RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 LDLRAD3Q86YD5 345 aa4.54□□□□□ -1.68
COPS3-206ENST00000471414 ELOA2Q8IYF1 753 aaPredicted RBP4.54□□□□□ -1.68
COPS3-206ENST00000471414 MSL3Q8N5Y2 521 aaKnown RBP4.54□□□□□ -1.68
COPS3-206ENST00000471414 ZNF483Q8TF39 744 aaPredicted RBP4.54□□□□□ -1.68
COPS3-206ENST00000471414 SLC5A5Q92911 643 aa4.54□□□□□ -1.68
COPS3-206ENST00000471414 FERMT2Q96AC1 680 aa4.54□□□□□ -1.68
COPS3-206ENST00000471414 UIMC1Q96RL1 719 aa4.54□□□□□ -1.68
COPS3-206ENST00000471414 PDCD2LQ9BRP1 358 aa4.54□□□□□ -1.68
COPS3-206ENST00000471414 KRTAP17-1Q9BYP8 105 aa4.54□□□□□ -1.68
COPS3-206ENST00000471414 CSRNP2Q9H175 543 aa4.54□□□□□ -1.68
COPS3-206ENST00000471414 GPRC5BQ9NZH0 403 aa4.54□□□□□ -1.68
COPS3-206ENST00000471414 EVLQ9UI08 416 aaPredicted RBP4.54□□□□□ -1.68
COPS3-206ENST00000471414 RCAN3Q9UKA8 241 aa4.54□□□□□ -1.68
COPS3-206ENST00000471414 NRP1O14786 923 aa4.53□□□□□ -1.68
COPS3-206ENST00000471414 HOXA3O43365 443 aaPredicted RBP4.53□□□□□ -1.68
COPS3-206ENST00000471414 SUV39H1O43463 412 aa4.53□□□□□ -1.68
COPS3-206ENST00000471414 KDM1AO60341 852 aa4.53□□□□□ -1.68
COPS3-206ENST00000471414 NRP2O60462 931 aa4.53□□□□□ -1.68
COPS3-206ENST00000471414 TMEM127O75204 238 aa4.53□□□□□ -1.68
COPS3-206ENST00000471414 GYS2P54840 703 aa4.53□□□□□ -1.68
COPS3-206ENST00000471414 NPEPPSP55786 919 aa4.53□□□□□ -1.68
COPS3-206ENST00000471414 WNT3AP56704 352 aa4.53□□□□□ -1.68
COPS3-206ENST00000471414 IL2P60568 153 aa4.53□□□□□ -1.68
COPS3-206ENST00000471414 DPTQ07507 201 aa4.53□□□□□ -1.68
COPS3-206ENST00000471414 CRHR2Q13324 411 aa4.53□□□□□ -1.68
COPS3-206ENST00000471414 FHL2Q14192 279 aa4.53□□□□□ -1.68
COPS3-206ENST00000471414 PDCD1Q15116 288 aa4.53□□□□□ -1.68
COPS3-206ENST00000471414 PITRM1Q5JRX3 1037 aa4.53□□□□□ -1.68
COPS3-206ENST00000471414 KRT40Q6A162 431 aa4.53□□□□□ -1.68
COPS3-206ENST00000471414 GAB3Q8WWW8 586 aa4.53□□□□□ -1.68
COPS3-206ENST00000471414 ST8SIA2Q92186 375 aa4.53□□□□□ -1.68
COPS3-206ENST00000471414 LARP4BQ92615 738 aaKnown RBP4.53□□□□□ -1.68
COPS3-206ENST00000471414 MNTQ99583 582 aa4.53□□□□□ -1.68
COPS3-206ENST00000471414 GPR87Q9BY21 358 aa4.53□□□□□ -1.68
COPS3-206ENST00000471414 MMRN2Q9H8L6 949 aa4.53□□□□□ -1.68
COPS3-206ENST00000471414 TLDC2A0PJX2 215 aa4.52□□□□□ -1.69
COPS3-206ENST00000471414 IPO13O94829 963 aaKnown RBP4.52□□□□□ -1.69
COPS3-206ENST00000471414 MYCLP1P12525 358 aaPredicted RBP4.52□□□□□ -1.69
COPS3-206ENST00000471414 KRT4P19013 534 aa4.52□□□□□ -1.69
COPS3-206ENST00000471414 MEF2AQ02078 507 aaPredicted RBP4.52□□□□□ -1.69
COPS3-206ENST00000471414 MRPL49Q13405 166 aaKnown RBP4.52□□□□□ -1.69
COPS3-206ENST00000471414 SART3Q15020 963 aaKnown RBP4.52□□□□□ -1.69
COPS3-206ENST00000471414 DDB1Q16531 1140 aa4.52□□□□□ -1.69
COPS3-206ENST00000471414 ZNF662Q6ZS27 426 aa4.52□□□□□ -1.69
COPS3-206ENST00000471414 DOK3Q7L591 496 aa4.52□□□□□ -1.69
COPS3-206ENST00000471414 GPRIN1Q7Z2K8 1008 aa4.52□□□□□ -1.69
COPS3-206ENST00000471414 C11orf74Q86VG3 221 aa4.52□□□□□ -1.69
COPS3-206ENST00000471414 ULK2Q8IYT8 1036 aa4.52□□□□□ -1.69
COPS3-206ENST00000471414 LILRA3Q8N6C8 439 aaPredicted RBP4.52□□□□□ -1.69
COPS3-206ENST00000471414 OR52N2Q8NGI0 321 aa4.52□□□□□ -1.69
COPS3-206ENST00000471414 LEO1Q8WVC0 666 aaPredicted RBP4.52□□□□□ -1.69
COPS3-206ENST00000471414 CPEB1Q9BZB8 566 aaKnown RBP4.52□□□□□ -1.69
COPS3-206ENST00000471414 TRIM8Q9BZR9 551 aa4.52□□□□□ -1.69
COPS3-206ENST00000471414 SLITRK6Q9H5Y7 841 aa4.52□□□□□ -1.69
COPS3-206ENST00000471414 NEMP1O14524 444 aa4.51□□□□□ -1.69
COPS3-206ENST00000471414 ZEB2O60315 1214 aa4.51□□□□□ -1.69
COPS3-206ENST00000471414 MAKP20794 623 aa4.51□□□□□ -1.69
COPS3-206ENST00000471414 NR4A1P22736 598 aa4.51□□□□□ -1.69
COPS3-206ENST00000471414 CASRP41180 1078 aa4.51□□□□□ -1.69
COPS3-206ENST00000471414 PPARAQ07869 468 aa4.51□□□□□ -1.69
COPS3-206ENST00000471414 CNGB1Q14028 1251 aaPredicted RBP4.51□□□□□ -1.69
COPS3-206ENST00000471414 CSRP2Q16527 193 aa4.51□□□□□ -1.69
COPS3-206ENST00000471414 FAM214AQ32MH5 1076 aa4.51□□□□□ -1.69
COPS3-206ENST00000471414 ATP13A4Q4VNC1 1196 aa4.51□□□□□ -1.69
COPS3-206ENST00000471414 C19orf54Q5BKX5 351 aa4.51□□□□□ -1.69
COPS3-206ENST00000471414 RABL3Q5HYI8 236 aa4.51□□□□□ -1.69
COPS3-206ENST00000471414 ZNF627Q7L945 461 aa4.51□□□□□ -1.69
COPS3-206ENST00000471414 GSPT2Q8IYD1 628 aaKnown RBP4.51□□□□□ -1.69
COPS3-206ENST00000471414 OR14C36Q8NHC7 312 aa4.51□□□□□ -1.69
COPS3-206ENST00000471414 ATXN2LQ8WWM7 1075 aaKnown RBP4.51□□□□□ -1.69
COPS3-206ENST00000471414 LENG9Q96B70 501 aa4.51□□□□□ -1.69
COPS3-206ENST00000471414 LSM14BQ9BX40 385 aaKnown RBP4.51□□□□□ -1.69
COPS3-206ENST00000471414 USP18Q9UMW8 372 aa4.51□□□□□ -1.69
COPS3-206ENST00000471414 CDY2AQ9Y6F7 541 aa4.51□□□□□ -1.69
COPS3-206ENST00000471414 GOLGA6L6A8MZA4 724 aa4.5□□□□□ -1.69
COPS3-206ENST00000471414 MFAP3LO75121 409 aa4.5□□□□□ -1.69
COPS3-206ENST00000471414 LTA4HP09960 611 aaKnown RBP4.5□□□□□ -1.69
COPS3-206ENST00000471414 CLEC2LP0C7M8 214 aa4.5□□□□□ -1.69
COPS3-206ENST00000471414 GNAT2P19087 354 aa4.5□□□□□ -1.69
COPS3-206ENST00000471414 ZFP36P26651 326 aaKnown RBP4.5□□□□□ -1.69
COPS3-206ENST00000471414 ID4P47928 161 aa4.5□□□□□ -1.69
COPS3-206ENST00000471414 NRG3P56975 720 aa4.5□□□□□ -1.69
COPS3-206ENST00000471414 UBE3CQ15386 1083 aa4.5□□□□□ -1.69
COPS3-206ENST00000471414 FSCN1Q16658 493 aaKnown RBP4.5□□□□□ -1.69
COPS3-206ENST00000471414 GIMAP6Q6P9H5 292 aa4.5□□□□□ -1.69
COPS3-206ENST00000471414 STRA8Q7Z7C7 330 aa4.5□□□□□ -1.69
COPS3-206ENST00000471414 MRGPREQ86SM8 312 aa4.5□□□□□ -1.69
COPS3-206ENST00000471414 GLB1L2Q8IW92 636 aa4.5□□□□□ -1.69
COPS3-206ENST00000471414 AFAP1L2Q8N4X5 818 aa4.5□□□□□ -1.69
COPS3-206ENST00000471414 CLRN3Q8NCR9 226 aa4.5□□□□□ -1.69
COPS3-206ENST00000471414 ARL8AQ96BM9 186 aa4.5□□□□□ -1.69
COPS3-206ENST00000471414 CHFRQ96EP1 664 aa4.5□□□□□ -1.69
COPS3-206ENST00000471414 IL17RAQ96F46 866 aa4.5□□□□□ -1.69
COPS3-206ENST00000471414 ORAI2Q96SN7 254 aa4.5□□□□□ -1.69
COPS3-206ENST00000471414 MENTQ9BUN1 341 aa4.5□□□□□ -1.69
COPS3-206ENST00000471414 ANO3Q9BYT9 981 aa4.5□□□□□ -1.69
COPS3-206ENST00000471414 IKZF4Q9H2S9 585 aa4.5□□□□□ -1.69
COPS3-206ENST00000471414 IFT22Q9H7X7 185 aa4.5□□□□□ -1.69
COPS3-206ENST00000471414 SLC2A4RGQ9NR83 387 aa4.5□□□□□ -1.69
COPS3-206ENST00000471414 TOPORSQ9NS56 1045 aaPredicted RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms