RNA–Protein interactions for RNA: ENST00000470396.1

PSMD4-210, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 1 (best)

Gene PSMD4, Length 338 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-210ENST00000470396 TWF2Q6IBS0 349 aaKnown RBP7.55□□□□□ -1.2
PSMD4-210ENST00000470396 PPP4R3CPQ6ZMV5 832 aa7.55□□□□□ -1.2
PSMD4-210ENST00000470396 GPBP1Q86WP2 473 aa7.55□□□□□ -1.2
PSMD4-210ENST00000470396 KCTD17Q8N5Z5 321 aa7.55□□□□□ -1.2
PSMD4-210ENST00000470396 SMG8Q8ND04 991 aaKnown RBP7.55□□□□□ -1.2
PSMD4-210ENST00000470396 GDPD5Q8WTR4 605 aa7.55□□□□□ -1.2
PSMD4-210ENST00000470396 LEO1Q8WVC0 666 aaPredicted RBP7.55□□□□□ -1.2
PSMD4-210ENST00000470396 ARNTL2Q8WYA1 636 aa7.55□□□□□ -1.2
PSMD4-210ENST00000470396 LARP4BQ92615 738 aaKnown RBP7.55□□□□□ -1.2
PSMD4-210ENST00000470396 KIFAP3Q92845 792 aa7.55□□□□□ -1.2
PSMD4-210ENST00000470396 DNAJC19Q96DA6 116 aa7.55□□□□□ -1.2
PSMD4-210ENST00000470396 CALML4Q96GE6 196 aa7.55□□□□□ -1.2
PSMD4-210ENST00000470396 CDK5RAP3Q96JB5 506 aa7.55□□□□□ -1.2
PSMD4-210ENST00000470396 CASD1Q96PB1 797 aa7.55□□□□□ -1.2
PSMD4-210ENST00000470396 PANK2Q9BZ23 570 aa7.55□□□□□ -1.2
PSMD4-210ENST00000470396 INO80BQ9C086 356 aaPredicted RBP7.55□□□□□ -1.2
PSMD4-210ENST00000470396 RNF39Q9H2S5 420 aa7.55□□□□□ -1.2
PSMD4-210ENST00000470396 ELAC1Q9H777 363 aaKnown RBP7.55□□□□□ -1.2
PSMD4-210ENST00000470396 FAM105AQ9NUU6 356 aa7.55□□□□□ -1.2
PSMD4-210ENST00000470396 TMEM161AQ9NX61 479 aa7.55□□□□□ -1.2
PSMD4-210ENST00000470396 ARHGAP28Q9P2N2 729 aa7.55□□□□□ -1.2
PSMD4-210ENST00000470396 MTUS1Q9ULD2 1270 aa7.55□□□□□ -1.2
PSMD4-210ENST00000470396 TRIP11Q15643 1979 aa7.55□□□□□ -1.2
PSMD4-210ENST00000470396 CNTNAP2Q9UHC6 1331 aa7.54□□□□□ -1.2
PSMD4-210ENST00000470396 PLXNA4Q9HCM2 1894 aa7.54□□□□□ -1.2
PSMD4-210ENST00000470396 A0A1B0GUA9 196 aa7.54□□□□□ -1.2
PSMD4-210ENST00000470396 ABLIM1O14639 778 aa7.54□□□□□ -1.2
PSMD4-210ENST00000470396 CUTAO60888 179 aa7.54□□□□□ -1.2
PSMD4-210ENST00000470396 ZNF623O75123 536 aa7.54□□□□□ -1.2
PSMD4-210ENST00000470396 PLS3P13797 630 aa7.54□□□□□ -1.2
PSMD4-210ENST00000470396 ZSCAN20P17040 1043 aaPredicted RBP7.54□□□□□ -1.2
PSMD4-210ENST00000470396 COL9A1P20849 921 aa7.54□□□□□ -1.2
PSMD4-210ENST00000470396 PEX3P56589 373 aa7.54□□□□□ -1.2
PSMD4-210ENST00000470396 CAMK1Q14012 370 aa7.54□□□□□ -1.2
PSMD4-210ENST00000470396 BTG3Q14201 252 aaPredicted RBP7.54□□□□□ -1.2
PSMD4-210ENST00000470396 EPC2Q52LR7 807 aa7.54□□□□□ -1.2
PSMD4-210ENST00000470396 EEF1DP3Q658K8 133 aa7.54□□□□□ -1.2
PSMD4-210ENST00000470396 AGMOQ6ZNB7 445 aa7.54□□□□□ -1.2
PSMD4-210ENST00000470396 FAM43BQ6ZT52 329 aaPredicted RBP7.54□□□□□ -1.2
PSMD4-210ENST00000470396 MRPL10Q7Z7H8 261 aaKnown RBP7.54□□□□□ -1.2
PSMD4-210ENST00000470396 CMTR2Q8IYT2 770 aaKnown RBP7.54□□□□□ -1.2
PSMD4-210ENST00000470396 PDILTQ8N807 584 aa7.54□□□□□ -1.2
PSMD4-210ENST00000470396 TMEM161BQ8NDZ6 487 aa7.54□□□□□ -1.2
PSMD4-210ENST00000470396 HELQQ8TDG4 1101 aa7.54□□□□□ -1.2
PSMD4-210ENST00000470396 KCNG4Q8TDN1 519 aa7.54□□□□□ -1.2
PSMD4-210ENST00000470396 SPIRE2Q8WWL2 714 aa7.54□□□□□ -1.2
PSMD4-210ENST00000470396 DRC1Q96MC2 740 aa7.54□□□□□ -1.2
PSMD4-210ENST00000470396 TGS1Q96RS0 853 aaKnown RBP7.54□□□□□ -1.2
PSMD4-210ENST00000470396 NTPCRQ9BSD7 190 aaKnown RBP7.54□□□□□ -1.2
PSMD4-210ENST00000470396 CXCL16Q9H2A7 254 aa7.54□□□□□ -1.2
PSMD4-210ENST00000470396 NXF3Q9H4D5 531 aaKnown RBP7.54□□□□□ -1.2
PSMD4-210ENST00000470396 PDZD7Q9H5P4 517 aa7.54□□□□□ -1.2
PSMD4-210ENST00000470396 CWH43Q9H720 699 aa7.54□□□□□ -1.2
PSMD4-210ENST00000470396 GDPD2Q9HCC8 539 aa7.54□□□□□ -1.2
PSMD4-210ENST00000470396 DACT1Q9NYF0 836 aa7.54□□□□□ -1.2
PSMD4-210ENST00000470396 KCND2Q9NZV8 630 aa7.54□□□□□ -1.2
PSMD4-210ENST00000470396 STK17AQ9UEE5 414 aa7.54□□□□□ -1.2
PSMD4-210ENST00000470396 HES2Q9Y543 173 aa7.54□□□□□ -1.2
PSMD4-210ENST00000470396 PCDHB7Q9Y5E2 793 aa7.54□□□□□ -1.2
PSMD4-210ENST00000470396 PCDHB2Q9Y5E7 798 aa7.54□□□□□ -1.2
PSMD4-210ENST00000470396 TBKBP1A7MCY6 615 aa7.53□□□□□ -1.2
PSMD4-210ENST00000470396 C5orf67F2Z3F1 127 aa7.53□□□□□ -1.2
PSMD4-210ENST00000470396 ACKR2O00590 384 aa7.53□□□□□ -1.2
PSMD4-210ENST00000470396 SLC16A4O15374 487 aa7.53□□□□□ -1.2
PSMD4-210ENST00000470396 MEFVO15553 781 aaPredicted RBP7.53□□□□□ -1.2
PSMD4-210ENST00000470396 OFD1O75665 1012 aa7.53□□□□□ -1.2
PSMD4-210ENST00000470396 ERLIN2O94905 339 aa7.53□□□□□ -1.2
PSMD4-210ENST00000470396 EOMESO95936 686 aa7.53□□□□□ -1.2
PSMD4-210ENST00000470396 PRKCBP05771 671 aa7.53□□□□□ -1.2
PSMD4-210ENST00000470396 STAG3L1P0CL83 205 aa7.53□□□□□ -1.2
PSMD4-210ENST00000470396 MAPTP10636 758 aaKnown RBP7.53□□□□□ -1.2
PSMD4-210ENST00000470396 DNAJB1P25685 340 aa7.53□□□□□ -1.2
PSMD4-210ENST00000470396 AXLP30530 894 aa7.53□□□□□ -1.2
PSMD4-210ENST00000470396 BMPR1AP36894 532 aa7.53□□□□□ -1.2
PSMD4-210ENST00000470396 PBX3P40426 434 aa7.53□□□□□ -1.2
PSMD4-210ENST00000470396 ME1P48163 572 aa7.53□□□□□ -1.2
PSMD4-210ENST00000470396 NCKAP1LP55160 1127 aa7.53□□□□□ -1.2
PSMD4-210ENST00000470396 DMP1Q13316 513 aaPredicted RBP7.53□□□□□ -1.2
PSMD4-210ENST00000470396 PPP2R5AQ15172 486 aa7.53□□□□□ -1.2
PSMD4-210ENST00000470396 PCBP1Q15365 356 aaKnown RBP eCLIP7.53□□□□□ -1.2
PSMD4-210ENST00000470396 RRAGBQ5VZM2 374 aa7.53□□□□□ -1.2
PSMD4-210ENST00000470396 NOTUMQ6P988 496 aa7.53□□□□□ -1.2
PSMD4-210ENST00000470396 TMEM192Q8IY95 271 aa7.53□□□□□ -1.2
PSMD4-210ENST00000470396 FIBCD1Q8N539 461 aa7.53□□□□□ -1.2
PSMD4-210ENST00000470396 RNF169Q8NCN4 708 aa7.53□□□□□ -1.2
PSMD4-210ENST00000470396 GSTCDQ8NEC7 633 aa7.53□□□□□ -1.2
PSMD4-210ENST00000470396 DEPTORQ8TB45 409 aa7.53□□□□□ -1.2
PSMD4-210ENST00000470396 DDX12PQ92771 950 aa7.53□□□□□ -1.2
PSMD4-210ENST00000470396 STAMQ92783 540 aa7.53□□□□□ -1.2
PSMD4-210ENST00000470396 KCNN1Q92952 543 aa7.53□□□□□ -1.2
PSMD4-210ENST00000470396 IFT74Q96LB3 600 aa7.53□□□□□ -1.2
PSMD4-210ENST00000470396 PRIMPOLQ96LW4 560 aa7.53□□□□□ -1.2
PSMD4-210ENST00000470396 TIPINQ9BVW5 301 aa7.53□□□□□ -1.2
PSMD4-210ENST00000470396 FGFBP2Q9BYJ0 223 aa7.53□□□□□ -1.2
PSMD4-210ENST00000470396 HAPLN2Q9GZV7 340 aa7.53□□□□□ -1.2
PSMD4-210ENST00000470396 TMEM117Q9H0C3 514 aa7.53□□□□□ -1.2
PSMD4-210ENST00000470396 IKZF4Q9H2S9 585 aa7.53□□□□□ -1.2
PSMD4-210ENST00000470396 C17orf75Q9HAS0 396 aa7.53□□□□□ -1.2
PSMD4-210ENST00000470396 PTPRHQ9HD43 1115 aa7.53□□□□□ -1.2
PSMD4-210ENST00000470396 TYW1Q9NV66 732 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms