RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 RRP9O43818 475 aaKnown RBP7.15□□□□□ -1.26
HDAC1-205ENST00000472928 SORBS3O60504 671 aa7.15□□□□□ -1.26
HDAC1-205ENST00000472928 CAND2O75155 1236 aa7.15□□□□□ -1.26
HDAC1-205ENST00000472928 PPP6R2O75170 966 aa7.15□□□□□ -1.26
HDAC1-205ENST00000472928 LIG1P18858 919 aa7.15□□□□□ -1.26
HDAC1-205ENST00000472928 ICAM3P32942 547 aa7.15□□□□□ -1.26
HDAC1-205ENST00000472928 MCM7P33993 719 aa7.15□□□□□ -1.26
HDAC1-205ENST00000472928 NBL1P41271 181 aa7.15□□□□□ -1.26
HDAC1-205ENST00000472928 NDUFV1P49821 464 aa7.15□□□□□ -1.26
HDAC1-205ENST00000472928 SEC13P55735 322 aa7.15□□□□□ -1.26
HDAC1-205ENST00000472928 RAB15P59190 212 aa7.15□□□□□ -1.26
HDAC1-205ENST00000472928 AP3B2Q13367 1082 aa7.15□□□□□ -1.26
HDAC1-205ENST00000472928 STXBP2Q15833 593 aa7.15□□□□□ -1.26
HDAC1-205ENST00000472928 LETM2Q2VYF4 491 aa7.15□□□□□ -1.26
HDAC1-205ENST00000472928 HSDL1Q3SXM5 330 aa7.15□□□□□ -1.26
HDAC1-205ENST00000472928 CCDC183Q5T5S1 534 aa7.15□□□□□ -1.26
HDAC1-205ENST00000472928 USP17L6PQ6QN14 398 aa7.15□□□□□ -1.26
HDAC1-205ENST00000472928 SND1Q7KZF4 910 aaKnown RBP eCLIP7.15□□□□□ -1.26
HDAC1-205ENST00000472928 VASH1Q7L8A9 365 aaPredicted RBP7.15□□□□□ -1.26
HDAC1-205ENST00000472928 NEK8Q86SG6 692 aa7.15□□□□□ -1.26
HDAC1-205ENST00000472928 SPNS2Q8IVW8 549 aa7.15□□□□□ -1.26
HDAC1-205ENST00000472928 DHX37Q8IY37 1157 aaKnown RBP7.15□□□□□ -1.26
HDAC1-205ENST00000472928 EFHBQ8N7U6 833 aa7.15□□□□□ -1.26
HDAC1-205ENST00000472928 NSUN6Q8TEA1 469 aaKnown RBP7.15□□□□□ -1.26
HDAC1-205ENST00000472928 TBCKQ8TEA7 893 aa7.15□□□□□ -1.26
HDAC1-205ENST00000472928 SUSD6Q92537 303 aa7.15□□□□□ -1.26
HDAC1-205ENST00000472928 ATP6V0A1Q93050 837 aa7.15□□□□□ -1.26
HDAC1-205ENST00000472928 PHF7Q9BWX1 381 aaPredicted RBP7.15□□□□□ -1.26
HDAC1-205ENST00000472928 ANO3Q9BYT9 981 aa7.15□□□□□ -1.26
HDAC1-205ENST00000472928 IRF2BPLQ9H1B7 796 aa7.15□□□□□ -1.26
HDAC1-205ENST00000472928 GOLPH3LQ9H4A5 285 aa7.15□□□□□ -1.26
HDAC1-205ENST00000472928 TMEM63CQ9P1W3 806 aa7.15□□□□□ -1.26
HDAC1-205ENST00000472928 BARX2Q9UMQ3 279 aaPredicted RBP7.15□□□□□ -1.26
HDAC1-205ENST00000472928 PCDHA7Q9UN72 937 aa7.15□□□□□ -1.26
HDAC1-205ENST00000472928 PLAGL2Q9UPG8 496 aa7.15□□□□□ -1.26
HDAC1-205ENST00000472928 MRPL11Q9Y3B7 192 aaKnown RBP7.15□□□□□ -1.26
HDAC1-205ENST00000472928 RWDD3Q9Y3V2 267 aa7.15□□□□□ -1.26
HDAC1-205ENST00000472928 PCDHGC5Q9Y5F6 944 aa7.15□□□□□ -1.26
HDAC1-205ENST00000472928 MRVI1Q9Y6F6 885 aa7.15□□□□□ -1.26
HDAC1-205ENST00000472928 ARID2Q68CP9 1835 aa7.15□□□□□ -1.27
HDAC1-205ENST00000472928 USP24Q9UPU5 2620 aa7.14□□□□□ -1.27
HDAC1-205ENST00000472928 A0A1W2PQ27 194 aa7.14□□□□□ -1.27
HDAC1-205ENST00000472928 A0A1W2PQ64 194 aa7.14□□□□□ -1.27
HDAC1-205ENST00000472928 A0A1W2PQD8 194 aa7.14□□□□□ -1.27
HDAC1-205ENST00000472928 SPDYE3A6NKU9 549 aa7.14□□□□□ -1.27
HDAC1-205ENST00000472928 ERVH48-1M5A8F1 160 aa7.14□□□□□ -1.27
HDAC1-205ENST00000472928 NEMFO60524 1076 aa7.14□□□□□ -1.27
HDAC1-205ENST00000472928 CUTAO60888 179 aa7.14□□□□□ -1.27
HDAC1-205ENST00000472928 PPFIA4O75335 1185 aa7.14□□□□□ -1.27
HDAC1-205ENST00000472928 EIF3JO75822 258 aaKnown RBP7.14□□□□□ -1.27
HDAC1-205ENST00000472928 CFBP00751 764 aa7.14□□□□□ -1.27
HDAC1-205ENST00000472928 ITGB1P05556 798 aa7.14□□□□□ -1.27
HDAC1-205ENST00000472928 SMIM10L2AP0DMW4 78 aa7.14□□□□□ -1.27
HDAC1-205ENST00000472928 SMIM10L2BP0DMW5 78 aa7.14□□□□□ -1.27
HDAC1-205ENST00000472928 EIF2AK2P19525 551 aaKnown RBP7.14□□□□□ -1.27
HDAC1-205ENST00000472928 HOXA13P31271 388 aaPredicted RBP7.14□□□□□ -1.27
HDAC1-205ENST00000472928 SCTRP47872 440 aa7.14□□□□□ -1.27
HDAC1-205ENST00000472928 ATP2C1P98194 919 aaPredicted RBP7.14□□□□□ -1.27
HDAC1-205ENST00000472928 SP2Q02086 613 aa7.14□□□□□ -1.27
HDAC1-205ENST00000472928 PTPN21Q16825 1174 aa7.14□□□□□ -1.27
HDAC1-205ENST00000472928 FAM26DQ5JW98 314 aa7.14□□□□□ -1.27
HDAC1-205ENST00000472928 CELF3Q5SZQ8 465 aaKnown RBP7.14□□□□□ -1.27
HDAC1-205ENST00000472928 AXDND1Q5T1B0 1012 aaPredicted RBP7.14□□□□□ -1.27
HDAC1-205ENST00000472928 CFAP47Q6ZTR5 3102 aa7.14□□□□□ -1.27
HDAC1-205ENST00000472928 EHBP1Q8NDI1 1231 aa7.14□□□□□ -1.27
HDAC1-205ENST00000472928 VN1R2Q8NFZ6 395 aa7.14□□□□□ -1.27
HDAC1-205ENST00000472928 SPPL3Q8TCT6 385 aa7.14□□□□□ -1.27
HDAC1-205ENST00000472928 APBB2Q92870 758 aa7.14□□□□□ -1.27
HDAC1-205ENST00000472928 ZNF689Q96CS4 500 aaPredicted RBP7.14□□□□□ -1.27
HDAC1-205ENST00000472928 RPGRIP1Q96KN7 1286 aa7.14□□□□□ -1.27
HDAC1-205ENST00000472928 SPATA33Q96N06 139 aa7.14□□□□□ -1.27
HDAC1-205ENST00000472928 CLIC6Q96NY7 704 aa7.14□□□□□ -1.27
HDAC1-205ENST00000472928 CDK15Q96Q40 435 aa7.14□□□□□ -1.27
HDAC1-205ENST00000472928 IWS1Q96ST2 819 aa7.14□□□□□ -1.27
HDAC1-205ENST00000472928 RMDN3Q96TC7 470 aa7.14□□□□□ -1.27
HDAC1-205ENST00000472928 PLVAPQ9BX97 442 aa7.14□□□□□ -1.27
HDAC1-205ENST00000472928 MAF1Q9H063 256 aa7.14□□□□□ -1.27
HDAC1-205ENST00000472928 DDX19AQ9NUU7 478 aaKnown RBP7.14□□□□□ -1.27
HDAC1-205ENST00000472928 DACT1Q9NYF0 836 aa7.14□□□□□ -1.27
HDAC1-205ENST00000472928 BAHCC1Q9P281 2608 aa7.14□□□□□ -1.27
HDAC1-205ENST00000472928 FBXO2Q9UK22 296 aaPredicted RBP7.14□□□□□ -1.27
HDAC1-205ENST00000472928 MORC2Q9Y6X9 1032 aaPredicted RBP7.14□□□□□ -1.27
HDAC1-205ENST00000472928 SFI1A8K8P3 1242 aa7.13□□□□□ -1.27
HDAC1-205ENST00000472928 GCOM1H8Y6P7 765 aaPredicted RBP7.13□□□□□ -1.27
HDAC1-205ENST00000472928 MEIS2O14770 477 aa7.13□□□□□ -1.27
HDAC1-205ENST00000472928 SLC37A4O43826 429 aa7.13□□□□□ -1.27
HDAC1-205ENST00000472928 CCNT1O60563 726 aaKnown RBP7.13□□□□□ -1.27
HDAC1-205ENST00000472928 KINO60870 393 aaKnown RBP7.13□□□□□ -1.27
HDAC1-205ENST00000472928 TDP2O95551 362 aa7.13□□□□□ -1.27
HDAC1-205ENST00000472928 GGPS1O95749 300 aa7.13□□□□□ -1.27
HDAC1-205ENST00000472928 FOSP01100 380 aaPredicted RBP7.13□□□□□ -1.27
HDAC1-205ENST00000472928 CHRNA1P02708 482 aa7.13□□□□□ -1.27
HDAC1-205ENST00000472928 NR3C2P08235 984 aa7.13□□□□□ -1.27
HDAC1-205ENST00000472928 OR52Z1P0C646 297 aa7.13□□□□□ -1.27
HDAC1-205ENST00000472928 POLR2MP0CAP2 368 aa7.13□□□□□ -1.27
HDAC1-205ENST00000472928 PFKFB1P16118 471 aa7.13□□□□□ -1.27
HDAC1-205ENST00000472928 ATF7P17544 494 aaPredicted RBP7.13□□□□□ -1.27
HDAC1-205ENST00000472928 UBA1P22314 1058 aaKnown RBP7.13□□□□□ -1.27
HDAC1-205ENST00000472928 ID4P47928 161 aa7.13□□□□□ -1.27
HDAC1-205ENST00000472928 NRIP1P48552 1158 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms