RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 HOXA3O43365 443 aaPredicted RBP6.82□□□□□ -1.32
CD46-213ENST00000471987 CDC45O75419 566 aa6.82□□□□□ -1.32
CD46-213ENST00000471987 RPS6KA4O75676 772 aa6.82□□□□□ -1.32
CD46-213ENST00000471987 STC2O76061 302 aa6.82□□□□□ -1.32
CD46-213ENST00000471987 LY86O95711 162 aa6.82□□□□□ -1.32
CD46-213ENST00000471987 PFKMP08237 780 aa6.82□□□□□ -1.32
CD46-213ENST00000471987 XPAP23025 273 aaPredicted RBP6.82□□□□□ -1.32
CD46-213ENST00000471987 LSP1P33241 339 aa6.82□□□□□ -1.32
CD46-213ENST00000471987 GPR15P49685 360 aa6.82□□□□□ -1.32
CD46-213ENST00000471987 PCBP1Q15365 356 aaKnown RBP eCLIP6.82□□□□□ -1.32
CD46-213ENST00000471987 ZBTB41Q5SVQ8 909 aa6.82□□□□□ -1.32
CD46-213ENST00000471987 DHX37Q8IY37 1157 aaKnown RBP6.82□□□□□ -1.32
CD46-213ENST00000471987 ZNF276Q8N554 614 aa6.82□□□□□ -1.32
CD46-213ENST00000471987 GAB3Q8WWW8 586 aa6.82□□□□□ -1.32
CD46-213ENST00000471987 GPR101Q96P66 508 aaPredicted RBP6.82□□□□□ -1.32
CD46-213ENST00000471987 FEZ1Q99689 392 aa6.82□□□□□ -1.32
CD46-213ENST00000471987 EPC1Q9H2F5 836 aa6.82□□□□□ -1.32
CD46-213ENST00000471987 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.82□□□□□ -1.32
CD46-213ENST00000471987 USP18Q9UMW8 372 aa6.82□□□□□ -1.32
CD46-213ENST00000471987 RAMP2O60895 175 aa6.81□□□□□ -1.32
CD46-213ENST00000471987 SEC24DO94855 1032 aaPredicted RBP6.81□□□□□ -1.32
CD46-213ENST00000471987 METTL24Q5JXM2 366 aa6.81□□□□□ -1.32
CD46-213ENST00000471987 C11orf74Q86VG3 221 aa6.81□□□□□ -1.32
CD46-213ENST00000471987 OR5M3Q8NGP4 307 aa6.81□□□□□ -1.32
CD46-213ENST00000471987 OR2W6PQ8NHA6 318 aa6.81□□□□□ -1.32
CD46-213ENST00000471987 PDCD2LQ9BRP1 358 aa6.81□□□□□ -1.32
CD46-213ENST00000471987 TARS2Q9BW92 718 aaKnown RBP6.81□□□□□ -1.32
CD46-213ENST00000471987 ENKD1Q9H0I2 346 aa6.81□□□□□ -1.32
CD46-213ENST00000471987 TMEM191CA6NGB0 347 aa6.8□□□□□ -1.32
CD46-213ENST00000471987 HK1P19367 917 aa6.8□□□□□ -1.32
CD46-213ENST00000471987 LSSP48449 732 aa6.8□□□□□ -1.32
CD46-213ENST00000471987 WNT3AP56704 352 aa6.8□□□□□ -1.32
CD46-213ENST00000471987 NRG3P56975 720 aa6.8□□□□□ -1.32
CD46-213ENST00000471987 IL2P60568 153 aa6.8□□□□□ -1.32
CD46-213ENST00000471987 TERF2Q15554 542 aa6.8□□□□□ -1.32
CD46-213ENST00000471987 FAM214AQ32MH5 1076 aa6.8□□□□□ -1.32
CD46-213ENST00000471987 LMBR1LQ6UX01 489 aa6.8□□□□□ -1.32
CD46-213ENST00000471987 TAS1R1Q7RTX1 841 aa6.8□□□□□ -1.32
CD46-213ENST00000471987 MRGPREQ86SM8 312 aa6.8□□□□□ -1.32
CD46-213ENST00000471987 SYNE4Q8N205 404 aa6.8□□□□□ -1.32
CD46-213ENST00000471987 LENG9Q96B70 501 aa6.8□□□□□ -1.32
CD46-213ENST00000471987 MFSD3Q96ES6 412 aa6.8□□□□□ -1.32
CD46-213ENST00000471987 CPPED1Q9BRF8 314 aaPredicted RBP6.8□□□□□ -1.32
CD46-213ENST00000471987 WNT8AQ9H1J5 351 aa6.8□□□□□ -1.32
CD46-213ENST00000471987 SPTLC3Q9NUV7 552 aa6.8□□□□□ -1.32
CD46-213ENST00000471987 NUMBLQ9Y6R0 609 aa6.8□□□□□ -1.32
CD46-213ENST00000471987 GRXCR1A8MXD5 290 aa6.79□□□□□ -1.32
CD46-213ENST00000471987 PPFIA4O75335 1185 aa6.79□□□□□ -1.32
CD46-213ENST00000471987 RECQL4O94761 1208 aa6.79□□□□□ -1.32
CD46-213ENST00000471987 CASRP41180 1078 aa6.79□□□□□ -1.32
CD46-213ENST00000471987 SEPT7Q16181 437 aaKnown RBP6.79□□□□□ -1.32
CD46-213ENST00000471987 FRMD7Q6ZUT3 714 aa6.79□□□□□ -1.32
CD46-213ENST00000471987 FAM83AQ86UY5 434 aa6.79□□□□□ -1.32
CD46-213ENST00000471987 GLB1L3Q8NCI6 653 aaPredicted RBP6.79□□□□□ -1.32
CD46-213ENST00000471987 RSAD2Q8WXG1 361 aa6.79□□□□□ -1.32
CD46-213ENST00000471987 IL17RAQ96F46 866 aa6.79□□□□□ -1.32
CD46-213ENST00000471987 FDXACB1Q9BRP7 624 aaPredicted RBP6.79□□□□□ -1.32
CD46-213ENST00000471987 TTPALQ9BTX7 342 aa6.79□□□□□ -1.32
CD46-213ENST00000471987 KCNG1Q9UIX4 513 aa6.79□□□□□ -1.32
CD46-213ENST00000471987 SORCS3Q9UPU3 1222 aa6.79□□□□□ -1.32
CD46-213ENST00000471987 DMRT1Q9Y5R6 373 aa6.79□□□□□ -1.32
CD46-213ENST00000471987 PRSS38A1L453 326 aa6.78□□□□□ -1.32
CD46-213ENST00000471987 DNAJC6O75061 913 aa6.78□□□□□ -1.32
CD46-213ENST00000471987 RAB11FIP3O75154 756 aa6.78□□□□□ -1.32
CD46-213ENST00000471987 FKBP9O95302 570 aa6.78□□□□□ -1.32
CD46-213ENST00000471987 KRT4P19013 534 aa6.78□□□□□ -1.32
CD46-213ENST00000471987 DUSP2Q05923 314 aa6.78□□□□□ -1.32
CD46-213ENST00000471987 MRPL49Q13405 166 aaKnown RBP6.78□□□□□ -1.32
CD46-213ENST00000471987 DALRD3Q5D0E6 543 aaKnown RBP6.78□□□□□ -1.32
CD46-213ENST00000471987 Q6ZPA2 131 aa6.78□□□□□ -1.32
CD46-213ENST00000471987 FKBP9P1Q75LS8 142 aa6.78□□□□□ -1.32
CD46-213ENST00000471987 CXorf67Q86X51 503 aaPredicted RBP6.78□□□□□ -1.32
CD46-213ENST00000471987 GLB1L2Q8IW92 636 aa6.78□□□□□ -1.32
CD46-213ENST00000471987 FZD1Q9UP38 647 aa6.78□□□□□ -1.32
CD46-213ENST00000471987 MRPL42Q9Y6G3 142 aaKnown RBP6.78□□□□□ -1.32
CD46-213ENST00000471987 A0A1W2PR48 441 aa6.77□□□□□ -1.33
CD46-213ENST00000471987 LCHNA4D1U4 455 aa6.77□□□□□ -1.33
CD46-213ENST00000471987 TRIM24O15164 1050 aa6.77□□□□□ -1.33
CD46-213ENST00000471987 FOXN1O15353 648 aa6.77□□□□□ -1.33
CD46-213ENST00000471987 ADCYAP1R1P41586 468 aa6.77□□□□□ -1.33
CD46-213ENST00000471987 GZMKP49863 264 aa6.77□□□□□ -1.33
CD46-213ENST00000471987 PPARAQ07869 468 aa6.77□□□□□ -1.33
CD46-213ENST00000471987 MGAT5Q09328 741 aa6.77□□□□□ -1.33
CD46-213ENST00000471987 LAIR1Q6GTX8 287 aa6.77□□□□□ -1.33
CD46-213ENST00000471987 PCSK4Q6UW60 755 aa6.77□□□□□ -1.33
CD46-213ENST00000471987 RHOUQ7L0Q8 258 aa6.77□□□□□ -1.33
CD46-213ENST00000471987 RPUSD2Q8IZ73 545 aaKnown RBP6.77□□□□□ -1.33
CD46-213ENST00000471987 CPT1CQ8TCG5 803 aa6.77□□□□□ -1.33
CD46-213ENST00000471987 FAM193BQ96PV7 902 aaPredicted RBP6.77□□□□□ -1.33
CD46-213ENST00000471987 AGAP2Q99490 1192 aa6.77□□□□□ -1.33
CD46-213ENST00000471987 HDAC5Q9UQL6 1122 aa6.77□□□□□ -1.33
CD46-213ENST00000471987 PPP2R3BQ9Y5P8 575 aa6.77□□□□□ -1.33
CD46-213ENST00000471987 SCAF4O95104 1147 aaKnown RBP6.76□□□□□ -1.33
CD46-213ENST00000471987 CFBP00751 764 aa6.76□□□□□ -1.33
CD46-213ENST00000471987 ITGB1P05556 798 aa6.76□□□□□ -1.33
CD46-213ENST00000471987 GYPEP15421 78 aa6.76□□□□□ -1.33
CD46-213ENST00000471987 MANFP55145 182 aaKnown RBP6.76□□□□□ -1.33
CD46-213ENST00000471987 DDB1Q16531 1140 aa6.76□□□□□ -1.33
CD46-213ENST00000471987 LY6G5CQ5SRR4 150 aa6.76□□□□□ -1.33
CD46-213ENST00000471987 IQSEC1Q6DN90 963 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms