -1.17
CKS1B-205ENST00000473344 RAB27AP51159 221 aa7.76□□□□□ -1.17
CKS1B-205ENST00000473344 USP11P51784 963 aa7.76□□□□□ -1.17
CKS1B-205ENST00000473344 DRP2Q13474 957 aa7.76□□□□□ -1.17
CKS1B-205ENST00000473344 UGCGQ16739 394 aa7.76□□□□□ -1.17
CKS1B-205ENST00000473344 LETM2Q2VYF4 491 aa7.76□□□□□ -1.17
CKS1B-205ENST00000473344 ADCK5Q3MIX3 580 aa7.76□□□□□ -1.17
CKS1B-205ENST00000473344 XKR3Q5GH77 459 aa7.76□□□□□ -1.17
CKS1B-205ENST00000473344 Q6ZUG5 572 aa7.76□□□□□ -1.17
CKS1B-205ENST00000473344 MIER3Q7Z3K6 550 aa7.76□□□□□ -1.17
CKS1B-205ENST00000473344 GPR149Q86SP6 731 aa7.76□□□□□ -1.17
CKS1B-205ENST00000473344 ZNF410Q86VK4 478 aa7.76□□□□□ -1.17
CKS1B-205ENST00000473344 TMEM173Q86WV6 379 aaPredicted RBP7.76□□□□□ -1.17
CKS1B-205ENST00000473344 ADSSL1Q8N142 457 aa7.76□□□□□ -1.17
CKS1B-205ENST00000473344 SIX5Q8N196 739 aa7.76□□□□□ -1.17
CKS1B-205ENST00000473344 KCNG4Q8TDN1 519 aa7.76□□□□□ -1.17
CKS1B-205ENST00000473344 BRF1Q92994 677 aa7.76□□□□□ -1.17
CKS1B-205ENST00000473344 PHKBQ93100 1093 aa7.76□□□□□ -1.17
CKS1B-205ENST00000473344 LENG9Q96B70 501 aa7.76□□□□□ -1.17
CKS1B-205ENST00000473344 NLRP4Q96MN2 994 aa7.76□□□□□ -1.17
CKS1B-205ENST00000473344 RTP3Q9BQQ7 232 aa7.76□□□□□ -1.17
CKS1B-205ENST00000473344 JPH2Q9BR39 696 aaPredicted RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms