RNA–Protein interactions for RNA: ENST00000470668.5

HDAC7-219, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 4,266 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-219ENST00000470668 USP17L19D6RCP7 530 aa15.16■□□□□ 0.02
HDAC7-219ENST00000470668 USP17L20D6RJB6 530 aa15.16■□□□□ 0.02
HDAC7-219ENST00000470668 USP17L24Q0WX57 530 aa15.16■□□□□ 0.02
HDAC7-219ENST00000470668 NR1H3Q13133 447 aa15.16■□□□□ 0.02
HDAC7-219ENST00000470668 USP17L6PQ6QN14 398 aa15.16■□□□□ 0.02
HDAC7-219ENST00000470668 LCA5Q86VQ0 697 aa15.16■□□□□ 0.02
HDAC7-219ENST00000470668 ICA1LQ8NDH6 482 aa15.16■□□□□ 0.02
HDAC7-219ENST00000470668 MIS12Q9H081 205 aa15.16■□□□□ 0.02
HDAC7-219ENST00000470668 EPS15L1Q9UBC2 864 aa15.16■□□□□ 0.02
HDAC7-219ENST00000470668 PAIP2BQ9ULR5 123 aaKnown RBP15.16■□□□□ 0.02
HDAC7-219ENST00000470668 ATP6V1B1P15313 513 aa15.15■□□□□ 0.02
HDAC7-219ENST00000470668 VHLP40337 213 aa15.15■□□□□ 0.02
HDAC7-219ENST00000470668 PCGF5Q86SE9 256 aa15.15■□□□□ 0.02
HDAC7-219ENST00000470668 ANKMY2Q8IV38 441 aa15.15■□□□□ 0.02
HDAC7-219ENST00000470668 PASD1Q8IV76 773 aa15.15■□□□□ 0.02
HDAC7-219ENST00000470668 SPICE1Q8N0Z3 855 aa15.15■□□□□ 0.02
HDAC7-219ENST00000470668 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.15■□□□□ 0.02
HDAC7-219ENST00000470668 PPM1NQ8N819 430 aa15.15■□□□□ 0.02
HDAC7-219ENST00000470668 ZMAT2Q96NC0 199 aaKnown RBP15.15■□□□□ 0.02
HDAC7-219ENST00000470668 B2RBV5 119 aa15.15■□□□□ 0.02
HDAC7-219ENST00000470668 CPP00450 1065 aa15.15■□□□□ 0.02
HDAC7-219ENST00000470668 ART3Q13508 389 aa15.15■□□□□ 0.02
HDAC7-219ENST00000470668 THOC5Q13769 683 aaKnown RBP15.15■□□□□ 0.02
HDAC7-219ENST00000470668 KLHDC7AQ5VTJ3 777 aa15.15■□□□□ 0.02
HDAC7-219ENST00000470668 ATG16L1Q676U5 607 aa15.15■□□□□ 0.02
HDAC7-219ENST00000470668 TTI2Q6NXR4 508 aa15.15■□□□□ 0.02
HDAC7-219ENST00000470668 ANO5Q75V66 913 aa15.15■□□□□ 0.02
HDAC7-219ENST00000470668 C3orf20Q8ND61 904 aa15.15■□□□□ 0.02
HDAC7-219ENST00000470668 CCT6BQ92526 530 aa15.15■□□□□ 0.02
HDAC7-219ENST00000470668 MTBPQ96DY7 904 aa15.15■□□□□ 0.02
HDAC7-219ENST00000470668 SNF8Q96H20 258 aa15.15■□□□□ 0.02
HDAC7-219ENST00000470668 STK10O94804 968 aaKnown RBP15.15■□□□□ 0.02
HDAC7-219ENST00000470668 GAP43P17677 238 aa15.15■□□□□ 0.02
HDAC7-219ENST00000470668 RFX5P48382 616 aaPredicted RBP15.15■□□□□ 0.02
HDAC7-219ENST00000470668 LIG4P49917 911 aa15.15■□□□□ 0.02
HDAC7-219ENST00000470668 TRIP10Q15642 601 aa15.15■□□□□ 0.02
HDAC7-219ENST00000470668 AOC3Q16853 763 aa15.15■□□□□ 0.02
HDAC7-219ENST00000470668 SLFN13Q68D06 897 aa15.15■□□□□ 0.02
HDAC7-219ENST00000470668 ELOA2Q8IYF1 753 aaPredicted RBP15.15■□□□□ 0.02
HDAC7-219ENST00000470668 EPB41L4AQ9HCS5 686 aaPredicted RBP15.15■□□□□ 0.02
HDAC7-219ENST00000470668 CHMP2BQ9UQN3 213 aa15.15■□□□□ 0.02
HDAC7-219ENST00000470668 APOBEC2Q9Y235 224 aaKnown RBP15.15■□□□□ 0.02
HDAC7-219ENST00000470668 TRAPPC3O43617 180 aa15.14■□□□□ 0.02
HDAC7-219ENST00000470668 STAT3P40763 770 aa15.14■□□□□ 0.02
HDAC7-219ENST00000470668 FAM196AQ6ZSG2 479 aa15.14■□□□□ 0.02
HDAC7-219ENST00000470668 TMEM139Q8IV31 216 aa15.14■□□□□ 0.02
HDAC7-219ENST00000470668 RBM17Q96I25 401 aaKnown RBP15.14■□□□□ 0.02
HDAC7-219ENST00000470668 RBM15Q96T37 977 aaKnown RBP eCLIP15.14■□□□□ 0.026e-8■□□□□ 9.1
HDAC7-219ENST00000470668 SEMA4AQ9H3S1 761 aa15.14■□□□□ 0.02
HDAC7-219ENST00000470668 ABCF3Q9NUQ8 709 aa15.14■□□□□ 0.02
HDAC7-219ENST00000470668 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.14■□□□□ 0.02
HDAC7-219ENST00000470668 COL3A1P02461 1466 aaPredicted RBP15.14■□□□□ 0.01
HDAC7-219ENST00000470668 A0A1W2PQJ5 194 aa15.14■□□□□ 0.01
HDAC7-219ENST00000470668 SARSP49591 514 aaKnown RBP15.14■□□□□ 0.01
HDAC7-219ENST00000470668 SLC12A2P55011 1212 aa15.14■□□□□ 0.01
HDAC7-219ENST00000470668 IFI35P80217 286 aaPredicted RBP15.14■□□□□ 0.01
HDAC7-219ENST00000470668 C16orf87Q6PH81 154 aa15.14■□□□□ 0.01
HDAC7-219ENST00000470668 TRMT10CQ7L0Y3 403 aaKnown RBP15.14■□□□□ 0.01
HDAC7-219ENST00000470668 CELF1Q92879 486 aaKnown RBP15.14■□□□□ 0.01
HDAC7-219ENST00000470668 C11orf70Q9BRQ4 267 aa15.14■□□□□ 0.01
HDAC7-219ENST00000470668 ALG6Q9Y672 507 aa15.14■□□□□ 0.01
HDAC7-219ENST00000470668 A0A087X0B3 334 aa15.14■□□□□ 0.01
HDAC7-219ENST00000470668 ARHGAP10A1A4S6 786 aa15.14■□□□□ 0.01
HDAC7-219ENST00000470668 RCCD1A6NED2 376 aa15.14■□□□□ 0.01
HDAC7-219ENST00000470668 LPXNO60711 386 aa15.14■□□□□ 0.01
HDAC7-219ENST00000470668 RCAN1P53805 252 aa15.14■□□□□ 0.01
HDAC7-219ENST00000470668 ITIH4Q14624 930 aa15.14■□□□□ 0.01
HDAC7-219ENST00000470668 TMED8Q6PL24 325 aaPredicted RBP15.14■□□□□ 0.01
HDAC7-219ENST00000470668 AFAP1L2Q8N4X5 818 aa15.14■□□□□ 0.01
HDAC7-219ENST00000470668 PARD3BQ8TEW8 1205 aa15.14■□□□□ 0.01
HDAC7-219ENST00000470668 CDKL2Q92772 493 aa15.14■□□□□ 0.01
HDAC7-219ENST00000470668 DTNBP1Q96EV8 351 aa15.14■□□□□ 0.01
HDAC7-219ENST00000470668 PHF2O75151 1096 aa15.14■□□□□ 0.01
HDAC7-219ENST00000470668 KRT37O76014 449 aa15.14■□□□□ 0.01
HDAC7-219ENST00000470668 GSTA1P08263 222 aa15.14■□□□□ 0.01
HDAC7-219ENST00000470668 ALDH18A1P54886 795 aaKnown RBP15.14■□□□□ 0.01
HDAC7-219ENST00000470668 GJB7Q6PEY0 223 aa15.14■□□□□ 0.01
HDAC7-219ENST00000470668 DARS2Q6PI48 645 aaKnown RBP15.14■□□□□ 0.01
HDAC7-219ENST00000470668 ISCA1Q9BUE6 129 aa15.14■□□□□ 0.01
HDAC7-219ENST00000470668 SH3GLB2Q9NR46 395 aa15.14■□□□□ 0.01
HDAC7-219ENST00000470668 SEPT10Q9P0V9 454 aa15.14■□□□□ 0.01
HDAC7-219ENST00000470668 GINS2Q9Y248 185 aa15.14■□□□□ 0.01
HDAC7-219ENST00000470668 WDR64B1ANS9 1081 aa15.13■□□□□ 0.01
HDAC7-219ENST00000470668 H3BRJ5 948 aa15.13■□□□□ 0.01
HDAC7-219ENST00000470668 SOX5P35711 763 aa15.13■□□□□ 0.01
HDAC7-219ENST00000470668 BPIFB4P59827 614 aa15.13■□□□□ 0.01
HDAC7-219ENST00000470668 AGXT2Q9BYV1 514 aa15.13■□□□□ 0.01
HDAC7-219ENST00000470668 MRPL47Q9HD33 250 aaKnown RBP15.13■□□□□ 0.01
HDAC7-219ENST00000470668 NAGPAQ9UK23 515 aa15.13■□□□□ 0.01
HDAC7-219ENST00000470668 PCDHA6Q9UN73 950 aa15.13■□□□□ 0.01
HDAC7-219ENST00000470668 PCDHA8Q9Y5H6 950 aa15.13■□□□□ 0.01
HDAC7-219ENST00000470668 MCF2LO15068 1137 aa15.13■□□□□ 0.01
HDAC7-219ENST00000470668 PIK3CAP42336 1068 aa15.13■□□□□ 0.01
HDAC7-219ENST00000470668 ATXN3P54252 364 aaPredicted RBP15.13■□□□□ 0.01
HDAC7-219ENST00000470668 SNAP25P60880 206 aa15.13■□□□□ 0.01
HDAC7-219ENST00000470668 KCNJ2P63252 427 aa15.13■□□□□ 0.01
HDAC7-219ENST00000470668 STAT4Q14765 748 aa15.13■□□□□ 0.01
HDAC7-219ENST00000470668 ACCSLQ4AC99 568 aa15.13■□□□□ 0.01
HDAC7-219ENST00000470668 BRDTQ58F21 947 aaPredicted RBP15.13■□□□□ 0.01
HDAC7-219ENST00000470668 SYCP2LQ5T4T6 812 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms