RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 HOXA11P31270 313 aaPredicted RBP21.53■■□□□ 1.04
COMMD1-208ENST00000472729 IRS1P35568 1242 aa21.53■■□□□ 1.04
COMMD1-208ENST00000472729 PBX3P40426 434 aa21.53■■□□□ 1.04
COMMD1-208ENST00000472729 IFNLR1Q8IU57 520 aaPredicted RBP21.53■■□□□ 1.04
COMMD1-208ENST00000472729 IGSF22Q8N9C0 903 aa21.53■■□□□ 1.04
COMMD1-208ENST00000472729 TCF25Q9BQ70 676 aa21.53■■□□□ 1.04
COMMD1-208ENST00000472729 GPRC5CQ9NQ84 441 aa21.53■■□□□ 1.04
COMMD1-208ENST00000472729 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.53■■□□□ 1.04
COMMD1-208ENST00000472729 LIG1P18858 919 aa21.52■■□□□ 1.04
COMMD1-208ENST00000472729 BCAR1P56945 870 aa21.52■■□□□ 1.04
COMMD1-208ENST00000472729 MBTD1Q05BQ5 628 aa21.52■■□□□ 1.04
COMMD1-208ENST00000472729 CAMK1Q14012 370 aa21.52■■□□□ 1.04
COMMD1-208ENST00000472729 KIFAP3Q92845 792 aa21.52■■□□□ 1.04
COMMD1-208ENST00000472729 CPB2Q96IY4 423 aa21.52■■□□□ 1.04
COMMD1-208ENST00000472729 NECAB3Q96P71 396 aaPredicted RBP21.52■■□□□ 1.04
COMMD1-208ENST00000472729 CDCA3Q99618 268 aaPredicted RBP21.52■■□□□ 1.04
COMMD1-208ENST00000472729 CSRNP2Q9H175 543 aa21.52■■□□□ 1.04
COMMD1-208ENST00000472729 PRMT7Q9NVM4 692 aaPredicted RBP21.52■■□□□ 1.04
COMMD1-208ENST00000472729 COL4A4P53420 1690 aaPredicted RBP21.52■■□□□ 1.04
COMMD1-208ENST00000472729 VPS37CA5D8V6 355 aaPredicted RBP21.51■■□□□ 1.03
COMMD1-208ENST00000472729 NR1I2O75469 434 aa21.51■■□□□ 1.03
COMMD1-208ENST00000472729 OFD1O75665 1012 aa21.51■■□□□ 1.03
COMMD1-208ENST00000472729 BMP15O95972 392 aa21.51■■□□□ 1.03
COMMD1-208ENST00000472729 NCLP19338 710 aaKnown RBP21.51■■□□□ 1.03
COMMD1-208ENST00000472729 PLPP4Q5VZY2 271 aa21.51■■□□□ 1.03
COMMD1-208ENST00000472729 BRAPQ7Z569 592 aa21.51■■□□□ 1.03
COMMD1-208ENST00000472729 MRPL10Q7Z7H8 261 aaKnown RBP21.51■■□□□ 1.03
COMMD1-208ENST00000472729 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.51■■□□□ 1.03
COMMD1-208ENST00000472729 TBC1D13Q9NVG8 400 aa21.51■■□□□ 1.03
COMMD1-208ENST00000472729 VCANP13611 3396 aa21.5■■□□□ 1.03
COMMD1-208ENST00000472729 VWA3AA6NCI4 1184 aa21.5■■□□□ 1.03
COMMD1-208ENST00000472729 ALDH2P05091 517 aa21.5■■□□□ 1.03
COMMD1-208ENST00000472729 SSTR3P32745 418 aaPredicted RBP21.5■■□□□ 1.03
COMMD1-208ENST00000472729 NAMPTP43490 491 aa21.5■■□□□ 1.03
COMMD1-208ENST00000472729 ERVFC1P60507 584 aa21.5■■□□□ 1.03
COMMD1-208ENST00000472729 ATP2C1P98194 919 aaPredicted RBP21.5■■□□□ 1.03
COMMD1-208ENST00000472729 CLUL1Q15846 466 aa21.5■■□□□ 1.03
COMMD1-208ENST00000472729 MAPK6Q16659 721 aa21.5■■□□□ 1.03
COMMD1-208ENST00000472729 SLC27A1Q6PCB7 646 aa21.5■■□□□ 1.03
COMMD1-208ENST00000472729 EFHBQ8N7U6 833 aa21.5■■□□□ 1.03
COMMD1-208ENST00000472729 RASSF8Q8NHQ8 419 aa21.5■■□□□ 1.03
COMMD1-208ENST00000472729 PRIMPOLQ96LW4 560 aa21.5■■□□□ 1.03
COMMD1-208ENST00000472729 APOL6Q9BWW8 343 aa21.5■■□□□ 1.03
COMMD1-208ENST00000472729 NT5C3AQ9H0P0 336 aa21.5■■□□□ 1.03
COMMD1-208ENST00000472729 STK39Q9UEW8 545 aa21.5■■□□□ 1.03
COMMD1-208ENST00000472729 IPPQ9Y573 584 aa21.5■■□□□ 1.03
COMMD1-208ENST00000472729 GRXCR2A6NFK2 248 aa21.49■■□□□ 1.03
COMMD1-208ENST00000472729 NT5C1B-RDH14C9J2C7 533 aa21.49■■□□□ 1.03
COMMD1-208ENST00000472729 PER2O15055 1255 aa21.49■■□□□ 1.03
COMMD1-208ENST00000472729 ARF4P18085 180 aaPredicted RBP21.49■■□□□ 1.03
COMMD1-208ENST00000472729 GTF2F1P35269 517 aaKnown RBP eCLIP21.49■■□□□ 1.03
COMMD1-208ENST00000472729 EFNA5P52803 228 aa21.49■■□□□ 1.03
COMMD1-208ENST00000472729 ADAM15Q13444 863 aa21.49■■□□□ 1.03
COMMD1-208ENST00000472729 PRPF4BQ13523 1007 aaKnown RBP21.49■■□□□ 1.03
COMMD1-208ENST00000472729 SMC1AQ14683 1233 aaKnown RBP21.49■■□□□ 1.03
COMMD1-208ENST00000472729 CTC1Q2NKJ3 1217 aa21.49■■□□□ 1.03
COMMD1-208ENST00000472729 UBXN11Q5T124 520 aa21.49■■□□□ 1.03
COMMD1-208ENST00000472729 ARL6IP4Q66PJ3 421 aaKnown RBP21.49■■□□□ 1.03
COMMD1-208ENST00000472729 AGMOQ6ZNB7 445 aa21.49■■□□□ 1.03
COMMD1-208ENST00000472729 APBB1IPQ7Z5R6 666 aaPredicted RBP21.49■■□□□ 1.03
COMMD1-208ENST00000472729 ADGRD2Q7Z7M1 963 aa21.49■■□□□ 1.03
COMMD1-208ENST00000472729 SLC39A11Q8N1S5 342 aa21.49■■□□□ 1.03
COMMD1-208ENST00000472729 ADPGKQ9BRR6 497 aa21.49■■□□□ 1.03
COMMD1-208ENST00000472729 CD207Q9UJ71 328 aa21.49■■□□□ 1.03
COMMD1-208ENST00000472729 TRANK1O15050 2925 aa21.49■■□□□ 1.03
COMMD1-208ENST00000472729 CUL9Q8IWT3 2517 aa21.48■■□□□ 1.03
COMMD1-208ENST00000472729 MEIS3P2A8K0S8 358 aa21.48■■□□□ 1.03
COMMD1-208ENST00000472729 PP2D1A8MPX8 630 aa21.48■■□□□ 1.03
COMMD1-208ENST00000472729 EYA4O95677 639 aa21.48■■□□□ 1.03
COMMD1-208ENST00000472729 POMCP01189 267 aa21.48■■□□□ 1.03
COMMD1-208ENST00000472729 SSBP05455 408 aaKnown RBP eCLIP21.48■■□□□ 1.03
COMMD1-208ENST00000472729 CDC25AP30304 524 aa21.48■■□□□ 1.03
COMMD1-208ENST00000472729 COL19A1Q14993 1142 aa21.48■■□□□ 1.03
COMMD1-208ENST00000472729 KCTD17Q8N5Z5 321 aa21.48■■□□□ 1.03
COMMD1-208ENST00000472729 EIF2AQ9BY44 585 aaKnown RBP21.48■■□□□ 1.03
COMMD1-208ENST00000472729 PARP2Q9UGN5 583 aa21.48■■□□□ 1.03
COMMD1-208ENST00000472729 FAN1Q9Y2M0 1017 aa21.48■■□□□ 1.03
COMMD1-208ENST00000472729 PCDHGC5Q9Y5F6 944 aa21.48■■□□□ 1.03
COMMD1-208ENST00000472729 A0A1B0GUA9 196 aa21.47■■□□□ 1.03
COMMD1-208ENST00000472729 CCDC169A6NNP5 214 aa21.47■■□□□ 1.03
COMMD1-208ENST00000472729 E9PMD0 336 aa21.47■■□□□ 1.03
COMMD1-208ENST00000472729 LINC01565O15544 149 aa21.47■■□□□ 1.03
COMMD1-208ENST00000472729 B4GALT5O43286 388 aa21.47■■□□□ 1.03
COMMD1-208ENST00000472729 NPTXRO95502 500 aa21.47■■□□□ 1.03
COMMD1-208ENST00000472729 IL9P15248 144 aa21.47■■□□□ 1.03
COMMD1-208ENST00000472729 CUL4AQ13619 759 aa21.47■■□□□ 1.03
COMMD1-208ENST00000472729 ECM1Q16610 540 aa21.47■■□□□ 1.03
COMMD1-208ENST00000472729 DRC1Q96MC2 740 aa21.47■■□□□ 1.03
COMMD1-208ENST00000472729 NRDE2Q9H7Z3 1164 aa21.47■■□□□ 1.03
COMMD1-208ENST00000472729 KCNG1Q9UIX4 513 aa21.47■■□□□ 1.03
COMMD1-208ENST00000472729 GIT1Q9Y2X7 761 aa21.47■■□□□ 1.03
COMMD1-208ENST00000472729 N4BP3O15049 544 aa21.46■■□□□ 1.03
COMMD1-208ENST00000472729 CXCL14O95715 111 aa21.46■■□□□ 1.03
COMMD1-208ENST00000472729 PRKCBP05771 671 aa21.46■■□□□ 1.03
COMMD1-208ENST00000472729 GALTP07902 379 aa21.46■■□□□ 1.03
COMMD1-208ENST00000472729 MLH1P40692 756 aa21.46■■□□□ 1.03
COMMD1-208ENST00000472729 UBA7P41226 1012 aa21.46■■□□□ 1.03
COMMD1-208ENST00000472729 DMP1Q13316 513 aaPredicted RBP21.46■■□□□ 1.03
COMMD1-208ENST00000472729 GIT2Q14161 759 aa21.46■■□□□ 1.03
COMMD1-208ENST00000472729 CDCA2Q69YH5 1023 aaPredicted RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms