RNA–Protein interactions for RNA: ENST00000471423.1

VPS72-204, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 2

Gene VPS72, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-204ENST00000471423 NOTUMQ6P988 496 aa19.55■□□□□ 0.72
VPS72-204ENST00000471423 DYMQ7RTS9 669 aa19.55■□□□□ 0.72
VPS72-204ENST00000471423 SPRED2Q7Z698 418 aa19.55■□□□□ 0.72
VPS72-204ENST00000471423 ZNF689Q96CS4 500 aaPredicted RBP19.55■□□□□ 0.72
VPS72-204ENST00000471423 PRIMPOLQ96LW4 560 aa19.55■□□□□ 0.72
VPS72-204ENST00000471423 TRAIPQ9BWF2 469 aa19.55■□□□□ 0.72
VPS72-204ENST00000471423 ZHX3Q9H4I2 956 aa19.55■□□□□ 0.72
VPS72-204ENST00000471423 FAM105AQ9NUU6 356 aa19.55■□□□□ 0.72
VPS72-204ENST00000471423 RNF216Q9NWF9 866 aaPredicted RBP19.55■□□□□ 0.72
VPS72-204ENST00000471423 ARHGAP28Q9P2N2 729 aa19.55■□□□□ 0.72
VPS72-204ENST00000471423 PHLPP2Q6ZVD8 1323 aa19.54■□□□□ 0.72
VPS72-204ENST00000471423 TTLL13PA6NNM8 815 aa19.54■□□□□ 0.72
VPS72-204ENST00000471423 SLC16A4O15374 487 aa19.54■□□□□ 0.72
VPS72-204ENST00000471423 POLR2DO15514 142 aaKnown RBP19.54■□□□□ 0.72
VPS72-204ENST00000471423 RAB27AP51159 221 aa19.54■□□□□ 0.72
VPS72-204ENST00000471423 ZNF131P52739 623 aa19.54■□□□□ 0.72
VPS72-204ENST00000471423 TPRNQ4KMQ1 711 aa19.54■□□□□ 0.72
VPS72-204ENST00000471423 PAN2Q504Q3 1202 aaKnown RBP19.54■□□□□ 0.72
VPS72-204ENST00000471423 ZNF598Q86UK7 904 aaKnown RBP19.54■□□□□ 0.72
VPS72-204ENST00000471423 IQUBQ8NA54 791 aa19.54■□□□□ 0.72
VPS72-204ENST00000471423 SPIRE2Q8WWL2 714 aa19.54■□□□□ 0.72
VPS72-204ENST00000471423 DDX12PQ92771 950 aa19.54■□□□□ 0.72
VPS72-204ENST00000471423 CERS4Q9HA82 394 aa19.54■□□□□ 0.72
VPS72-204ENST00000471423 PARVGQ9HBI0 331 aa19.54■□□□□ 0.72
VPS72-204ENST00000471423 TSHZ2Q9NRE2 1034 aa19.54■□□□□ 0.72
VPS72-204ENST00000471423 LARSQ9P2J5 1176 aaKnown RBP19.54■□□□□ 0.72
VPS72-204ENST00000471423 USP20Q9Y2K6 914 aa19.54■□□□□ 0.72
VPS72-204ENST00000471423 RBM19Q9Y4C8 960 aaKnown RBP19.54■□□□□ 0.72
VPS72-204ENST00000471423 ACKR2O00590 384 aa19.53■□□□□ 0.72
VPS72-204ENST00000471423 PFKFB1P16118 471 aa19.53■□□□□ 0.72
VPS72-204ENST00000471423 PRPF4BQ13523 1007 aaKnown RBP19.53■□□□□ 0.72
VPS72-204ENST00000471423 BTG3Q14201 252 aaPredicted RBP19.53■□□□□ 0.72
VPS72-204ENST00000471423 TMEM132AQ24JP5 1023 aa19.53■□□□□ 0.72
VPS72-204ENST00000471423 LONRF3Q496Y0 759 aa19.53■□□□□ 0.72
VPS72-204ENST00000471423 TAS1R3Q7RTX0 852 aa19.53■□□□□ 0.72
VPS72-204ENST00000471423 CDR2LQ86X02 465 aaPredicted RBP19.53■□□□□ 0.72
VPS72-204ENST00000471423 MYCT1Q8N699 235 aa19.53■□□□□ 0.72
VPS72-204ENST00000471423 STAMQ92783 540 aa19.53■□□□□ 0.72
VPS72-204ENST00000471423 CCDC51Q96ER9 411 aa19.53■□□□□ 0.72
VPS72-204ENST00000471423 NTPCRQ9BSD7 190 aaKnown RBP19.53■□□□□ 0.72
VPS72-204ENST00000471423 EIF2AQ9BY44 585 aaKnown RBP19.53■□□□□ 0.72
VPS72-204ENST00000471423 CUEDC2Q9H467 287 aa19.53■□□□□ 0.72
VPS72-204ENST00000471423 RNF19AQ9NV58 838 aa19.53■□□□□ 0.72
VPS72-204ENST00000471423 CHMP5Q9NZZ3 219 aa19.53■□□□□ 0.72
VPS72-204ENST00000471423 KCNH3Q9ULD8 1083 aa19.53■□□□□ 0.72
VPS72-204ENST00000471423 PCDHB2Q9Y5E7 798 aa19.53■□□□□ 0.72
VPS72-204ENST00000471423 CHD7Q9P2D1 2997 aa19.53■□□□□ 0.72
VPS72-204ENST00000471423 A0A1B0GUA9 196 aa19.52■□□□□ 0.72
VPS72-204ENST00000471423 A0A1B0GVL5 298 aa19.52■□□□□ 0.72
VPS72-204ENST00000471423 TBKBP1A7MCY6 615 aa19.52■□□□□ 0.72
VPS72-204ENST00000471423 K7ERI5 159 aa19.52■□□□□ 0.72
VPS72-204ENST00000471423 EOMESO95936 686 aa19.52■□□□□ 0.72
VPS72-204ENST00000471423 SKIP12755 728 aa19.52■□□□□ 0.72
VPS72-204ENST00000471423 CMA1P23946 247 aa19.52■□□□□ 0.72
VPS72-204ENST00000471423 SMTNP53814 917 aa19.52■□□□□ 0.72
VPS72-204ENST00000471423 GRIN2CQ14957 1233 aa19.52■□□□□ 0.72
VPS72-204ENST00000471423 SLC27A1Q6PCB7 646 aa19.52■□□□□ 0.72
VPS72-204ENST00000471423 CMTR2Q8IYT2 770 aaKnown RBP19.52■□□□□ 0.72
VPS72-204ENST00000471423 FIBCD1Q8N539 461 aa19.52■□□□□ 0.72
VPS72-204ENST00000471423 TMEM161BQ8NDZ6 487 aa19.52■□□□□ 0.72
VPS72-204ENST00000471423 LPPQ93052 612 aa19.52■□□□□ 0.72
VPS72-204ENST00000471423 DNAJC19Q96DA6 116 aa19.52■□□□□ 0.72
VPS72-204ENST00000471423 TNMDQ9H2S6 317 aa19.52■□□□□ 0.72
VPS72-204ENST00000471423 PDZD7Q9H5P4 517 aa19.52■□□□□ 0.72
VPS72-204ENST00000471423 TMEM134Q9H6X4 195 aa19.52■□□□□ 0.72
VPS72-204ENST00000471423 MTMR10Q9NXD2 777 aa19.52■□□□□ 0.72
VPS72-204ENST00000471423 MTUS1Q9ULD2 1270 aa19.52■□□□□ 0.72
VPS72-204ENST00000471423 FNDC1Q4ZHG4 1894 aaPredicted RBP19.52■□□□□ 0.71
VPS72-204ENST00000471423 MEIS3P2A8K0S8 358 aa19.51■□□□□ 0.71
VPS72-204ENST00000471423 K7ENM7 598 aa19.51■□□□□ 0.71
VPS72-204ENST00000471423 HOXA2O43364 376 aa19.51■□□□□ 0.71
VPS72-204ENST00000471423 ZNF623O75123 536 aa19.51■□□□□ 0.71
VPS72-204ENST00000471423 NCKAP1LP55160 1127 aa19.51■□□□□ 0.71
VPS72-204ENST00000471423 CLLU1OSQ5K130 101 aa19.51■□□□□ 0.71
VPS72-204ENST00000471423 NT5DC1Q5TFE4 455 aa19.51■□□□□ 0.71
VPS72-204ENST00000471423 HELQQ8TDG4 1101 aa19.51■□□□□ 0.71
VPS72-204ENST00000471423 ARNTL2Q8WYA1 636 aa19.51■□□□□ 0.71
VPS72-204ENST00000471423 GUCD1Q96NT3 240 aa19.51■□□□□ 0.71
VPS72-204ENST00000471423 TGS1Q96RS0 853 aaKnown RBP19.51■□□□□ 0.71
VPS72-204ENST00000471423 C17orf80Q9BSJ5 609 aa19.51■□□□□ 0.71
VPS72-204ENST00000471423 KBTBD4Q9NVX7 518 aa19.51■□□□□ 0.71
VPS72-204ENST00000471423 KCNG1Q9UIX4 513 aa19.51■□□□□ 0.71
VPS72-204ENST00000471423 HPSEQ9Y251 543 aa19.51■□□□□ 0.71
VPS72-204ENST00000471423 N4BP3O15049 544 aa19.5■□□□□ 0.71
VPS72-204ENST00000471423 TRAK2O60296 914 aa19.5■□□□□ 0.71
VPS72-204ENST00000471423 NPTXRO95502 500 aa19.5■□□□□ 0.71
VPS72-204ENST00000471423 MAPTP10636 758 aaKnown RBP19.5■□□□□ 0.71
VPS72-204ENST00000471423 ATF7IP2Q5U623 682 aa19.5■□□□□ 0.71
VPS72-204ENST00000471423 SFR1Q86XK3 245 aa19.5■□□□□ 0.71
VPS72-204ENST00000471423 ABI1Q8IZP0 508 aa19.5■□□□□ 0.71
VPS72-204ENST00000471423 FSIP1Q8NA03 581 aa19.5■□□□□ 0.71
VPS72-204ENST00000471423 SMG8Q8ND04 991 aaKnown RBP19.5■□□□□ 0.71
VPS72-204ENST00000471423 MRPS27Q92552 414 aaKnown RBP19.5■□□□□ 0.71
VPS72-204ENST00000471423 CASD1Q96PB1 797 aa19.5■□□□□ 0.71
VPS72-204ENST00000471423 PYM1Q9BRP8 204 aaKnown RBP19.5■□□□□ 0.71
VPS72-204ENST00000471423 TRIM6Q9C030 488 aaPredicted RBP19.5■□□□□ 0.71
VPS72-204ENST00000471423 TMEM117Q9H0C3 514 aa19.5■□□□□ 0.71
VPS72-204ENST00000471423 NXF3Q9H4D5 531 aaKnown RBP19.5■□□□□ 0.71
VPS72-204ENST00000471423 PRDM12Q9H4Q4 367 aa19.5■□□□□ 0.71
VPS72-204ENST00000471423 MAGEF1Q9HAY2 307 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms