RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 TUBGCP2Q9BSJ2 902 aa10.93□□□□□ -0.66
APTX-216ENST00000472896 EDEM3Q9BZQ6 932 aa10.93□□□□□ -0.66
APTX-216ENST00000472896 CCDC134Q9H6E4 229 aa10.93□□□□□ -0.66
APTX-216ENST00000472896 PIH1D3Q9NQM4 214 aaKnown RBP10.93□□□□□ -0.66
APTX-216ENST00000472896 SAMD15Q9P1V8 674 aa10.93□□□□□ -0.66
APTX-216ENST00000472896 CTNNAL1Q9UBT7 734 aa10.93□□□□□ -0.66
APTX-216ENST00000472896 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.93□□□□□ -0.66
APTX-216ENST00000472896 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.93□□□□□ -0.66
APTX-216ENST00000472896 SSU72P8A0A1W2PR75 194 aa10.93□□□□□ -0.66
APTX-216ENST00000472896 LRRD1A4D1F6 860 aa10.93□□□□□ -0.66
APTX-216ENST00000472896 PDLIM1O00151 329 aa10.93□□□□□ -0.66
APTX-216ENST00000472896 DIAPH2O60879 1101 aa10.93□□□□□ -0.66
APTX-216ENST00000472896 ATP2C2O75185 946 aa10.93□□□□□ -0.66
APTX-216ENST00000472896 HLA-DOAP06340 250 aa10.93□□□□□ -0.66
APTX-216ENST00000472896 RXRAP19793 462 aa10.93□□□□□ -0.66
APTX-216ENST00000472896 ATP4AP20648 1035 aa10.93□□□□□ -0.66
APTX-216ENST00000472896 TMOD1P28289 359 aa10.93□□□□□ -0.66
APTX-216ENST00000472896 MRPS35P82673 323 aaKnown RBP10.93□□□□□ -0.66
APTX-216ENST00000472896 ATP2C1P98194 919 aaPredicted RBP10.93□□□□□ -0.66
APTX-216ENST00000472896 TMED8Q6PL24 325 aaPredicted RBP10.93□□□□□ -0.66
APTX-216ENST00000472896 NUP133Q8WUM0 1156 aa10.93□□□□□ -0.66
APTX-216ENST00000472896 TLCD1Q96CP7 247 aa10.93□□□□□ -0.66
APTX-216ENST00000472896 PCMTD1Q96MG8 357 aaPredicted RBP10.93□□□□□ -0.66
APTX-216ENST00000472896 PLCD4Q9BRC7 762 aa10.93□□□□□ -0.66
APTX-216ENST00000472896 RNF26Q9BY78 433 aaPredicted RBP10.93□□□□□ -0.66
APTX-216ENST00000472896 PAPOLBQ9NRJ5 636 aaKnown RBP10.93□□□□□ -0.66
APTX-216ENST00000472896 IRAK4Q9NWZ3 460 aa10.93□□□□□ -0.66
APTX-216ENST00000472896 NOVA2Q9UNW9 492 aaKnown RBP10.93□□□□□ -0.66
APTX-216ENST00000472896 PHF24Q9UPV7 400 aa10.93□□□□□ -0.66
APTX-216ENST00000472896 GRXCR1A8MXD5 290 aa10.92□□□□□ -0.66
APTX-216ENST00000472896 B4DLN1 442 aa10.92□□□□□ -0.66
APTX-216ENST00000472896 B4E1Z4 1266 aa10.92□□□□□ -0.66
APTX-216ENST00000472896 STRNO43815 780 aa10.92□□□□□ -0.66
APTX-216ENST00000472896 CLTBP09497 229 aa10.92□□□□□ -0.66
APTX-216ENST00000472896 PBX2P40425 430 aa10.92□□□□□ -0.66
APTX-216ENST00000472896 NR5A1Q13285 461 aa10.92□□□□□ -0.66
APTX-216ENST00000472896 ABCB5Q2M3G0 1257 aa10.92□□□□□ -0.66
APTX-216ENST00000472896 SGSM1Q2NKQ1 1148 aa10.92□□□□□ -0.66
APTX-216ENST00000472896 CERKLQ49MI3 558 aaPredicted RBP10.92□□□□□ -0.66
APTX-216ENST00000472896 KIAA1755Q5JYT7 1200 aa10.92□□□□□ -0.66
APTX-216ENST00000472896 TRPM8Q7Z2W7 1104 aa10.92□□□□□ -0.66
APTX-216ENST00000472896 HOOK3Q86VS8 718 aa10.92□□□□□ -0.66
APTX-216ENST00000472896 LMNTD2Q8IXW0 634 aa10.92□□□□□ -0.66
APTX-216ENST00000472896 GALNT15Q8N3T1 639 aa10.92□□□□□ -0.66
APTX-216ENST00000472896 KLHL23Q8NBE8 558 aa10.92□□□□□ -0.66
APTX-216ENST00000472896 ASB2Q96Q27 587 aa10.92□□□□□ -0.66
APTX-216ENST00000472896 KRT12Q99456 494 aa10.92□□□□□ -0.66
APTX-216ENST00000472896 KRT23Q9C075 422 aa10.92□□□□□ -0.66
APTX-216ENST00000472896 YIPF3Q9GZM5 350 aa10.92□□□□□ -0.66
APTX-216ENST00000472896 SPATC1LQ9H0A9 340 aa10.92□□□□□ -0.66
APTX-216ENST00000472896 PUS7LQ9H0K6 701 aaKnown RBP10.92□□□□□ -0.66
APTX-216ENST00000472896 BLZF1Q9H2G9 400 aa10.92□□□□□ -0.66
APTX-216ENST00000472896 RGL1Q9NZL6 768 aa10.92□□□□□ -0.66
APTX-216ENST00000472896 CNOT8Q9UFF9 292 aaKnown RBP10.92□□□□□ -0.66
APTX-216ENST00000472896 TMEM59LQ9UK28 342 aa10.92□□□□□ -0.66
APTX-216ENST00000472896 FOCADQ5VW36 1801 aa10.91□□□□□ -0.66
APTX-216ENST00000472896 A0A1W2PRG0 241 aa10.91□□□□□ -0.66
APTX-216ENST00000472896 AKR1B10O60218 316 aa10.91□□□□□ -0.66
APTX-216ENST00000472896 PGK1P00558 417 aa10.91□□□□□ -0.66
APTX-216ENST00000472896 RAG1P15918 1043 aa10.91□□□□□ -0.66
APTX-216ENST00000472896 ATP2A2P16615 1042 aaKnown RBP10.91□□□□□ -0.66
APTX-216ENST00000472896 TAL1P17542 331 aaPredicted RBP10.91□□□□□ -0.66
APTX-216ENST00000472896 CYP7A1P22680 504 aa10.91□□□□□ -0.66
APTX-216ENST00000472896 CXCR5P32302 372 aa10.91□□□□□ -0.66
APTX-216ENST00000472896 EIF4A3P38919 411 aaKnown RBP10.91□□□□□ -0.66
APTX-216ENST00000472896 PLA2G5P39877 138 aa10.91□□□□□ -0.66
APTX-216ENST00000472896 ZAP70P43403 619 aa10.91□□□□□ -0.66
APTX-216ENST00000472896 TRAPPC10P48553 1259 aa10.91□□□□□ -0.66
APTX-216ENST00000472896 MRPS25P82663 173 aaKnown RBP10.91□□□□□ -0.66
APTX-216ENST00000472896 PDIA5Q14554 519 aa10.91□□□□□ -0.66
APTX-216ENST00000472896 COG2Q14746 738 aa10.91□□□□□ -0.66
APTX-216ENST00000472896 UAP1Q16222 522 aaPredicted RBP10.91□□□□□ -0.66
APTX-216ENST00000472896 TTI2Q6NXR4 508 aa10.91□□□□□ -0.66
APTX-216ENST00000472896 C16orf59Q7L2K0 433 aa10.91□□□□□ -0.66
APTX-216ENST00000472896 APBB1IPQ7Z5R6 666 aaPredicted RBP10.91□□□□□ -0.66
APTX-216ENST00000472896 TBC1D1Q86TI0 1168 aaPredicted RBP10.91□□□□□ -0.66
APTX-216ENST00000472896 CFAP61Q8NHU2 1237 aa10.91□□□□□ -0.66
APTX-216ENST00000472896 TIFAQ96CG3 184 aa10.91□□□□□ -0.66
APTX-216ENST00000472896 BICD1Q96G01 975 aa10.91□□□□□ -0.66
APTX-216ENST00000472896 PBKQ96KB5 322 aa10.91□□□□□ -0.66
APTX-216ENST00000472896 ZNF317Q96PQ6 595 aaPredicted RBP10.91□□□□□ -0.66
APTX-216ENST00000472896 UBAC1Q9BSL1 405 aa10.91□□□□□ -0.66
APTX-216ENST00000472896 RAB17Q9H0T7 212 aa10.91□□□□□ -0.66
APTX-216ENST00000472896 PANK4Q9NVE7 773 aa10.91□□□□□ -0.66
APTX-216ENST00000472896 MYO9BQ13459 2157 aa10.91□□□□□ -0.66
APTX-216ENST00000472896 RBAK-RBAKDNI3L0D1 243 aa10.9□□□□□ -0.66
APTX-216ENST00000472896 RAD51CO43502 376 aa10.9□□□□□ -0.66
APTX-216ENST00000472896 PQBP1O60828 265 aaKnown RBP10.9□□□□□ -0.66
APTX-216ENST00000472896 SHMT1P34896 483 aa10.9□□□□□ -0.66
APTX-216ENST00000472896 LONP1P36776 959 aaKnown RBP10.9□□□□□ -0.66
APTX-216ENST00000472896 ATP11AP98196 1134 aa10.9□□□□□ -0.66
APTX-216ENST00000472896 EVX2Q03828 476 aa10.9□□□□□ -0.66
APTX-216ENST00000472896 FPGSQ05932 587 aa10.9□□□□□ -0.66
APTX-216ENST00000472896 FAAP100Q0VG06 881 aa10.9□□□□□ -0.66
APTX-216ENST00000472896 DYNC1I2Q13409 638 aaKnown RBP10.9□□□□□ -0.66
APTX-216ENST00000472896 ADGRE1Q14246 886 aa10.9□□□□□ -0.66
APTX-216ENST00000472896 HLTFQ14527 1009 aaKnown RBP eCLIP10.9□□□□□ -0.66
APTX-216ENST00000472896 TTC38Q5R3I4 469 aa10.9□□□□□ -0.66
APTX-216ENST00000472896 THEMIS2Q5TEJ8 643 aa10.9□□□□□ -0.66
APTX-216ENST00000472896 MIGA1Q8NAN2 632 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms