RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 GPR149Q86SP6 731 aa10.52□□□□□ -0.73
VCL-204ENST00000472585 DDX53Q86TM3 631 aaKnown RBP10.52□□□□□ -0.73
VCL-204ENST00000472585 PPFIBP1Q86W92 1011 aa10.52□□□□□ -0.73
VCL-204ENST00000472585 KSR1Q8IVT5 923 aa10.52□□□□□ -0.73
VCL-204ENST00000472585 C1orf210Q8IVY1 113 aa10.52□□□□□ -0.73
VCL-204ENST00000472585 ZNF713Q8N859 430 aaPredicted RBP10.52□□□□□ -0.73
VCL-204ENST00000472585 RSAD2Q8WXG1 361 aa10.52□□□□□ -0.73
VCL-204ENST00000472585 KLHL5Q96PQ7 755 aa10.52□□□□□ -0.73
VCL-204ENST00000472585 TRAIPQ9BWF2 469 aa10.52□□□□□ -0.73
VCL-204ENST00000472585 UNC45AQ9H3U1 944 aa10.52□□□□□ -0.73
VCL-204ENST00000472585 SFXN1Q9H9B4 322 aa10.52□□□□□ -0.73
VCL-204ENST00000472585 TBC1D17Q9HA65 648 aa10.52□□□□□ -0.73
VCL-204ENST00000472585 ANO2Q9NQ90 1003 aa10.52□□□□□ -0.73
VCL-204ENST00000472585 CDV3Q9UKY7 258 aaKnown RBP10.52□□□□□ -0.73
VCL-204ENST00000472585 CA14Q9ULX7 337 aa10.52□□□□□ -0.73
VCL-204ENST00000472585 SIT1Q9Y3P8 196 aa10.52□□□□□ -0.73
VCL-204ENST00000472585 MYH9P35579 1960 aaKnown RBP10.52□□□□□ -0.73
VCL-204ENST00000472585 ATRXP46100 2492 aa10.51□□□□□ -0.73
VCL-204ENST00000472585 MIA3Q5JRA6 1907 aa10.51□□□□□ -0.73
VCL-204ENST00000472585 CFAP47Q6ZTR5 3102 aa10.51□□□□□ -0.73
VCL-204ENST00000472585 A0A087WZ62 844 aa10.51□□□□□ -0.73
VCL-204ENST00000472585 ESYT2A0FGR8 921 aa10.51□□□□□ -0.73
VCL-204ENST00000472585 KRBA1A5PL33 1030 aa10.51□□□□□ -0.73
VCL-204ENST00000472585 DCNP07585 359 aaKnown RBP10.51□□□□□ -0.73
VCL-204ENST00000472585 CNPP09543 421 aaKnown RBP10.51□□□□□ -0.73
VCL-204ENST00000472585 GBP2P32456 591 aaPredicted RBP10.51□□□□□ -0.73
VCL-204ENST00000472585 ATXN1P54253 815 aaKnown RBP10.51□□□□□ -0.73
VCL-204ENST00000472585 NTRK3Q16288 839 aa10.51□□□□□ -0.73
VCL-204ENST00000472585 TSGA10IPQ3SY00 556 aa10.51□□□□□ -0.73
VCL-204ENST00000472585 VARS2Q5ST30 1063 aaKnown RBP10.51□□□□□ -0.73
VCL-204ENST00000472585 SYNE3Q6ZMZ3 975 aa10.51□□□□□ -0.73
VCL-204ENST00000472585 AGMOQ6ZNB7 445 aa10.51□□□□□ -0.73
VCL-204ENST00000472585 SLC5A5Q92911 643 aa10.51□□□□□ -0.73
VCL-204ENST00000472585 BORCS6Q96GS4 357 aa10.51□□□□□ -0.73
VCL-204ENST00000472585 MAP7D2Q96T17 732 aa10.51□□□□□ -0.73
VCL-204ENST00000472585 FDXACB1Q9BRP7 624 aaPredicted RBP10.51□□□□□ -0.73
VCL-204ENST00000472585 MRPL9Q9BYD2 267 aaKnown RBP10.51□□□□□ -0.73
VCL-204ENST00000472585 NIFKQ9BYG3 293 aaKnown RBP10.51□□□□□ -0.73
VCL-204ENST00000472585 NRBP2Q9NSY0 501 aa10.51□□□□□ -0.73
VCL-204ENST00000472585 CEP131Q9UPN4 1083 aa10.51□□□□□ -0.73
VCL-204ENST00000472585 SAMM50Q9Y512 469 aa10.51□□□□□ -0.73
VCL-204ENST00000472585 GPR179Q6PRD1 2367 aa10.51□□□□□ -0.73
VCL-204ENST00000472585 USP24Q9UPU5 2620 aa10.51□□□□□ -0.73
VCL-204ENST00000472585 CARNS1A5YM72 827 aa10.5□□□□□ -0.73
VCL-204ENST00000472585 PRR5-ARHGAP8B1AHC4 643 aa10.5□□□□□ -0.73
VCL-204ENST00000472585 WDR64B1ANS9 1081 aa10.5□□□□□ -0.73
VCL-204ENST00000472585 PRPF3O43395 683 aaKnown RBP10.5□□□□□ -0.73
VCL-204ENST00000472585 CHMP2AO43633 222 aa10.5□□□□□ -0.73
VCL-204ENST00000472585 ZNF623O75123 536 aa10.5□□□□□ -0.73
VCL-204ENST00000472585 PSMD10O75832 226 aa10.5□□□□□ -0.73
VCL-204ENST00000472585 EFEMP2O95967 443 aa10.5□□□□□ -0.73
VCL-204ENST00000472585 MYBP10242 640 aa10.5□□□□□ -0.73
VCL-204ENST00000472585 TMOD1P28289 359 aa10.5□□□□□ -0.73
VCL-204ENST00000472585 HOXA11P31270 313 aaPredicted RBP10.5□□□□□ -0.73
VCL-204ENST00000472585 CLCN4P51793 760 aa10.5□□□□□ -0.73
VCL-204ENST00000472585 POLGP54098 1239 aaPredicted RBP10.5□□□□□ -0.73
VCL-204ENST00000472585 ARHGAP8P85298 464 aa10.5□□□□□ -0.73
VCL-204ENST00000472585 LETM2Q2VYF4 491 aa10.5□□□□□ -0.73
VCL-204ENST00000472585 NOMO2Q5JPE7 1267 aa10.5□□□□□ -0.73
VCL-204ENST00000472585 REXO1Q8N1G1 1221 aaKnown RBP10.5□□□□□ -0.73
VCL-204ENST00000472585 SUMF1Q8NBK3 374 aa10.5□□□□□ -0.73
VCL-204ENST00000472585 NLRP7Q8WX94 980 aa10.5□□□□□ -0.73
VCL-204ENST00000472585 STAMQ92783 540 aa10.5□□□□□ -0.73
VCL-204ENST00000472585 PHKBQ93100 1093 aa10.5□□□□□ -0.73
VCL-204ENST00000472585 CCDC136Q96JN2 1154 aa10.5□□□□□ -0.73
VCL-204ENST00000472585 FAM167AQ96KS9 214 aa10.5□□□□□ -0.73
VCL-204ENST00000472585 GLT8D2Q9H1C3 349 aa10.5□□□□□ -0.73
VCL-204ENST00000472585 MINDY3Q9H8M7 445 aa10.5□□□□□ -0.73
VCL-204ENST00000472585 IFT122Q9HBG6 1241 aa10.5□□□□□ -0.73
VCL-204ENST00000472585 CHST12Q9NRB3 414 aa10.5□□□□□ -0.73
VCL-204ENST00000472585 F8W810 466 aa10.49□□□□□ -0.73
VCL-204ENST00000472585 SSBP05455 408 aaKnown RBP eCLIP10.49□□□□□ -0.73
VCL-204ENST00000472585 SRFP11831 508 aa10.49□□□□□ -0.73
VCL-204ENST00000472585 KLRC2P26717 231 aa10.49□□□□□ -0.73
VCL-204ENST00000472585 SETQ01105 290 aaPredicted RBP10.49□□□□□ -0.73
VCL-204ENST00000472585 LMNB2Q03252 620 aa10.49□□□□□ -0.73
VCL-204ENST00000472585 MTERF2Q49AM1 385 aa10.49□□□□□ -0.73
VCL-204ENST00000472585 UBXN11Q5T124 520 aa10.49□□□□□ -0.73
VCL-204ENST00000472585 PHLDB3Q6NSJ2 640 aa10.49□□□□□ -0.73
VCL-204ENST00000472585 ELMSAN1Q6PJG2 1045 aa10.49□□□□□ -0.73
VCL-204ENST00000472585 C15orf39Q6ZRI6 1047 aa10.49□□□□□ -0.73
VCL-204ENST00000472585 ST13P5Q8NFI4 369 aaPredicted RBP10.49□□□□□ -0.73
VCL-204ENST00000472585 NXPE3Q969Y0 559 aa10.49□□□□□ -0.73
VCL-204ENST00000472585 RIT2Q99578 217 aa10.49□□□□□ -0.73
VCL-204ENST00000472585 RTKNQ9BST9 563 aa10.49□□□□□ -0.73
VCL-204ENST00000472585 EMILIN2Q9BXX0 1053 aa10.49□□□□□ -0.73
VCL-204ENST00000472585 GCOM2Q9BZD3 368 aaPredicted RBP10.49□□□□□ -0.73
VCL-204ENST00000472585 GBP3Q9H0R5 595 aa10.49□□□□□ -0.73
VCL-204ENST00000472585 C6orf50Q9HD87 102 aa10.49□□□□□ -0.73
VCL-204ENST00000472585 FAM105AQ9NUU6 356 aa10.49□□□□□ -0.73
VCL-204ENST00000472585 DACT1Q9NYF0 836 aa10.49□□□□□ -0.73
VCL-204ENST00000472585 INPP5FQ9Y2H2 1132 aa10.49□□□□□ -0.73
VCL-204ENST00000472585 DCDC2BA2VCK2 349 aa10.48□□□□□ -0.73
VCL-204ENST00000472585 SPTLC1O15269 473 aa10.48□□□□□ -0.73
VCL-204ENST00000472585 LAMTOR5O43504 91 aa10.48□□□□□ -0.73
VCL-204ENST00000472585 MAFO75444 373 aaPredicted RBP10.48□□□□□ -0.73
VCL-204ENST00000472585 TWF2Q6IBS0 349 aaKnown RBP10.48□□□□□ -0.73
VCL-204ENST00000472585 Q6ZUG5 572 aa10.48□□□□□ -0.73
VCL-204ENST00000472585 ANO5Q75V66 913 aa10.48□□□□□ -0.73
VCL-204ENST00000472585 MRPL10Q7Z7H8 261 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms