RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 WDFY4Q6ZS81 3184 aa20.96■□□□□ 0.95
COMMD1-207ENST00000471704 RAB27AP51159 221 aa20.96■□□□□ 0.95
COMMD1-207ENST00000471704 ANKRD54Q6NXT1 300 aa20.96■□□□□ 0.95
COMMD1-207ENST00000471704 SYCE2Q6PIF2 218 aa20.96■□□□□ 0.95
COMMD1-207ENST00000471704 RNF149Q8NC42 400 aa20.96■□□□□ 0.95
COMMD1-207ENST00000471704 ASAP3Q8TDY4 903 aa20.96■□□□□ 0.95
COMMD1-207ENST00000471704 TCP11Q8WWU5 503 aa20.96■□□□□ 0.95
COMMD1-207ENST00000471704 PHF7Q9BWX1 381 aaPredicted RBP20.96■□□□□ 0.95
COMMD1-207ENST00000471704 C2orf71A6NGG8 1288 aa20.95■□□□□ 0.94
COMMD1-207ENST00000471704 OFD1O75665 1012 aa20.95■□□□□ 0.94
COMMD1-207ENST00000471704 HOXA11P31270 313 aaPredicted RBP20.95■□□□□ 0.94
COMMD1-207ENST00000471704 ALDH7A1P49419 539 aaKnown RBP20.95■□□□□ 0.94
COMMD1-207ENST00000471704 CAPSQ13938 189 aa20.95■□□□□ 0.94
COMMD1-207ENST00000471704 LONRF3Q496Y0 759 aa20.95■□□□□ 0.94
COMMD1-207ENST00000471704 UBXN11Q5T124 520 aa20.95■□□□□ 0.94
COMMD1-207ENST00000471704 TMC7Q7Z402 723 aa20.95■□□□□ 0.94
COMMD1-207ENST00000471704 SRGAP1Q7Z6B7 1085 aa20.95■□□□□ 0.94
COMMD1-207ENST00000471704 TUFT1Q9NNX1 390 aa20.95■□□□□ 0.94
COMMD1-207ENST00000471704 TBC1D13Q9NVG8 400 aa20.95■□□□□ 0.94
COMMD1-207ENST00000471704 PCDHB6Q9Y5E3 794 aa20.95■□□□□ 0.94
COMMD1-207ENST00000471704 PCDHB2Q9Y5E7 798 aa20.95■□□□□ 0.94
COMMD1-207ENST00000471704 PIEZO1Q92508 2521 aa20.94■□□□□ 0.94
COMMD1-207ENST00000471704 NT5C1B-RDH14C9J2C7 533 aa20.94■□□□□ 0.94
COMMD1-207ENST00000471704 ASAP2O43150 1006 aa20.94■□□□□ 0.94
COMMD1-207ENST00000471704 DGAT1O75907 488 aa20.94■□□□□ 0.94
COMMD1-207ENST00000471704 HOXB8P17481 243 aaPredicted RBP20.94■□□□□ 0.94
COMMD1-207ENST00000471704 ARL2P36404 184 aa20.94■□□□□ 0.94
COMMD1-207ENST00000471704 TRAPPC10P48553 1259 aa20.94■□□□□ 0.94
COMMD1-207ENST00000471704 GNL2Q13823 731 aaKnown RBP20.94■□□□□ 0.94
COMMD1-207ENST00000471704 SMC1AQ14683 1233 aaKnown RBP20.94■□□□□ 0.94
COMMD1-207ENST00000471704 NOMO2Q5JPE7 1267 aa20.94■□□□□ 0.94
COMMD1-207ENST00000471704 POTEGQ6S5H5 508 aa20.94■□□□□ 0.94
COMMD1-207ENST00000471704 GLB1LQ6UWU2 654 aa20.94■□□□□ 0.94
COMMD1-207ENST00000471704 MRPL10Q7Z7H8 261 aaKnown RBP20.94■□□□□ 0.94
COMMD1-207ENST00000471704 TMEM173Q86WV6 379 aaPredicted RBP20.94■□□□□ 0.94
COMMD1-207ENST00000471704 EDAQ92838 391 aa20.94■□□□□ 0.94
COMMD1-207ENST00000471704 POLR3CQ9BUI4 534 aaPredicted RBP20.94■□□□□ 0.94
COMMD1-207ENST00000471704 NRDE2Q9H7Z3 1164 aa20.94■□□□□ 0.94
COMMD1-207ENST00000471704 CARNS1A5YM72 827 aa20.93■□□□□ 0.94
COMMD1-207ENST00000471704 SRGAP2BP0DMP2 458 aa20.93■□□□□ 0.94
COMMD1-207ENST00000471704 XRCC6P12956 609 aaKnown RBP eCLIP20.93■□□□□ 0.94
COMMD1-207ENST00000471704 GLRA2P23416 452 aa20.93■□□□□ 0.94
COMMD1-207ENST00000471704 ECM1Q16610 540 aa20.93■□□□□ 0.94
COMMD1-207ENST00000471704 AGMOQ6ZNB7 445 aa20.93■□□□□ 0.94
COMMD1-207ENST00000471704 IFNLR1Q8IU57 520 aaPredicted RBP20.93■□□□□ 0.94
COMMD1-207ENST00000471704 UPF2Q9HAU5 1272 aaKnown RBP20.93■□□□□ 0.94
COMMD1-207ENST00000471704 GPRC5CQ9NQ84 441 aa20.93■□□□□ 0.94
COMMD1-207ENST00000471704 TDRD15B5MCY1 1934 aaKnown RBP20.92■□□□□ 0.94
COMMD1-207ENST00000471704 USO1O60763 962 aaKnown RBP20.92■□□□□ 0.94
COMMD1-207ENST00000471704 ZC3H11AO75152 810 aaKnown RBP eCLIP20.92■□□□□ 0.94
COMMD1-207ENST00000471704 GALTP07902 379 aa20.92■□□□□ 0.94
COMMD1-207ENST00000471704 RPA1P27694 616 aa20.92■□□□□ 0.94
COMMD1-207ENST00000471704 GJB2P29033 226 aa20.92■□□□□ 0.94
COMMD1-207ENST00000471704 FXR2P51116 673 aaKnown RBP eCLIP20.92■□□□□ 0.94
COMMD1-207ENST00000471704 PTENP60484 403 aa20.92■□□□□ 0.94
COMMD1-207ENST00000471704 AMHR2Q16671 573 aa20.92■□□□□ 0.94
COMMD1-207ENST00000471704 LLGL2Q6P1M3 1020 aa20.92■□□□□ 0.94
COMMD1-207ENST00000471704 HFE2Q6ZVN8 426 aa20.92■□□□□ 0.94
COMMD1-207ENST00000471704 DDX53Q86TM3 631 aaKnown RBP20.92■□□□□ 0.94
COMMD1-207ENST00000471704 PGBD4Q96DM1 585 aa20.92■□□□□ 0.94
COMMD1-207ENST00000471704 TMEM169Q96HH4 297 aa20.92■□□□□ 0.94
COMMD1-207ENST00000471704 IGSF21Q96ID5 467 aa20.92■□□□□ 0.94
COMMD1-207ENST00000471704 ZBP1Q9H171 429 aa20.92■□□□□ 0.94
COMMD1-207ENST00000471704 DBR1Q9UK59 544 aaKnown RBP20.92■□□□□ 0.94
COMMD1-207ENST00000471704 NOL7Q9UMY1 257 aaKnown RBP20.92■□□□□ 0.94
COMMD1-207ENST00000471704 HCFC2Q9Y5Z7 792 aa20.92■□□□□ 0.94
COMMD1-207ENST00000471704 IRAK3Q9Y616 596 aa20.92■□□□□ 0.94
COMMD1-207ENST00000471704 B4GALT3O60512 393 aa20.91■□□□□ 0.94
COMMD1-207ENST00000471704 TSPAN1O60635 241 aa20.91■□□□□ 0.94
COMMD1-207ENST00000471704 CLASP2O75122 1294 aaKnown RBP20.91■□□□□ 0.94
COMMD1-207ENST00000471704 CXCL14O95715 111 aa20.91■□□□□ 0.94
COMMD1-207ENST00000471704 MBTD1Q05BQ5 628 aa20.91■□□□□ 0.94
COMMD1-207ENST00000471704 PTGDRQ13258 359 aa20.91■□□□□ 0.94
COMMD1-207ENST00000471704 MXD4Q14582 209 aaPredicted RBP20.91■□□□□ 0.94
COMMD1-207ENST00000471704 IL17AQ16552 155 aa20.91■□□□□ 0.94
COMMD1-207ENST00000471704 VPS52Q8N1B4 723 aa20.91■□□□□ 0.94
COMMD1-207ENST00000471704 BCL7CQ8WUZ0 217 aaPredicted RBP20.91■□□□□ 0.94
COMMD1-207ENST00000471704 CASP10Q92851 521 aa20.91■□□□□ 0.94
COMMD1-207ENST00000471704 POLR3FQ9H1D9 316 aaPredicted RBP20.91■□□□□ 0.94
COMMD1-207ENST00000471704 HOXD11P31277 338 aaPredicted RBP20.9■□□□□ 0.94
COMMD1-207ENST00000471704 AFF1P51825 1210 aaKnown RBP20.9■□□□□ 0.94
COMMD1-207ENST00000471704 POU5F1BQ06416 359 aa20.9■□□□□ 0.94
COMMD1-207ENST00000471704 MAEAQ7L5Y9 396 aa20.9■□□□□ 0.94
COMMD1-207ENST00000471704 ZNF280BQ86YH2 543 aa20.9■□□□□ 0.94
COMMD1-207ENST00000471704 IGSF22Q8N9C0 903 aa20.9■□□□□ 0.94
COMMD1-207ENST00000471704 SMG8Q8ND04 991 aaKnown RBP20.9■□□□□ 0.94
COMMD1-207ENST00000471704 CPB2Q96IY4 423 aa20.9■□□□□ 0.94
COMMD1-207ENST00000471704 RPGRIP1Q96KN7 1286 aa20.9■□□□□ 0.94
COMMD1-207ENST00000471704 VN1R3Q9BXE9 311 aa20.9■□□□□ 0.94
COMMD1-207ENST00000471704 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.9■□□□□ 0.94
COMMD1-207ENST00000471704 DNAJB4Q9UDY4 337 aa20.9■□□□□ 0.94
COMMD1-207ENST00000471704 INPP5FQ9Y2H2 1132 aa20.9■□□□□ 0.94
COMMD1-207ENST00000471704 MYO10Q9HD67 2058 aa20.89■□□□□ 0.93
COMMD1-207ENST00000471704 CNTNAP2Q9UHC6 1331 aa20.89■□□□□ 0.93
COMMD1-207ENST00000471704 CTSAP10619 480 aa20.89■□□□□ 0.93
COMMD1-207ENST00000471704 SLC11A1P49279 550 aa20.89■□□□□ 0.93
COMMD1-207ENST00000471704 BMS1Q14692 1282 aaKnown RBP20.89■□□□□ 0.93
COMMD1-207ENST00000471704 PCBP1Q15365 356 aaKnown RBP eCLIP20.89■□□□□ 0.93
COMMD1-207ENST00000471704 BMP8AQ7Z5Y6 402 aa20.89■□□□□ 0.93
COMMD1-207ENST00000471704 CCDC43Q96MW1 224 aaKnown RBP20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms