RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 FRS2Q8WU20 508 aa8.14□□□□□ -1.11
PTP4A1-202ENST00000470661 BRI3BPQ8WY22 251 aa8.14□□□□□ -1.11
PTP4A1-202ENST00000470661 NSUN4Q96CB9 384 aaKnown RBP8.14□□□□□ -1.11
PTP4A1-202ENST00000470661 WRNIP1Q96S55 665 aa8.14□□□□□ -1.11
PTP4A1-202ENST00000470661 TMOD2Q9NZR1 351 aa8.14□□□□□ -1.11
PTP4A1-202ENST00000470661 NOP58Q9Y2X3 529 aaKnown RBP8.14□□□□□ -1.11
PTP4A1-202ENST00000470661 RWDD3Q9Y3V2 267 aa8.14□□□□□ -1.11
PTP4A1-202ENST00000470661 MYH2Q9UKX2 1941 aa8.13□□□□□ -1.11
PTP4A1-202ENST00000470661 MYO5AQ9Y4I1 1855 aaKnown RBP8.13□□□□□ -1.11
PTP4A1-202ENST00000470661 A0A1W2PQJ5 194 aa8.13□□□□□ -1.11
PTP4A1-202ENST00000470661 A0A1W2PQU0 124 aa8.13□□□□□ -1.11
PTP4A1-202ENST00000470661 AGRPO00253 132 aa8.13□□□□□ -1.11
PTP4A1-202ENST00000470661 KCNJ6P48051 423 aa8.13□□□□□ -1.11
PTP4A1-202ENST00000470661 RHBDL3P58872 404 aa8.13□□□□□ -1.11
PTP4A1-202ENST00000470661 PPP2R2AP63151 447 aa8.13□□□□□ -1.11
PTP4A1-202ENST00000470661 RAB3GAP1Q15042 981 aa8.13□□□□□ -1.11
PTP4A1-202ENST00000470661 TSHZ3Q63HK5 1081 aa8.13□□□□□ -1.11
PTP4A1-202ENST00000470661 ANKRD13AQ8IZ07 590 aa8.13□□□□□ -1.11
PTP4A1-202ENST00000470661 MIGA1Q8NAN2 632 aa8.13□□□□□ -1.11
PTP4A1-202ENST00000470661 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.13□□□□□ -1.11
PTP4A1-202ENST00000470661 NPLOC4Q8TAT6 608 aa8.13□□□□□ -1.11
PTP4A1-202ENST00000470661 FAM151AQ8WW52 585 aa8.13□□□□□ -1.11
PTP4A1-202ENST00000470661 MRIQ9BWK5 157 aa8.13□□□□□ -1.11
PTP4A1-202ENST00000470661 PDLIM7Q9NR12 457 aa8.13□□□□□ -1.11
PTP4A1-202ENST00000470661 AATFQ9NY61 560 aaKnown RBP eCLIP8.13□□□□□ -1.11
PTP4A1-202ENST00000470661 GULP1Q9UBP9 304 aa8.13□□□□□ -1.11
PTP4A1-202ENST00000470661 FBLN5Q9UBX5 448 aa8.13□□□□□ -1.11
PTP4A1-202ENST00000470661 SAP30BPQ9UHR5 308 aaKnown RBP8.13□□□□□ -1.11
PTP4A1-202ENST00000470661 PPP2R3BQ9Y5P8 575 aa8.13□□□□□ -1.11
PTP4A1-202ENST00000470661 THSD7BQ9C0I4 1608 aa8.13□□□□□ -1.11
PTP4A1-202ENST00000470661 CENPFP49454 3210 aa8.13□□□□□ -1.11
PTP4A1-202ENST00000470661 MROH7-TTC4A0A0A0MT08 1334 aa8.12□□□□□ -1.11
PTP4A1-202ENST00000470661 SALL1Q9NSC2 1324 aa8.12□□□□□ -1.11
PTP4A1-202ENST00000470661 AKAP11Q9UKA4 1901 aa8.12□□□□□ -1.11
PTP4A1-202ENST00000470661 GPR75-ASB3A0A0A6YYF3 556 aa8.12□□□□□ -1.11
PTP4A1-202ENST00000470661 PPP1R11O60927 126 aaPredicted RBP8.12□□□□□ -1.11
PTP4A1-202ENST00000470661 MPOP05164 745 aa8.12□□□□□ -1.11
PTP4A1-202ENST00000470661 JAG1P78504 1218 aa8.12□□□□□ -1.11
PTP4A1-202ENST00000470661 TNFAIP1Q13829 316 aa8.12□□□□□ -1.11
PTP4A1-202ENST00000470661 CCDC158Q5M9N0 1113 aa8.12□□□□□ -1.11
PTP4A1-202ENST00000470661 FAM83AQ86UY5 434 aa8.12□□□□□ -1.11
PTP4A1-202ENST00000470661 MAPKAPK5Q8IW41 473 aa8.12□□□□□ -1.11
PTP4A1-202ENST00000470661 FAM43AQ8N2R8 423 aa8.12□□□□□ -1.11
PTP4A1-202ENST00000470661 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.12□□□□□ -1.11
PTP4A1-202ENST00000470661 SGPP1Q9BX95 441 aa8.12□□□□□ -1.11
PTP4A1-202ENST00000470661 KLHL14Q9P2G3 628 aa8.12□□□□□ -1.11
PTP4A1-202ENST00000470661 ECM29Q5VYK3 1845 aa8.12□□□□□ -1.11
PTP4A1-202ENST00000470661 GAKO14976 1311 aa8.11□□□□□ -1.11
PTP4A1-202ENST00000470661 MAST3O60307 1309 aa8.11□□□□□ -1.11
PTP4A1-202ENST00000470661 TRBV23OR9-2A0A075B6M9 112 aa8.11□□□□□ -1.11
PTP4A1-202ENST00000470661 CCL15-CCL14A0A0B4J2E2 113 aa8.11□□□□□ -1.11
PTP4A1-202ENST00000470661 C7orf72A4D263 438 aa8.11□□□□□ -1.11
PTP4A1-202ENST00000470661 SMIM22K7EJ46 135 aa8.11□□□□□ -1.11
PTP4A1-202ENST00000470661 ETV2O00321 342 aaPredicted RBP8.11□□□□□ -1.11
PTP4A1-202ENST00000470661 IDH1O75874 414 aaKnown RBP8.11□□□□□ -1.11
PTP4A1-202ENST00000470661 KRT1P04264 644 aa8.11□□□□□ -1.11
PTP4A1-202ENST00000470661 UQCRFS1P1P0C7P4 283 aa8.11□□□□□ -1.11
PTP4A1-202ENST00000470661 HOXC12P31275 282 aa8.11□□□□□ -1.11
PTP4A1-202ENST00000470661 VIPR1P32241 457 aa8.11□□□□□ -1.11
PTP4A1-202ENST00000470661 GFRA1P56159 465 aa8.11□□□□□ -1.11
PTP4A1-202ENST00000470661 SRSF3P84103 164 aaKnown RBP8.11□□□□□ -1.11
PTP4A1-202ENST00000470661 CRHR2Q13324 411 aa8.11□□□□□ -1.11
PTP4A1-202ENST00000470661 CCL15Q16663 113 aa8.11□□□□□ -1.11
PTP4A1-202ENST00000470661 INF2Q27J81 1249 aa8.11□□□□□ -1.11
PTP4A1-202ENST00000470661 SPTY2D1Q68D10 685 aaPredicted RBP8.11□□□□□ -1.11
PTP4A1-202ENST00000470661 NAA16Q6N069 864 aaPredicted RBP8.11□□□□□ -1.11
PTP4A1-202ENST00000470661 RPTNQ6XPR3 784 aa8.11□□□□□ -1.11
PTP4A1-202ENST00000470661 TEX11Q8IYF3 940 aa8.11□□□□□ -1.11
PTP4A1-202ENST00000470661 MAGEB6Q8N7X4 407 aa8.11□□□□□ -1.11
PTP4A1-202ENST00000470661 TMEM145Q8NBT3 493 aa8.11□□□□□ -1.11
PTP4A1-202ENST00000470661 TGFBRAP1Q8WUH2 860 aa8.11□□□□□ -1.11
PTP4A1-202ENST00000470661 KCNN1Q92952 543 aa8.11□□□□□ -1.11
PTP4A1-202ENST00000470661 PPP1R16BQ96T49 567 aa8.11□□□□□ -1.11
PTP4A1-202ENST00000470661 DNAJC2Q99543 621 aaKnown RBP8.11□□□□□ -1.11
PTP4A1-202ENST00000470661 ZNF341Q9BYN7 854 aa8.11□□□□□ -1.11
PTP4A1-202ENST00000470661 GPR108Q9NPR9 543 aa8.11□□□□□ -1.11
PTP4A1-202ENST00000470661 TMEFF2Q9UIK5 374 aaPredicted RBP8.11□□□□□ -1.11
PTP4A1-202ENST00000470661 DDX19BQ9UMR2 479 aa8.11□□□□□ -1.11
PTP4A1-202ENST00000470661 MSRB2Q9Y3D2 182 aa8.11□□□□□ -1.11
PTP4A1-202ENST00000470661 OTOFQ9HC10 1997 aa8.1□□□□□ -1.11
PTP4A1-202ENST00000470661 ARAP2Q8WZ64 1704 aa8.1□□□□□ -1.11
PTP4A1-202ENST00000470661 BTBD19C9JJ37 291 aa8.1□□□□□ -1.11
PTP4A1-202ENST00000470661 GOLIM4O00461 696 aa8.1□□□□□ -1.11
PTP4A1-202ENST00000470661 CA12O43570 354 aa8.1□□□□□ -1.11
PTP4A1-202ENST00000470661 PEX10O60683 326 aa8.1□□□□□ -1.11
PTP4A1-202ENST00000470661 TMEM253P0C7T8 217 aa8.1□□□□□ -1.11
PTP4A1-202ENST00000470661 C1QTNF9P0C862 333 aa8.1□□□□□ -1.11
PTP4A1-202ENST00000470661 SOX10P56693 466 aa8.1□□□□□ -1.11
PTP4A1-202ENST00000470661 CORO7P57737 925 aa8.1□□□□□ -1.11
PTP4A1-202ENST00000470661 YBX1P67809 324 aaKnown RBP8.1□□□□□ -1.11
PTP4A1-202ENST00000470661 SF3A1Q15459 793 aaKnown RBP8.1□□□□□ -1.11
PTP4A1-202ENST00000470661 FKBP1CQ5VVH2 108 aa8.1□□□□□ -1.11
PTP4A1-202ENST00000470661 TMC6Q7Z403 805 aa8.1□□□□□ -1.11
PTP4A1-202ENST00000470661 CCDC103Q8IW40 242 aa8.1□□□□□ -1.11
PTP4A1-202ENST00000470661 KREMEN2Q8NCW0 462 aa8.1□□□□□ -1.11
PTP4A1-202ENST00000470661 ST13P5Q8NFI4 369 aaPredicted RBP8.1□□□□□ -1.11
PTP4A1-202ENST00000470661 CD99L2Q8TCZ2 262 aa8.1□□□□□ -1.11
PTP4A1-202ENST00000470661 OTUD7AQ8TE49 926 aaPredicted RBP8.1□□□□□ -1.11
PTP4A1-202ENST00000470661 ARHGAP39Q9C0H5 1083 aa8.1□□□□□ -1.11
PTP4A1-202ENST00000470661 BOLA2Q9H3K6 86 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms