RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 CSRNP2Q9H175 543 aa10.12□□□□□ -0.79
SYN3-211ENST00000472027 PRMT7Q9NVM4 692 aaPredicted RBP10.12□□□□□ -0.79
SYN3-211ENST00000472027 FBXO2Q9UK22 296 aaPredicted RBP10.12□□□□□ -0.79
SYN3-211ENST00000472027 SRPRBQ9Y5M8 271 aaKnown RBP10.12□□□□□ -0.79
SYN3-211ENST00000472027 CCDC169A6NNP5 214 aa10.11□□□□□ -0.79
SYN3-211ENST00000472027 SFI1A8K8P3 1242 aa10.11□□□□□ -0.79
SYN3-211ENST00000472027 FGF18O76093 207 aa10.11□□□□□ -0.79
SYN3-211ENST00000472027 ITGA4P13612 1032 aa10.11□□□□□ -0.79
SYN3-211ENST00000472027 LIG1P18858 919 aa10.11□□□□□ -0.79
SYN3-211ENST00000472027 GUCY2CP25092 1073 aa10.11□□□□□ -0.79
SYN3-211ENST00000472027 NPTX2P47972 431 aa10.11□□□□□ -0.79
SYN3-211ENST00000472027 PEX3P56589 373 aa10.11□□□□□ -0.79
SYN3-211ENST00000472027 RAD51AP2Q09MP3 1159 aa10.11□□□□□ -0.79
SYN3-211ENST00000472027 SLC39A14Q15043 492 aa10.11□□□□□ -0.79
SYN3-211ENST00000472027 KARSQ15046 597 aaKnown RBP10.11□□□□□ -0.79
SYN3-211ENST00000472027 MAPK6Q16659 721 aa10.11□□□□□ -0.79
SYN3-211ENST00000472027 CSPP1Q1MSJ5 1256 aa10.11□□□□□ -0.79
SYN3-211ENST00000472027 TCEAL5Q5H9L2 206 aa10.11□□□□□ -0.79
SYN3-211ENST00000472027 NOMO2Q5JPE7 1267 aa10.11□□□□□ -0.79
SYN3-211ENST00000472027 SLC27A1Q6PCB7 646 aa10.11□□□□□ -0.79
SYN3-211ENST00000472027 KCNT2Q6UVM3 1135 aa10.11□□□□□ -0.79
SYN3-211ENST00000472027 GLB1LQ6UWU2 654 aa10.11□□□□□ -0.79
SYN3-211ENST00000472027 USP49Q70CQ1 688 aa10.11□□□□□ -0.79
SYN3-211ENST00000472027 CDR2LQ86X02 465 aaPredicted RBP10.11□□□□□ -0.79
SYN3-211ENST00000472027 THNSL1Q8IYQ7 743 aa10.11□□□□□ -0.79
SYN3-211ENST00000472027 LRRC15Q8TF66 581 aa10.11□□□□□ -0.79
SYN3-211ENST00000472027 ATXN2LQ8WWM7 1075 aaKnown RBP10.11□□□□□ -0.79
SYN3-211ENST00000472027 RSPH1Q8WYR4 309 aa10.11□□□□□ -0.79
SYN3-211ENST00000472027 CCDC51Q96ER9 411 aa10.11□□□□□ -0.79
SYN3-211ENST00000472027 EPSTI1Q96J88 318 aa10.11□□□□□ -0.79
SYN3-211ENST00000472027 PRIMPOLQ96LW4 560 aa10.11□□□□□ -0.79
SYN3-211ENST00000472027 DRC1Q96MC2 740 aa10.11□□□□□ -0.79
SYN3-211ENST00000472027 CLIC6Q96NY7 704 aa10.11□□□□□ -0.79
SYN3-211ENST00000472027 KIFC3Q9BVG8 833 aa10.11□□□□□ -0.79
SYN3-211ENST00000472027 TIPINQ9BVW5 301 aa10.11□□□□□ -0.79
SYN3-211ENST00000472027 MRPL9Q9BYD2 267 aaKnown RBP10.11□□□□□ -0.79
SYN3-211ENST00000472027 TRIM6Q9C030 488 aaPredicted RBP10.11□□□□□ -0.79
SYN3-211ENST00000472027 CCDC113Q9H0I3 377 aa10.11□□□□□ -0.79
SYN3-211ENST00000472027 RNF39Q9H2S5 420 aa10.11□□□□□ -0.79
SYN3-211ENST00000472027 NSUN3Q9H649 340 aaKnown RBP10.11□□□□□ -0.79
SYN3-211ENST00000472027 RSAD1Q9HA92 442 aa10.11□□□□□ -0.79
SYN3-211ENST00000472027 UBN1Q9NPG3 1134 aa10.11□□□□□ -0.79
SYN3-211ENST00000472027 THEGQ9P2T0 379 aa10.11□□□□□ -0.79
SYN3-211ENST00000472027 TFIP11Q9UBB9 837 aaKnown RBP10.11□□□□□ -0.79
SYN3-211ENST00000472027 INPP5FQ9Y2H2 1132 aa10.11□□□□□ -0.79
SYN3-211ENST00000472027 HES2Q9Y543 173 aa10.11□□□□□ -0.79
SYN3-211ENST00000472027 IPPQ9Y573 584 aa10.11□□□□□ -0.79
SYN3-211ENST00000472027 COL6A3P12111 3177 aa10.11□□□□□ -0.79
SYN3-211ENST00000472027 NPHP3-ACAD11A0A0J9YXS1 232 aa10.1□□□□□ -0.79
SYN3-211ENST00000472027 TTLL13PA6NNM8 815 aa10.1□□□□□ -0.79
SYN3-211ENST00000472027 K7ERI5 159 aa10.1□□□□□ -0.79
SYN3-211ENST00000472027 ACKR2O00590 384 aa10.1□□□□□ -0.79
SYN3-211ENST00000472027 CSPG5O95196 566 aa10.1□□□□□ -0.79
SYN3-211ENST00000472027 NPTXRO95502 500 aa10.1□□□□□ -0.79
SYN3-211ENST00000472027 PRKCBP05771 671 aa10.1□□□□□ -0.79
SYN3-211ENST00000472027 ZSCAN22P10073 491 aaPredicted RBP10.1□□□□□ -0.79
SYN3-211ENST00000472027 DDIT3P35638 169 aa10.1□□□□□ -0.79
SYN3-211ENST00000472027 PBX3P40426 434 aa10.1□□□□□ -0.79
SYN3-211ENST00000472027 NASPP49321 788 aaPredicted RBP10.1□□□□□ -0.79
SYN3-211ENST00000472027 AFF1P51825 1210 aaKnown RBP10.1□□□□□ -0.79
SYN3-211ENST00000472027 EFNA5P52803 228 aa10.1□□□□□ -0.79
SYN3-211ENST00000472027 BCAR1P56945 870 aa10.1□□□□□ -0.79
SYN3-211ENST00000472027 PLCB3Q01970 1234 aa10.1□□□□□ -0.79
SYN3-211ENST00000472027 UBE3AQ05086 875 aa10.1□□□□□ -0.79
SYN3-211ENST00000472027 MAPK7Q13164 816 aa10.1□□□□□ -0.79
SYN3-211ENST00000472027 PRPF4BQ13523 1007 aaKnown RBP10.1□□□□□ -0.79
SYN3-211ENST00000472027 PKP1Q13835 747 aa10.1□□□□□ -0.79
SYN3-211ENST00000472027 DHX8Q14562 1220 aaKnown RBP10.1□□□□□ -0.79
SYN3-211ENST00000472027 MCM6Q14566 821 aa10.1□□□□□ -0.79
SYN3-211ENST00000472027 TIGD5Q53EQ6 642 aa10.1□□□□□ -0.79
SYN3-211ENST00000472027 ARSHQ5FYA8 562 aa10.1□□□□□ -0.79
SYN3-211ENST00000472027 LINC00301Q8NCQ3 95 aa10.1□□□□□ -0.79
SYN3-211ENST00000472027 RASSF8Q8NHQ8 419 aa10.1□□□□□ -0.79
SYN3-211ENST00000472027 URGCPQ8TCY9 931 aa10.1□□□□□ -0.79
SYN3-211ENST00000472027 HLA-CQ95604 372 aa10.1□□□□□ -0.79
SYN3-211ENST00000472027 ZNF396Q96N95 335 aaPredicted RBP10.1□□□□□ -0.79
SYN3-211ENST00000472027 ZNF558Q96NG5 402 aa10.1□□□□□ -0.79
SYN3-211ENST00000472027 NTPCRQ9BSD7 190 aaKnown RBP10.1□□□□□ -0.79
SYN3-211ENST00000472027 NRDE2Q9H7Z3 1164 aa10.1□□□□□ -0.79
SYN3-211ENST00000472027 C17orf75Q9HAS0 396 aa10.1□□□□□ -0.79
SYN3-211ENST00000472027 KMT5AQ9NQR1 393 aa10.1□□□□□ -0.79
SYN3-211ENST00000472027 BLOC1S4Q9NUP1 217 aa10.1□□□□□ -0.79
SYN3-211ENST00000472027 TBC1D13Q9NVG8 400 aa10.1□□□□□ -0.79
SYN3-211ENST00000472027 KCND2Q9NZV8 630 aa10.1□□□□□ -0.79
SYN3-211ENST00000472027 KANSL3Q9P2N6 904 aa10.1□□□□□ -0.79
SYN3-211ENST00000472027 KCNG1Q9UIX4 513 aa10.1□□□□□ -0.79
SYN3-211ENST00000472027 COG5Q9UP83 839 aa10.1□□□□□ -0.79
SYN3-211ENST00000472027 USP20Q9Y2K6 914 aa10.1□□□□□ -0.79
SYN3-211ENST00000472027 MORC2Q9Y6X9 1032 aaPredicted RBP10.1□□□□□ -0.79
SYN3-211ENST00000472027 CNTNAP2Q9UHC6 1331 aa10.09□□□□□ -0.79
SYN3-211ENST00000472027 CHD9Q3L8U1 2897 aa10.09□□□□□ -0.79
SYN3-211ENST00000472027 COL4A4P53420 1690 aaPredicted RBP10.09□□□□□ -0.79
SYN3-211ENST00000472027 RALGAPA2Q2PPJ7 1873 aa10.09□□□□□ -0.79
SYN3-211ENST00000472027 FNDC1Q4ZHG4 1894 aaPredicted RBP10.09□□□□□ -0.79
SYN3-211ENST00000472027 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.09□□□□□ -0.79
SYN3-211ENST00000472027 NT5C1B-RDH14C9J2C7 533 aa10.09□□□□□ -0.79
SYN3-211ENST00000472027 N4BP3O15049 544 aa10.09□□□□□ -0.79
SYN3-211ENST00000472027 DDHD2O94830 711 aa10.09□□□□□ -0.79
SYN3-211ENST00000472027 F13A1P00488 732 aa10.09□□□□□ -0.79
SYN3-211ENST00000472027 POMCP01189 267 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms