RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 XRCC5P13010 732 aaKnown RBP10.23□□□□□ -0.77
NHLRC3-203ENST00000470258 PON1P27169 355 aa10.23□□□□□ -0.77
NHLRC3-203ENST00000470258 FOXN2P32314 431 aa10.23□□□□□ -0.77
NHLRC3-203ENST00000470258 SKIV2L2P42285 1042 aaKnown RBP10.23□□□□□ -0.77
NHLRC3-203ENST00000470258 STRN3Q13033 797 aa10.23□□□□□ -0.77
NHLRC3-203ENST00000470258 PPP2R5EQ16537 467 aa10.23□□□□□ -0.77
NHLRC3-203ENST00000470258 ZCWPW2Q504Y3 356 aa10.23□□□□□ -0.77
NHLRC3-203ENST00000470258 RBM26Q5T8P6 1007 aaKnown RBP10.23□□□□□ -0.77
NHLRC3-203ENST00000470258 RNF43Q68DV7 783 aa10.23□□□□□ -0.77
NHLRC3-203ENST00000470258 PPFIBP2Q8ND30 876 aa10.23□□□□□ -0.77
NHLRC3-203ENST00000470258 KRT35Q92764 455 aa10.23□□□□□ -0.77
NHLRC3-203ENST00000470258 ZNF333Q96JL9 665 aa10.23□□□□□ -0.77
NHLRC3-203ENST00000470258 MKNK2Q9HBH9 465 aa10.23□□□□□ -0.77
NHLRC3-203ENST00000470258 RHBDL2Q9NX52 303 aa10.23□□□□□ -0.77
NHLRC3-203ENST00000470258 PITPNM2Q9BZ72 1349 aa10.23□□□□□ -0.77
NHLRC3-203ENST00000470258 PCDH11XQ9BZA7 1347 aa10.23□□□□□ -0.77
NHLRC3-203ENST00000470258 MYH3P11055 1940 aa10.23□□□□□ -0.77
NHLRC3-203ENST00000470258 SLC37A4O43826 429 aa10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 RASA1P20936 1047 aa10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 TMED2Q15363 201 aa10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 SLC35G1Q2M3R5 365 aa10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 PARP6Q2NL67 630 aa10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 PRELID2Q8N945 189 aa10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 RFFLQ8WZ73 363 aa10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 DYNLL2Q96FJ2 89 aa10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 CEP63Q96MT8 703 aa10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 RAB34Q9BZG1 259 aa10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 CARD9Q9H257 536 aa10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 DCLRE1BQ9H816 532 aa10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 EMILIN3Q9NT22 766 aa10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 USP40Q9NVE5 1235 aa10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 E9PMD0 336 aa10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 TAC1P20366 129 aa10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 STAT1P42224 750 aa10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 TNNI2P48788 182 aa10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 RASSF2P50749 326 aa10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 IL9RQ01113 521 aa10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 CDR2Q01850 454 aa10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 MCL1Q07820 350 aa10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 RRP1BQ14684 758 aaKnown RBP10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 ZRSR2Q15696 482 aaKnown RBP10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 CYP4X1Q8N118 509 aa10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 REXO1Q8N1G1 1221 aaKnown RBP10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 STMN2Q93045 179 aa10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 OPTNQ96CV9 577 aa10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 BICD1Q96G01 975 aa10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 PWWP2AQ96N64 755 aa10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 THAP2Q9H0W7 228 aa10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 TCRBV7S2A1N4TA0A589 114 aa10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 KLRF2D3W0D1 207 aa10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 ATP5HO75947 161 aa10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 USP17L8P0C7I0 530 aa10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 MARK3P27448 753 aa10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 CHRNA3P32297 505 aa10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 MESDQ14696 234 aa10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 TAF1BQ53T94 588 aaPredicted RBP10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 SEL1L2Q5TEA6 688 aa10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 PRUNE1Q86TP1 453 aa10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 GPBP1Q86WP2 473 aa10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 APLFQ8IW19 511 aaPredicted RBP10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 CCDC65Q8IXS2 484 aa10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 SCYL3Q8IZE3 742 aa10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 MAGEB18Q96M61 343 aa10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 BRIP1Q9BX63 1249 aa10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 PHTF1Q9UMS5 762 aa10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 PCDHB13Q9Y5F0 798 aa10.22□□□□□ -0.77
NHLRC3-203ENST00000470258 KAT6BQ8WYB5 2073 aa10.21□□□□□ -0.77
NHLRC3-203ENST00000470258 SLIT2O94813 1529 aa10.21□□□□□ -0.77
NHLRC3-203ENST00000470258 PASKQ96RG2 1323 aa10.21□□□□□ -0.77
NHLRC3-203ENST00000470258 RASA4BC9J798 803 aa10.21□□□□□ -0.77
NHLRC3-203ENST00000470258 PODXLO00592 558 aa10.21□□□□□ -0.77
NHLRC3-203ENST00000470258 RASA4O43374 803 aa10.21□□□□□ -0.77
NHLRC3-203ENST00000470258 PTGIRP43119 386 aa10.21□□□□□ -0.77
NHLRC3-203ENST00000470258 ECM1Q16610 540 aa10.21□□□□□ -0.77
NHLRC3-203ENST00000470258 ARHGAP44Q17R89 818 aa10.21□□□□□ -0.77
NHLRC3-203ENST00000470258 MFSD5Q6N075 450 aa10.21□□□□□ -0.77
NHLRC3-203ENST00000470258 DSTYKQ6XUX3 929 aa10.21□□□□□ -0.77
NHLRC3-203ENST00000470258 EPM2AIP1Q7L775 607 aaPredicted RBP10.21□□□□□ -0.77
NHLRC3-203ENST00000470258 HS2ST1Q7LGA3 356 aa10.21□□□□□ -0.77
NHLRC3-203ENST00000470258 LNX1Q8TBB1 728 aaPredicted RBP10.21□□□□□ -0.77
NHLRC3-203ENST00000470258 TRAPPC9Q96Q05 1148 aa10.21□□□□□ -0.77
NHLRC3-203ENST00000470258 PREBQ9HCU5 417 aa10.21□□□□□ -0.77
NHLRC3-203ENST00000470258 GALNT8Q9NY28 637 aa10.21□□□□□ -0.77
NHLRC3-203ENST00000470258 TAS2R14Q9NYV8 317 aa10.21□□□□□ -0.77
NHLRC3-203ENST00000470258 SEC63Q9UGP8 760 aaKnown RBP10.21□□□□□ -0.77
NHLRC3-203ENST00000470258 MAD2L2Q9UI95 211 aa10.21□□□□□ -0.77
NHLRC3-203ENST00000470258 DCTN4Q9UJW0 460 aa10.21□□□□□ -0.77
NHLRC3-203ENST00000470258 TTC36A6NLP5 189 aa10.21□□□□□ -0.78
NHLRC3-203ENST00000470258 TJP3O95049 919 aa10.21□□□□□ -0.78
NHLRC3-203ENST00000470258 GSTA2P09210 222 aa10.21□□□□□ -0.78
NHLRC3-203ENST00000470258 TSPY3P0CV98 308 aa10.21□□□□□ -0.78
NHLRC3-203ENST00000470258 TSPY8P0CW00 308 aa10.21□□□□□ -0.78
NHLRC3-203ENST00000470258 TPP2P29144 1249 aaPredicted RBP10.21□□□□□ -0.78
NHLRC3-203ENST00000470258 GNA11P29992 359 aa10.21□□□□□ -0.78
NHLRC3-203ENST00000470258 CHKAP35790 457 aa10.21□□□□□ -0.78
NHLRC3-203ENST00000470258 DEUP1Q05D60 604 aa10.21□□□□□ -0.78
NHLRC3-203ENST00000470258 MKRN3Q13064 507 aaKnown RBP10.21□□□□□ -0.78
NHLRC3-203ENST00000470258 KPNB1Q14974 876 aaKnown RBP10.21□□□□□ -0.78
NHLRC3-203ENST00000470258 CERKLQ49MI3 558 aaPredicted RBP10.21□□□□□ -0.78
NHLRC3-203ENST00000470258 CAPN12Q6ZSI9 719 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms