RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 AFF1P51825 1210 aaKnown RBP21.4■■□□□ 1.02
SORT1-203ENST00000471996 HTR4Q13639 388 aa21.4■■□□□ 1.02
SORT1-203ENST00000471996 UGCGQ16739 394 aa21.4■■□□□ 1.02
SORT1-203ENST00000471996 ZNF410Q86VK4 478 aa21.4■■□□□ 1.02
SORT1-203ENST00000471996 HDAC7Q8WUI4 952 aa21.4■■□□□ 1.02
SORT1-203ENST00000471996 SHDQ96IW2 340 aa21.4■■□□□ 1.02
SORT1-203ENST00000471996 FAM193BQ96PV7 902 aaPredicted RBP21.4■■□□□ 1.02
SORT1-203ENST00000471996 HERC2P3Q9BVR0 1158 aa21.4■■□□□ 1.02
SORT1-203ENST00000471996 KANSL3Q9P2N6 904 aa21.4■■□□□ 1.02
SORT1-203ENST00000471996 PCDHB2Q9Y5E7 798 aa21.4■■□□□ 1.02
SORT1-203ENST00000471996 MYH9P35579 1960 aaKnown RBP21.39■■□□□ 1.02
SORT1-203ENST00000471996 IGKV6-21A0A0C4DH24 114 aa21.39■■□□□ 1.01
SORT1-203ENST00000471996 SLC27A2O14975 620 aa21.39■■□□□ 1.01
SORT1-203ENST00000471996 LRRN2O75325 713 aa21.39■■□□□ 1.01
SORT1-203ENST00000471996 MYBP10242 640 aa21.39■■□□□ 1.01
SORT1-203ENST00000471996 CIITAP33076 1130 aa21.39■■□□□ 1.01
SORT1-203ENST00000471996 DNM2P50570 870 aa21.39■■□□□ 1.01
SORT1-203ENST00000471996 RTN1Q16799 776 aa21.39■■□□□ 1.01
SORT1-203ENST00000471996 KIAA0319Q5VV43 1072 aa21.39■■□□□ 1.01
SORT1-203ENST00000471996 TAS1R1Q7RTX1 841 aa21.39■■□□□ 1.01
SORT1-203ENST00000471996 CATSPER4Q7RTX7 472 aa21.39■■□□□ 1.01
SORT1-203ENST00000471996 LENG9Q96B70 501 aa21.39■■□□□ 1.01
SORT1-203ENST00000471996 CEP89Q96ST8 783 aa21.39■■□□□ 1.01
SORT1-203ENST00000471996 PIDD1Q9HB75 910 aa21.39■■□□□ 1.01
SORT1-203ENST00000471996 RXFP1Q9HBX9 757 aa21.39■■□□□ 1.01
SORT1-203ENST00000471996 FBXO4Q9UKT5 387 aa21.39■■□□□ 1.01
SORT1-203ENST00000471996 NUMBLQ9Y6R0 609 aa21.39■■□□□ 1.01
SORT1-203ENST00000471996 FANCMQ8IYD8 2048 aa21.39■■□□□ 1.01
SORT1-203ENST00000471996 ADAMTS3O15072 1205 aa21.38■■□□□ 1.01
SORT1-203ENST00000471996 GET4Q7L5D6 327 aaPredicted RBP21.38■■□□□ 1.01
SORT1-203ENST00000471996 MRPL10Q7Z7H8 261 aaKnown RBP21.38■■□□□ 1.01
SORT1-203ENST00000471996 EXOC6Q8TAG9 804 aa21.38■■□□□ 1.01
SORT1-203ENST00000471996 NIFKQ9BYG3 293 aaKnown RBP21.38■■□□□ 1.01
SORT1-203ENST00000471996 NT5C3AQ9H0P0 336 aa21.38■■□□□ 1.01
SORT1-203ENST00000471996 PLEKHA4Q9H4M7 779 aa21.38■■□□□ 1.01
SORT1-203ENST00000471996 RSAD1Q9HA92 442 aa21.38■■□□□ 1.01
SORT1-203ENST00000471996 MARCH5Q9NX47 278 aa21.38■■□□□ 1.01
SORT1-203ENST00000471996 SUCLA2Q9P2R7 463 aaPredicted RBP21.38■■□□□ 1.01
SORT1-203ENST00000471996 ACACBO00763 2458 aa21.38■■□□□ 1.01
SORT1-203ENST00000471996 CNTNAP2Q9UHC6 1331 aa21.37■■□□□ 1.01
SORT1-203ENST00000471996 PRR5-ARHGAP8B1AHC4 643 aa21.37■■□□□ 1.01
SORT1-203ENST00000471996 C1RP00736 705 aa21.37■■□□□ 1.01
SORT1-203ENST00000471996 SFNP31947 248 aa21.37■■□□□ 1.01
SORT1-203ENST00000471996 ARHGAP8P85298 464 aa21.37■■□□□ 1.01
SORT1-203ENST00000471996 MTERF2Q49AM1 385 aa21.37■■□□□ 1.01
SORT1-203ENST00000471996 RHPN2Q8IUC4 686 aa21.37■■□□□ 1.01
SORT1-203ENST00000471996 RNF168Q8IYW5 571 aaPredicted RBP21.37■■□□□ 1.01
SORT1-203ENST00000471996 BCO2Q9BYV7 579 aa21.37■■□□□ 1.01
SORT1-203ENST00000471996 SPATA6Q9NWH7 488 aaPredicted RBP21.37■■□□□ 1.01
SORT1-203ENST00000471996 SEPT9Q9UHD8 586 aaPredicted RBP21.37■■□□□ 1.01
SORT1-203ENST00000471996 PCDHGA2Q9Y5H1 932 aa21.37■■□□□ 1.01
SORT1-203ENST00000471996 KANSL1LA0AUZ9 987 aa21.36■■□□□ 1.01
SORT1-203ENST00000471996 ESYT2A0FGR8 921 aa21.36■■□□□ 1.01
SORT1-203ENST00000471996 ZBTB43O43298 467 aa21.36■■□□□ 1.01
SORT1-203ENST00000471996 LAMTOR5O43504 91 aa21.36■■□□□ 1.01
SORT1-203ENST00000471996 EFEMP2O95967 443 aa21.36■■□□□ 1.01
SORT1-203ENST00000471996 SPATA31D3P0C874 917 aa21.36■■□□□ 1.01
SORT1-203ENST00000471996 GLUD2P49448 558 aa21.36■■□□□ 1.01
SORT1-203ENST00000471996 JAK3P52333 1124 aa21.36■■□□□ 1.01
SORT1-203ENST00000471996 GPC5P78333 572 aa21.36■■□□□ 1.01
SORT1-203ENST00000471996 XKR3Q5GH77 459 aa21.36■■□□□ 1.01
SORT1-203ENST00000471996 SPATA31D4Q6ZUB0 917 aa21.36■■□□□ 1.01
SORT1-203ENST00000471996 REXO1Q8N1G1 1221 aaKnown RBP21.36■■□□□ 1.01
SORT1-203ENST00000471996 ST13P5Q8NFI4 369 aaPredicted RBP21.36■■□□□ 1.01
SORT1-203ENST00000471996 ATRIPQ8WXE1 791 aa21.36■■□□□ 1.01
SORT1-203ENST00000471996 RIT2Q99578 217 aa21.36■■□□□ 1.01
SORT1-203ENST00000471996 RPP25Q9BUL9 199 aaKnown RBP21.36■■□□□ 1.01
SORT1-203ENST00000471996 DDX23Q9BUQ8 820 aaKnown RBP21.36■■□□□ 1.01
SORT1-203ENST00000471996 PRKD2Q9BZL6 878 aa21.36■■□□□ 1.01
SORT1-203ENST00000471996 LSG1Q9H089 658 aaKnown RBP21.36■■□□□ 1.01
SORT1-203ENST00000471996 ZMYND12Q9H0C1 365 aa21.36■■□□□ 1.01
SORT1-203ENST00000471996 AGPAT5Q9NUQ2 364 aa21.36■■□□□ 1.01
SORT1-203ENST00000471996 ZDHHC7Q9NXF8 308 aa21.36■■□□□ 1.01
SORT1-203ENST00000471996 BRPF3Q9ULD4 1205 aa21.36■■□□□ 1.01
SORT1-203ENST00000471996 PRG3Q9Y2Y8 225 aaPredicted RBP21.36■■□□□ 1.01
SORT1-203ENST00000471996 ZFP37Q9Y6Q3 630 aaPredicted RBP21.36■■□□□ 1.01
SORT1-203ENST00000471996 CACNA1IQ9P0X4 2223 aa21.35■■□□□ 1.01
SORT1-203ENST00000471996 MSH4O15457 936 aa21.35■■□□□ 1.01
SORT1-203ENST00000471996 CHMP2AO43633 222 aa21.35■■□□□ 1.01
SORT1-203ENST00000471996 GAS2O43903 313 aaKnown RBP21.35■■□□□ 1.01
SORT1-203ENST00000471996 POMCP01189 267 aa21.35■■□□□ 1.01
SORT1-203ENST00000471996 DSG1Q02413 1049 aa21.35■■□□□ 1.01
SORT1-203ENST00000471996 LMNB2Q03252 620 aa21.35■■□□□ 1.01
SORT1-203ENST00000471996 PFKFB3Q16875 520 aaPredicted RBP21.35■■□□□ 1.01
SORT1-203ENST00000471996 CREB3L3Q68CJ9 461 aa21.35■■□□□ 1.01
SORT1-203ENST00000471996 KSR1Q8IVT5 923 aa21.35■■□□□ 1.01
SORT1-203ENST00000471996 SECISBP2LQ93073 1101 aaKnown RBP21.35■■□□□ 1.01
SORT1-203ENST00000471996 PHKBQ93100 1093 aa21.35■■□□□ 1.01
SORT1-203ENST00000471996 NLRP4Q96MN2 994 aa21.35■■□□□ 1.01
SORT1-203ENST00000471996 UNC45AQ9H3U1 944 aa21.35■■□□□ 1.01
SORT1-203ENST00000471996 FAM217BQ9NTX9 383 aaPredicted RBP21.35■■□□□ 1.01
SORT1-203ENST00000471996 CDV3Q9UKY7 258 aaKnown RBP21.35■■□□□ 1.01
SORT1-203ENST00000471996 TMEM150BA6NC51 233 aa21.34■■□□□ 1.01
SORT1-203ENST00000471996 GAS7O60861 476 aa21.34■■□□□ 1.01
SORT1-203ENST00000471996 MAFO75444 373 aaPredicted RBP21.34■■□□□ 1.01
SORT1-203ENST00000471996 STBD1O95210 358 aa21.34■■□□□ 1.01
SORT1-203ENST00000471996 OR1G1P47890 313 aa21.34■■□□□ 1.01
SORT1-203ENST00000471996 CSTF1Q05048 431 aaKnown RBP21.34■■□□□ 1.01
SORT1-203ENST00000471996 SNW1Q13573 536 aaKnown RBP21.34■■□□□ 1.01
SORT1-203ENST00000471996 NECTIN1Q15223 517 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms