RNA–Protein interactions for RNA: ENST00000470983.5

DNMT3A-209, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-209ENST00000470983 LPPQ93052 612 aa16.66■□□□□ 0.26
DNMT3A-209ENST00000470983 PABPC5Q96DU9 382 aaKnown RBP16.66■□□□□ 0.26
DNMT3A-209ENST00000470983 CALML4Q96GE6 196 aa16.66■□□□□ 0.26
DNMT3A-209ENST00000470983 CPB2Q96IY4 423 aa16.66■□□□□ 0.26
DNMT3A-209ENST00000470983 POP1Q99575 1024 aaKnown RBP16.66■□□□□ 0.26
DNMT3A-209ENST00000470983 KIFC3Q9BVG8 833 aa16.66■□□□□ 0.26
DNMT3A-209ENST00000470983 LMAN2LQ9H0V9 348 aa16.66■□□□□ 0.26
DNMT3A-209ENST00000470983 ELAC1Q9H777 363 aaKnown RBP16.66■□□□□ 0.26
DNMT3A-209ENST00000470983 CHST12Q9NRB3 414 aa16.66■□□□□ 0.26
DNMT3A-209ENST00000470983 DAXXQ9UER7 740 aaPredicted RBP16.66■□□□□ 0.26
DNMT3A-209ENST00000470983 A0A0U1RQF3 1178 aa16.65■□□□□ 0.26
DNMT3A-209ENST00000470983 MEIS3P2A8K0S8 358 aa16.65■□□□□ 0.26
DNMT3A-209ENST00000470983 B4GALT5O43286 388 aa16.65■□□□□ 0.26
DNMT3A-209ENST00000470983 HIP1RO75146 1068 aa16.65■□□□□ 0.26
DNMT3A-209ENST00000470983 PLA2G4BP0C869 781 aa16.65■□□□□ 0.26
DNMT3A-209ENST00000470983 PLCG1P19174 1290 aa16.65■□□□□ 0.26
DNMT3A-209ENST00000470983 HOXA11P31270 313 aaPredicted RBP16.65■□□□□ 0.26
DNMT3A-209ENST00000470983 POU5F1BQ06416 359 aa16.65■□□□□ 0.26
DNMT3A-209ENST00000470983 SLC39A14Q15043 492 aa16.65■□□□□ 0.26
DNMT3A-209ENST00000470983 AMHR2Q16671 573 aa16.65■□□□□ 0.26
DNMT3A-209ENST00000470983 C1orf186Q6ZWK4 172 aa16.65■□□□□ 0.26
DNMT3A-209ENST00000470983 ZNF598Q86UK7 904 aaKnown RBP16.65■□□□□ 0.26
DNMT3A-209ENST00000470983 DAW1Q8N136 415 aa16.65■□□□□ 0.26
DNMT3A-209ENST00000470983 PPP2R3CQ969Q6 453 aa16.65■□□□□ 0.26
DNMT3A-209ENST00000470983 EPSTI1Q96J88 318 aa16.65■□□□□ 0.26
DNMT3A-209ENST00000470983 ZNF396Q96N95 335 aaPredicted RBP16.65■□□□□ 0.26
DNMT3A-209ENST00000470983 NSUN3Q9H649 340 aaKnown RBP16.65■□□□□ 0.26
DNMT3A-209ENST00000470983 FAM105AQ9NUU6 356 aa16.65■□□□□ 0.26
DNMT3A-209ENST00000470983 SRPRBQ9Y5M8 271 aaKnown RBP16.65■□□□□ 0.26
DNMT3A-209ENST00000470983 PLXNA4Q9HCM2 1894 aa16.65■□□□□ 0.26
DNMT3A-209ENST00000470983 TRANK1O15050 2925 aa16.64■□□□□ 0.25
DNMT3A-209ENST00000470983 NPHP3-ACAD11A0A0J9YXS1 232 aa16.64■□□□□ 0.25
DNMT3A-209ENST00000470983 DCXO43602 365 aa16.64■□□□□ 0.25
DNMT3A-209ENST00000470983 LIG1P18858 919 aa16.64■□□□□ 0.25
DNMT3A-209ENST00000470983 SLC12A3P55017 1021 aa16.64■□□□□ 0.25
DNMT3A-209ENST00000470983 CACNB1Q02641 598 aaPredicted RBP16.64■□□□□ 0.25
DNMT3A-209ENST00000470983 MAPK7Q13164 816 aa16.64■□□□□ 0.25
DNMT3A-209ENST00000470983 DHX8Q14562 1220 aaKnown RBP16.64■□□□□ 0.25
DNMT3A-209ENST00000470983 CLLU1OSQ5K130 101 aa16.64■□□□□ 0.25
DNMT3A-209ENST00000470983 UBXN11Q5T124 520 aa16.64■□□□□ 0.25
DNMT3A-209ENST00000470983 CDCA2Q69YH5 1023 aaPredicted RBP16.64■□□□□ 0.25
DNMT3A-209ENST00000470983 CDR2LQ86X02 465 aaPredicted RBP16.64■□□□□ 0.25
DNMT3A-209ENST00000470983 ZBTB8OSQ8IWT0 167 aa16.64■□□□□ 0.25
DNMT3A-209ENST00000470983 SYT2Q8N9I0 419 aaPredicted RBP16.64■□□□□ 0.25
DNMT3A-209ENST00000470983 LINC00301Q8NCQ3 95 aa16.64■□□□□ 0.25
DNMT3A-209ENST00000470983 DEPTORQ8TB45 409 aa16.64■□□□□ 0.25
DNMT3A-209ENST00000470983 HELQQ8TDG4 1101 aa16.64■□□□□ 0.25
DNMT3A-209ENST00000470983 C11orf84Q9BUA3 381 aaPredicted RBP16.64■□□□□ 0.25
DNMT3A-209ENST00000470983 NFKBIZQ9BYH8 718 aa16.64■□□□□ 0.25
DNMT3A-209ENST00000470983 CCSER1Q9C0I3 900 aa16.64■□□□□ 0.25
DNMT3A-209ENST00000470983 BLOC1S4Q9NUP1 217 aa16.64■□□□□ 0.25
DNMT3A-209ENST00000470983 RNF216Q9NWF9 866 aaPredicted RBP16.64■□□□□ 0.25
DNMT3A-209ENST00000470983 USP20Q9Y2K6 914 aa16.64■□□□□ 0.25
DNMT3A-209ENST00000470983 SLC26A4O43511 780 aa16.63■□□□□ 0.25
DNMT3A-209ENST00000470983 EDN1P05305 212 aa16.63■□□□□ 0.25
DNMT3A-209ENST00000470983 ARF4P18085 180 aaPredicted RBP16.63■□□□□ 0.25
DNMT3A-209ENST00000470983 NAMPTP43490 491 aa16.63■□□□□ 0.25
DNMT3A-209ENST00000470983 MCM6Q14566 821 aa16.63■□□□□ 0.25
DNMT3A-209ENST00000470983 PPP2R5AQ15172 486 aa16.63■□□□□ 0.25
DNMT3A-209ENST00000470983 EP400NLQ6ZTU2 488 aa16.63■□□□□ 0.25
DNMT3A-209ENST00000470983 KRI1Q8N9T8 703 aaKnown RBP16.63■□□□□ 0.25
DNMT3A-209ENST00000470983 KIFAP3Q92845 792 aa16.63■□□□□ 0.25
DNMT3A-209ENST00000470983 CLP1Q92989 425 aaKnown RBP16.63■□□□□ 0.25
DNMT3A-209ENST00000470983 CHAMP1Q96JM3 812 aa16.63■□□□□ 0.25
DNMT3A-209ENST00000470983 IFT74Q96LB3 600 aa16.63■□□□□ 0.25
DNMT3A-209ENST00000470983 CASD1Q96PB1 797 aa16.63■□□□□ 0.25
DNMT3A-209ENST00000470983 EIF2AQ9BY44 585 aaKnown RBP16.63■□□□□ 0.25
DNMT3A-209ENST00000470983 TMEM117Q9H0C3 514 aa16.63■□□□□ 0.25
DNMT3A-209ENST00000470983 C11orf16Q9NQ32 467 aa16.63■□□□□ 0.25
DNMT3A-209ENST00000470983 ZDHHC9Q9Y397 364 aa16.63■□□□□ 0.25
DNMT3A-209ENST00000470983 PCDHB2Q9Y5E7 798 aa16.63■□□□□ 0.25
DNMT3A-209ENST00000470983 TCHHQ07283 1943 aa16.62■□□□□ 0.25
DNMT3A-209ENST00000470983 FAM86C2PA6NEL3 165 aa16.62■□□□□ 0.25
DNMT3A-209ENST00000470983 TTLL13PA6NNM8 815 aa16.62■□□□□ 0.25
DNMT3A-209ENST00000470983 SFI1A8K8P3 1242 aa16.62■□□□□ 0.25
DNMT3A-209ENST00000470983 SPTLC2O15270 562 aa16.62■□□□□ 0.25
DNMT3A-209ENST00000470983 CSPG5O95196 566 aa16.62■□□□□ 0.25
DNMT3A-209ENST00000470983 PDIA4P13667 645 aaKnown RBP16.62■□□□□ 0.25
DNMT3A-209ENST00000470983 BMPR1AP36894 532 aa16.62■□□□□ 0.25
DNMT3A-209ENST00000470983 RAB27AP51159 221 aa16.62■□□□□ 0.25
DNMT3A-209ENST00000470983 PEX3P56589 373 aa16.62■□□□□ 0.25
DNMT3A-209ENST00000470983 BECN1Q14457 450 aa16.62■□□□□ 0.25
DNMT3A-209ENST00000470983 SPOUT1Q5T280 376 aaKnown RBP16.62■□□□□ 0.25
DNMT3A-209ENST00000470983 NOTUMQ6P988 496 aa16.62■□□□□ 0.25
DNMT3A-209ENST00000470983 GPBP1Q86WP2 473 aa16.62■□□□□ 0.25
DNMT3A-209ENST00000470983 ABI1Q8IZP0 508 aa16.62■□□□□ 0.25
DNMT3A-209ENST00000470983 RAD54LQ92698 747 aa16.62■□□□□ 0.25
DNMT3A-209ENST00000470983 TRAIPQ9BWF2 469 aa16.62■□□□□ 0.25
DNMT3A-209ENST00000470983 C2orf40Q9H1Z8 148 aa16.62■□□□□ 0.25
DNMT3A-209ENST00000470983 CD320Q9NPF0 282 aa16.62■□□□□ 0.25
DNMT3A-209ENST00000470983 MORC2Q9Y6X9 1032 aaPredicted RBP16.62■□□□□ 0.25
DNMT3A-209ENST00000470983 CCDC169A6NNP5 214 aa16.61■□□□□ 0.25
DNMT3A-209ENST00000470983 C5orf67F2Z3F1 127 aa16.61■□□□□ 0.25
DNMT3A-209ENST00000470983 HOXA2O43364 376 aa16.61■□□□□ 0.25
DNMT3A-209ENST00000470983 YEATS4O95619 227 aa16.61■□□□□ 0.25
DNMT3A-209ENST00000470983 BRD1O95696 1058 aa16.61■□□□□ 0.25
DNMT3A-209ENST00000470983 EOMESO95936 686 aa16.61■□□□□ 0.25
DNMT3A-209ENST00000470983 PRKCBP05771 671 aa16.61■□□□□ 0.25
DNMT3A-209ENST00000470983 SKIP12755 728 aa16.61■□□□□ 0.25
DNMT3A-209ENST00000470983 IL9P15248 144 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms