RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 CCDC154A6NI56 674 aa5.38□□□□□ -1.55
VPS8-220ENST00000469713 PRAMEF4O60810 478 aa5.38□□□□□ -1.55
VPS8-220ENST00000469713 LTA4HP09960 611 aaKnown RBP5.38□□□□□ -1.55
VPS8-220ENST00000469713 GSPT1P15170 499 aaKnown RBP5.38□□□□□ -1.55
VPS8-220ENST00000469713 AKAP5P24588 427 aa5.38□□□□□ -1.55
VPS8-220ENST00000469713 CTSSP25774 331 aa5.38□□□□□ -1.55
VPS8-220ENST00000469713 FXR1P51114 621 aaKnown RBP eCLIP5.38□□□□□ -1.55
VPS8-220ENST00000469713 SLURP1P55000 103 aa5.38□□□□□ -1.55
VPS8-220ENST00000469713 SESN2P58004 480 aaPredicted RBP5.38□□□□□ -1.55
VPS8-220ENST00000469713 UBE3CQ15386 1083 aa5.38□□□□□ -1.55
VPS8-220ENST00000469713 ZNF827Q17R98 1081 aa5.38□□□□□ -1.55
VPS8-220ENST00000469713 IFIT1BQ5T764 474 aaKnown RBP5.38□□□□□ -1.55
VPS8-220ENST00000469713 AGBL4Q5VU57 503 aa5.38□□□□□ -1.55
VPS8-220ENST00000469713 CIAPIN1Q6FI81 312 aa5.38□□□□□ -1.55
VPS8-220ENST00000469713 ABHD15Q6UXT9 468 aa5.38□□□□□ -1.55
VPS8-220ENST00000469713 TMEM151BQ8IW70 566 aa5.38□□□□□ -1.55
VPS8-220ENST00000469713 MSL3Q8N5Y2 521 aaKnown RBP5.38□□□□□ -1.55
VPS8-220ENST00000469713 OR2I1PQ8NGU4 316 aa5.38□□□□□ -1.55
VPS8-220ENST00000469713 LCORQ96JN0 433 aaPredicted RBP5.38□□□□□ -1.55
VPS8-220ENST00000469713 AIFM3Q96NN9 605 aa5.38□□□□□ -1.55
VPS8-220ENST00000469713 UIMC1Q96RL1 719 aa5.38□□□□□ -1.55
VPS8-220ENST00000469713 KRTAP4-2Q9BYR5 136 aa5.38□□□□□ -1.55
VPS8-220ENST00000469713 GTPBP4Q9BZE4 634 aaKnown RBP5.38□□□□□ -1.55
VPS8-220ENST00000469713 INTUQ9ULD6 942 aa5.38□□□□□ -1.55
VPS8-220ENST00000469713 LIMCH1Q9UPQ0 1083 aa5.38□□□□□ -1.55
VPS8-220ENST00000469713 CTDP1Q9Y5B0 961 aaPredicted RBP5.38□□□□□ -1.55
VPS8-220ENST00000469713 RBM8AQ9Y5S9 174 aaKnown RBP5.38□□□□□ -1.55
VPS8-220ENST00000469713 C9orf118A6NHY6 69 aa5.37□□□□□ -1.55
VPS8-220ENST00000469713 DAPK3O43293 454 aa5.37□□□□□ -1.55
VPS8-220ENST00000469713 HTRA2O43464 458 aaPredicted RBP5.37□□□□□ -1.55
VPS8-220ENST00000469713 AP1G1O43747 822 aa5.37□□□□□ -1.55
VPS8-220ENST00000469713 AKR1B10O60218 316 aa5.37□□□□□ -1.55
VPS8-220ENST00000469713 POU2F2P09086 479 aa5.37□□□□□ -1.55
VPS8-220ENST00000469713 EDNRBP24530 442 aa5.37□□□□□ -1.55
VPS8-220ENST00000469713 MEF2AQ02078 507 aaPredicted RBP5.37□□□□□ -1.55
VPS8-220ENST00000469713 ZNF267Q14586 743 aaPredicted RBP5.37□□□□□ -1.55
VPS8-220ENST00000469713 NOMO1Q15155 1222 aa5.37□□□□□ -1.55
VPS8-220ENST00000469713 TBR1Q16650 682 aa5.37□□□□□ -1.55
VPS8-220ENST00000469713 C3orf36Q3SXR2 165 aa5.37□□□□□ -1.55
VPS8-220ENST00000469713 TCERG1LQ5VWI1 586 aa5.37□□□□□ -1.55
VPS8-220ENST00000469713 LILRA6Q6PI73 481 aa5.37□□□□□ -1.55
VPS8-220ENST00000469713 RALYLQ86SE5 291 aaKnown RBP5.37□□□□□ -1.55
VPS8-220ENST00000469713 ZDHHC14Q8IZN3 488 aa5.37□□□□□ -1.55
VPS8-220ENST00000469713 PLA2G15Q8NCC3 412 aa5.37□□□□□ -1.55
VPS8-220ENST00000469713 GPR156Q8NFN8 814 aa5.37□□□□□ -1.55
VPS8-220ENST00000469713 PAWRQ96IZ0 340 aaKnown RBP5.37□□□□□ -1.55
VPS8-220ENST00000469713 OR10A2Q9H208 303 aa5.37□□□□□ -1.55
VPS8-220ENST00000469713 SLC12A5Q9H2X9 1139 aa5.37□□□□□ -1.55
VPS8-220ENST00000469713 NMRK2Q9NPI5 230 aa5.37□□□□□ -1.55
VPS8-220ENST00000469713 RBM12Q9NTZ6 932 aaKnown RBP5.37□□□□□ -1.55
VPS8-220ENST00000469713 SAP30BPQ9UHR5 308 aaKnown RBP5.37□□□□□ -1.55
VPS8-220ENST00000469713 IPPQ9Y573 584 aa5.37□□□□□ -1.55
VPS8-220ENST00000469713 GOLGA6CA6NDK9 693 aa5.36□□□□□ -1.55
VPS8-220ENST00000469713 GOLGA6BA6NDN3 693 aa5.36□□□□□ -1.55
VPS8-220ENST00000469713 MROH6A6NGR9 719 aa5.36□□□□□ -1.55
VPS8-220ENST00000469713 VSTM5A8MXK1 200 aa5.36□□□□□ -1.55
VPS8-220ENST00000469713 OFD1O75665 1012 aa5.36□□□□□ -1.55
VPS8-220ENST00000469713 ALDH1A2O94788 518 aa5.36□□□□□ -1.55
VPS8-220ENST00000469713 C8AP07357 584 aa5.36□□□□□ -1.55
VPS8-220ENST00000469713 GOLGA6DP0CG33 693 aa5.36□□□□□ -1.55
VPS8-220ENST00000469713 U2AF1L5P0DN76 240 aaPredicted RBP5.36□□□□□ -1.55
VPS8-220ENST00000469713 HSPA6P17066 643 aa5.36□□□□□ -1.55
VPS8-220ENST00000469713 PDCP20941 246 aa5.36□□□□□ -1.55
VPS8-220ENST00000469713 ADSLP30566 484 aaPredicted RBP5.36□□□□□ -1.55
VPS8-220ENST00000469713 WASP42768 502 aa5.36□□□□□ -1.55
VPS8-220ENST00000469713 U2AF1Q01081 240 aaKnown RBP eCLIP5.36□□□□□ -1.55
VPS8-220ENST00000469713 MGAT2Q10469 447 aa5.36□□□□□ -1.55
VPS8-220ENST00000469713 GTF2H3Q13889 308 aa5.36□□□□□ -1.55
VPS8-220ENST00000469713 SEPT2Q15019 361 aa5.36□□□□□ -1.55
VPS8-220ENST00000469713 ACAP1Q15027 740 aa5.36□□□□□ -1.55
VPS8-220ENST00000469713 GFOD2Q3B7J2 385 aa5.36□□□□□ -1.55
VPS8-220ENST00000469713 MINDY4Q4G0A6 757 aa5.36□□□□□ -1.55
VPS8-220ENST00000469713 B3GNT9Q6UX72 402 aa5.36□□□□□ -1.55
VPS8-220ENST00000469713 TAS1R1Q7RTX1 841 aa5.36□□□□□ -1.55
VPS8-220ENST00000469713 KBTBD2Q8IY47 623 aa5.36□□□□□ -1.55
VPS8-220ENST00000469713 OR14K1Q8NGZ2 314 aa5.36□□□□□ -1.55
VPS8-220ENST00000469713 SNX33Q8WV41 574 aa5.36□□□□□ -1.55
VPS8-220ENST00000469713 GCDHQ92947 438 aaPredicted RBP5.36□□□□□ -1.55
VPS8-220ENST00000469713 HPS3Q969F9 1004 aa5.36□□□□□ -1.55
VPS8-220ENST00000469713 RELTQ969Z4 430 aa5.36□□□□□ -1.55
VPS8-220ENST00000469713 CCDC136Q96JN2 1154 aa5.36□□□□□ -1.55
VPS8-220ENST00000469713 C14orf93Q9H972 538 aaKnown RBP5.36□□□□□ -1.55
VPS8-220ENST00000469713 TLR9Q9NR96 1032 aa5.36□□□□□ -1.55
VPS8-220ENST00000469713 ING3Q9NXR8 418 aa5.36□□□□□ -1.55
VPS8-220ENST00000469713 GOLGA6AQ9NYA3 693 aa5.36□□□□□ -1.55
VPS8-220ENST00000469713 RPTORQ8N122 1335 aa5.36□□□□□ -1.55
VPS8-220ENST00000469713 KIF3BO15066 747 aa5.35□□□□□ -1.55
VPS8-220ENST00000469713 TBX4P57082 545 aa5.35□□□□□ -1.55
VPS8-220ENST00000469713 ATP2C1P98194 919 aaPredicted RBP5.35□□□□□ -1.55
VPS8-220ENST00000469713 IL10RAQ13651 578 aa5.35□□□□□ -1.55
VPS8-220ENST00000469713 C19orf54Q5BKX5 351 aa5.35□□□□□ -1.55
VPS8-220ENST00000469713 ZMAT1Q5H9K5 638 aa5.35□□□□□ -1.55
VPS8-220ENST00000469713 Q6ZVL8 140 aa5.35□□□□□ -1.55
VPS8-220ENST00000469713 USP30Q70CQ3 517 aa5.35□□□□□ -1.55
VPS8-220ENST00000469713 USP45Q70EL2 814 aa5.35□□□□□ -1.55
VPS8-220ENST00000469713 GRAMD1CQ8IYS0 662 aa5.35□□□□□ -1.55
VPS8-220ENST00000469713 HOXB13Q92826 284 aaPredicted RBP5.35□□□□□ -1.55
VPS8-220ENST00000469713 KAT5Q92993 513 aa5.35□□□□□ -1.55
VPS8-220ENST00000469713 RUNDC1Q96C34 613 aa5.35□□□□□ -1.55
VPS8-220ENST00000469713 SLC7A6OSQ96CW6 309 aaPredicted RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms