RNA–Protein interactions for RNA: ENST00000473282.6

CDK5RAP2-209, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 5,956 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-209ENST00000473282 UTP11Q9Y3A2 253 aaKnown RBP8.72□□□□□ -1.01
CDK5RAP2-209ENST00000473282 CCDC182A6NF36 153 aa8.72□□□□□ -1.01
CDK5RAP2-209ENST00000473282 GNPATO15228 680 aa8.72□□□□□ -1.01
CDK5RAP2-209ENST00000473282 ESRRAP11474 423 aaPredicted RBP8.72□□□□□ -1.01
CDK5RAP2-209ENST00000473282 VCLP18206 1134 aa8.72□□□□□ -1.01
CDK5RAP2-209ENST00000473282 LMOD1P29536 600 aaPredicted RBP8.72□□□□□ -1.01
CDK5RAP2-209ENST00000473282 SYT16Q17RD7 645 aa8.72□□□□□ -1.01
CDK5RAP2-209ENST00000473282 KCTD16Q68DU8 428 aa8.72□□□□□ -1.01
CDK5RAP2-209ENST00000473282 ULK3Q6PHR2 472 aa8.72□□□□□ -1.01
CDK5RAP2-209ENST00000473282 TAGAPQ8N103 731 aa8.72□□□□□ -1.01
CDK5RAP2-209ENST00000473282 TMEM87AQ8NBN3 555 aa8.72□□□□□ -1.01
CDK5RAP2-209ENST00000473282 RBM17Q96I25 401 aaKnown RBP8.72□□□□□ -1.01
CDK5RAP2-209ENST00000473282 TYW1Q9NV66 732 aaKnown RBP8.72□□□□□ -1.01
CDK5RAP2-209ENST00000473282 LIMA1Q9UHB6 759 aaKnown RBP8.72□□□□□ -1.01
CDK5RAP2-209ENST00000473282 RUVBL2Q9Y230 463 aaKnown RBP8.72□□□□□ -1.01
CDK5RAP2-209ENST00000473282 TOM1L1O75674 476 aa8.72□□□□□ -1.01
CDK5RAP2-209ENST00000473282 NFE2L1Q14494 772 aa8.72□□□□□ -1.01
CDK5RAP2-209ENST00000473282 SLC9C1Q4G0N8 1177 aa8.72□□□□□ -1.01
CDK5RAP2-209ENST00000473282 TCP11X2Q5H9J9 407 aa8.72□□□□□ -1.01
CDK5RAP2-209ENST00000473282 BORAQ6PGQ7 559 aa8.72□□□□□ -1.01
CDK5RAP2-209ENST00000473282 ERICH1Q86X53 443 aa8.72□□□□□ -1.01
CDK5RAP2-209ENST00000473282 SUGP1Q8IWZ8 645 aaKnown RBP8.72□□□□□ -1.01
CDK5RAP2-209ENST00000473282 SPAG16Q8N0X2 631 aa8.72□□□□□ -1.01
CDK5RAP2-209ENST00000473282 LPIN2Q92539 896 aa8.72□□□□□ -1.01
CDK5RAP2-209ENST00000473282 RGL2O15211 777 aa8.72□□□□□ -1.01
CDK5RAP2-209ENST00000473282 PRMT3O60678 531 aa8.72□□□□□ -1.01
CDK5RAP2-209ENST00000473282 ASIC1P78348 528 aa8.72□□□□□ -1.01
CDK5RAP2-209ENST00000473282 THOC5Q13769 683 aaKnown RBP8.72□□□□□ -1.01
CDK5RAP2-209ENST00000473282 CAPRIN1Q14444 709 aaKnown RBP8.72□□□□□ -1.01
CDK5RAP2-209ENST00000473282 INTS4Q96HW7 963 aaKnown RBP8.72□□□□□ -1.01
CDK5RAP2-209ENST00000473282 SLC35C2Q9NQQ7 365 aa8.72□□□□□ -1.01
CDK5RAP2-209ENST00000473282 SHROOM2Q13796 1616 aa8.72□□□□□ -1.01
CDK5RAP2-209ENST00000473282 SAMD9LQ8IVG5 1584 aa8.71□□□□□ -1.01
CDK5RAP2-209ENST00000473282 PPM1BO75688 479 aa8.71□□□□□ -1.01
CDK5RAP2-209ENST00000473282 SEC31AO94979 1220 aaKnown RBP8.71□□□□□ -1.01
CDK5RAP2-209ENST00000473282 GSNP06396 782 aa8.71□□□□□ -1.01
CDK5RAP2-209ENST00000473282 SMCO1Q147U7 214 aa8.71□□□□□ -1.01
CDK5RAP2-209ENST00000473282 HAUS3Q68CZ6 603 aa8.71□□□□□ -1.01
CDK5RAP2-209ENST00000473282 DHX32Q7L7V1 743 aaKnown RBP8.71□□□□□ -1.01
CDK5RAP2-209ENST00000473282 TDRD1Q9BXT4 1180 aaKnown RBP8.71□□□□□ -1.01
CDK5RAP2-209ENST00000473282 HPS4Q9NQG7 708 aa8.71□□□□□ -1.01
CDK5RAP2-209ENST00000473282 TARBP1Q13395 1621 aaKnown RBP8.71□□□□□ -1.01
CDK5RAP2-209ENST00000473282 RAB19A4D1S5 217 aa8.71□□□□□ -1.01
CDK5RAP2-209ENST00000473282 PPIP5K2O43314 1243 aa8.71□□□□□ -1.01
CDK5RAP2-209ENST00000473282 ARL3P36405 182 aa8.71□□□□□ -1.01
CDK5RAP2-209ENST00000473282 SLCO1A2P46721 670 aa8.71□□□□□ -1.01
CDK5RAP2-209ENST00000473282 EMC2Q15006 297 aa8.71□□□□□ -1.01
CDK5RAP2-209ENST00000473282 TMTC3Q6ZXV5 915 aa8.71□□□□□ -1.01
CDK5RAP2-209ENST00000473282 CHID1Q9BWS9 393 aa8.71□□□□□ -1.01
CDK5RAP2-209ENST00000473282 FBRSL1Q9HCM7 1045 aaKnown RBP8.71□□□□□ -1.01
CDK5RAP2-209ENST00000473282 GUCA1BQ9UMX6 200 aa8.71□□□□□ -1.01
CDK5RAP2-209ENST00000473282 VPS4AQ9UN37 437 aa8.71□□□□□ -1.01
CDK5RAP2-209ENST00000473282 C14orf166Q9Y224 244 aaKnown RBP8.71□□□□□ -1.01
CDK5RAP2-209ENST00000473282 ZBED1O96006 694 aa8.71□□□□□ -1.02
CDK5RAP2-209ENST00000473282 CHRM1P11229 460 aaPredicted RBP8.71□□□□□ -1.02
CDK5RAP2-209ENST00000473282 PRKACBP22694 351 aa8.71□□□□□ -1.02
CDK5RAP2-209ENST00000473282 GMFBP60983 142 aa8.71□□□□□ -1.02
CDK5RAP2-209ENST00000473282 SCRN1Q12765 414 aa8.71□□□□□ -1.02
CDK5RAP2-209ENST00000473282 ARMCX5Q6P1M9 558 aa8.71□□□□□ -1.02
CDK5RAP2-209ENST00000473282 DUS1LQ6P1R4 473 aaKnown RBP8.71□□□□□ -1.02
CDK5RAP2-209ENST00000473282 GSTA5Q7RTV2 222 aa8.71□□□□□ -1.02
CDK5RAP2-209ENST00000473282 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.71□□□□□ -1.02
CDK5RAP2-209ENST00000473282 NLRP14Q86W24 1093 aa8.71□□□□□ -1.02
CDK5RAP2-209ENST00000473282 RBM12BQ8IXT5 1001 aaKnown RBP8.71□□□□□ -1.02
CDK5RAP2-209ENST00000473282 GTPBP3Q969Y2 492 aaKnown RBP8.71□□□□□ -1.02
CDK5RAP2-209ENST00000473282 SERPINI1Q99574 410 aa8.71□□□□□ -1.02
CDK5RAP2-209ENST00000473282 NEUROD4Q9HD90 331 aa8.71□□□□□ -1.02
CDK5RAP2-209ENST00000473282 KDM2BQ8NHM5 1336 aa8.71□□□□□ -1.02
CDK5RAP2-209ENST00000473282 ZCCHC11Q5TAX3 1644 aaKnown RBP8.71□□□□□ -1.02
CDK5RAP2-209ENST00000473282 KLHL33A6NCF5 533 aa8.71□□□□□ -1.02
CDK5RAP2-209ENST00000473282 H3BM21 787 aa8.71□□□□□ -1.02
CDK5RAP2-209ENST00000473282 ENC1O14682 589 aa8.71□□□□□ -1.02
CDK5RAP2-209ENST00000473282 AREL1O15033 823 aa8.71□□□□□ -1.02
CDK5RAP2-209ENST00000473282 IFNA14P01570 189 aa8.71□□□□□ -1.02
CDK5RAP2-209ENST00000473282 RPN1P04843 607 aaKnown RBP8.71□□□□□ -1.02
CDK5RAP2-209ENST00000473282 FAM228BP0C875 321 aa8.71□□□□□ -1.02
CDK5RAP2-209ENST00000473282 CYP2C19P33261 490 aa8.71□□□□□ -1.02
CDK5RAP2-209ENST00000473282 CENPAP49450 140 aa8.71□□□□□ -1.02
CDK5RAP2-209ENST00000473282 SMU1Q2TAY7 513 aa8.71□□□□□ -1.02
CDK5RAP2-209ENST00000473282 ZNF224Q9NZL3 707 aa8.71□□□□□ -1.02
CDK5RAP2-209ENST00000473282 ZC3H7BQ9UGR2 993 aaKnown RBP8.71□□□□□ -1.02
CDK5RAP2-209ENST00000473282 O00370 1275 aa8.71□□□□□ -1.02
CDK5RAP2-209ENST00000473282 BUB1O43683 1085 aa8.71□□□□□ -1.02
CDK5RAP2-209ENST00000473282 SKAP2O75563 359 aaPredicted RBP8.71□□□□□ -1.02
CDK5RAP2-209ENST00000473282 MCM7P33993 719 aa8.71□□□□□ -1.02
CDK5RAP2-209ENST00000473282 CSTF3Q12996 717 aaKnown RBP8.71□□□□□ -1.02
CDK5RAP2-209ENST00000473282 KPNB1Q14974 876 aaKnown RBP8.71□□□□□ -1.02
CDK5RAP2-209ENST00000473282 RGS21Q2M5E4 152 aa8.71□□□□□ -1.02
CDK5RAP2-209ENST00000473282 SGSM1Q2NKQ1 1148 aa8.71□□□□□ -1.02
CDK5RAP2-209ENST00000473282 C10orf76Q5T2E6 689 aa8.71□□□□□ -1.02
CDK5RAP2-209ENST00000473282 RNF19BQ6ZMZ0 732 aa8.71□□□□□ -1.02
CDK5RAP2-209ENST00000473282 ANKRD23Q86SG2 305 aa8.71□□□□□ -1.02
CDK5RAP2-209ENST00000473282 ABCG4Q9H172 646 aa8.71□□□□□ -1.02
CDK5RAP2-209ENST00000473282 ABCB10Q9NRK6 738 aa8.71□□□□□ -1.02
CDK5RAP2-209ENST00000473282 COQ3Q9NZJ6 369 aa8.71□□□□□ -1.02
CDK5RAP2-209ENST00000473282 TMEM63CQ9P1W3 806 aa8.71□□□□□ -1.02
CDK5RAP2-209ENST00000473282 FOXN3O00409 490 aaPredicted RBP8.7□□□□□ -1.02
CDK5RAP2-209ENST00000473282 GNGT2O14610 69 aa8.7□□□□□ -1.02
CDK5RAP2-209ENST00000473282 ADRM1Q16186 407 aa8.7□□□□□ -1.02
CDK5RAP2-209ENST00000473282 SWI5Q1ZZU3 235 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms