RNA–Protein interactions for RNA: ENST00000469498.1

GAPVD1-213, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 385 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-213ENST00000469498 RTP1P59025 263 aa9.25□□□□□ -0.93
GAPVD1-213ENST00000469498 TYRO3Q06418 890 aa9.25□□□□□ -0.93
GAPVD1-213ENST00000469498 EHHADHQ08426 723 aa9.25□□□□□ -0.93
GAPVD1-213ENST00000469498 MORC3Q14149 939 aa9.25□□□□□ -0.93
GAPVD1-213ENST00000469498 TFDP1Q14186 410 aa9.25□□□□□ -0.93
GAPVD1-213ENST00000469498 KCNB1Q14721 858 aa9.25□□□□□ -0.93
GAPVD1-213ENST00000469498 PPP2R5AQ15172 486 aa9.25□□□□□ -0.93
GAPVD1-213ENST00000469498 STX1AQ16623 288 aa9.25□□□□□ -0.93
GAPVD1-213ENST00000469498 DPCR1Q3MIW9 517 aa9.25□□□□□ -0.93
GAPVD1-213ENST00000469498 NT5DC1Q5TFE4 455 aa9.25□□□□□ -0.93
GAPVD1-213ENST00000469498 ZNF658Q5TYW1 1059 aaPredicted RBP9.25□□□□□ -0.93
GAPVD1-213ENST00000469498 SLC39A5Q6ZMH5 540 aa9.25□□□□□ -0.93
GAPVD1-213ENST00000469498 NECAB2Q7Z6G3 386 aa9.25□□□□□ -0.93
GAPVD1-213ENST00000469498 SERINC5Q86VE9 423 aa9.25□□□□□ -0.93
GAPVD1-213ENST00000469498 FAM178BQ8IXR5 827 aa9.25□□□□□ -0.93
GAPVD1-213ENST00000469498 FAM126BQ8IXS8 530 aa9.25□□□□□ -0.93
GAPVD1-213ENST00000469498 KIAA0319LQ8IZA0 1049 aa9.25□□□□□ -0.93
GAPVD1-213ENST00000469498 RNF149Q8NC42 400 aa9.25□□□□□ -0.93
GAPVD1-213ENST00000469498 KIAA0895Q8NCT3 520 aa9.25□□□□□ -0.93
GAPVD1-213ENST00000469498 DEPTORQ8TB45 409 aa9.25□□□□□ -0.93
GAPVD1-213ENST00000469498 PRPF31Q8WWY3 499 aaKnown RBP9.25□□□□□ -0.93
GAPVD1-213ENST00000469498 DHX38Q92620 1227 aaKnown RBP9.25□□□□□ -0.93
GAPVD1-213ENST00000469498 LARSQ9P2J5 1176 aaKnown RBP9.25□□□□□ -0.93
GAPVD1-213ENST00000469498 SEL1LQ9UBV2 794 aa9.25□□□□□ -0.93
GAPVD1-213ENST00000469498 MAPK8IP1Q9UQF2 711 aa9.25□□□□□ -0.93
GAPVD1-213ENST00000469498 GINS2Q9Y248 185 aa9.25□□□□□ -0.93
GAPVD1-213ENST00000469498 ATP11BQ9Y2G3 1177 aa9.25□□□□□ -0.93
GAPVD1-213ENST00000469498 GBF1Q92538 1859 aa9.25□□□□□ -0.93
GAPVD1-213ENST00000469498 A0A087WZ62 844 aa9.24□□□□□ -0.93
GAPVD1-213ENST00000469498 TLR3O15455 904 aaKnown RBP9.24□□□□□ -0.93
GAPVD1-213ENST00000469498 LETM1O95202 739 aaPredicted RBP9.24□□□□□ -0.93
GAPVD1-213ENST00000469498 BMP6P22004 513 aa9.24□□□□□ -0.93
GAPVD1-213ENST00000469498 SSTR3P32745 418 aaPredicted RBP9.24□□□□□ -0.93
GAPVD1-213ENST00000469498 CDK7P50613 346 aa9.24□□□□□ -0.93
GAPVD1-213ENST00000469498 GPC3P51654 580 aa9.24□□□□□ -0.93
GAPVD1-213ENST00000469498 NCKAP1LP55160 1127 aa9.24□□□□□ -0.93
GAPVD1-213ENST00000469498 NLRP11P59045 1033 aaKnown RBP9.24□□□□□ -0.93
GAPVD1-213ENST00000469498 NLRP12P59046 1061 aa9.24□□□□□ -0.93
GAPVD1-213ENST00000469498 MRPS6P82932 125 aaKnown RBP9.24□□□□□ -0.93
GAPVD1-213ENST00000469498 STK4Q13043 487 aa9.24□□□□□ -0.93
GAPVD1-213ENST00000469498 PTK7Q13308 1070 aa9.24□□□□□ -0.93
GAPVD1-213ENST00000469498 MXD4Q14582 209 aaPredicted RBP9.24□□□□□ -0.93
GAPVD1-213ENST00000469498 SNX17Q15036 470 aa9.24□□□□□ -0.93
GAPVD1-213ENST00000469498 LRRC26Q2I0M4 334 aa9.24□□□□□ -0.93
GAPVD1-213ENST00000469498 KIZQ2M2Z5 673 aa9.24□□□□□ -0.93
GAPVD1-213ENST00000469498 ZC2HC1CQ53FD0 456 aaPredicted RBP9.24□□□□□ -0.93
GAPVD1-213ENST00000469498 L1TD1Q5T7N2 865 aaKnown RBP9.24□□□□□ -0.93
GAPVD1-213ENST00000469498 KLHL10Q6JEL2 608 aa9.24□□□□□ -0.93
GAPVD1-213ENST00000469498 TAF2Q6P1X5 1199 aa9.24□□□□□ -0.93
GAPVD1-213ENST00000469498 C11orf57Q6ZUT1 292 aaPredicted RBP9.24□□□□□ -0.93
GAPVD1-213ENST00000469498 HAUS6Q7Z4H7 955 aa9.24□□□□□ -0.93
GAPVD1-213ENST00000469498 NELFCDQ8IXH7 590 aa9.24□□□□□ -0.93
GAPVD1-213ENST00000469498 TRIML1Q8N9V2 468 aa9.24□□□□□ -0.93
GAPVD1-213ENST00000469498 FIZ1Q96SL8 496 aa9.24□□□□□ -0.93
GAPVD1-213ENST00000469498 OSMRQ99650 979 aa9.24□□□□□ -0.93
GAPVD1-213ENST00000469498 FDXACB1Q9BRP7 624 aaPredicted RBP9.24□□□□□ -0.93
GAPVD1-213ENST00000469498 OLFML3Q9NRN5 406 aa9.24□□□□□ -0.93
GAPVD1-213ENST00000469498 CTNND2Q9UQB3 1225 aa9.24□□□□□ -0.93
GAPVD1-213ENST00000469498 CDY2AQ9Y6F7 541 aa9.24□□□□□ -0.93
GAPVD1-213ENST00000469498 MROH7Q68CQ1 1323 aa9.24□□□□□ -0.93
GAPVD1-213ENST00000469498 PHLPP2Q6ZVD8 1323 aa9.24□□□□□ -0.93
GAPVD1-213ENST00000469498 KIAA1671Q9BY89 1806 aa9.24□□□□□ -0.93
GAPVD1-213ENST00000469498 ZMYM2Q9UBW7 1377 aa9.24□□□□□ -0.93
GAPVD1-213ENST00000469498 DENND3A2RUS2 1198 aa9.23□□□□□ -0.93
GAPVD1-213ENST00000469498 CCDC85CA6NKD9 419 aa9.23□□□□□ -0.93
GAPVD1-213ENST00000469498 M0QZ92 97 aa9.23□□□□□ -0.93
GAPVD1-213ENST00000469498 PRPF6O94906 941 aaKnown RBP9.23□□□□□ -0.93
GAPVD1-213ENST00000469498 CD4P01730 458 aa9.23□□□□□ -0.93
GAPVD1-213ENST00000469498 CCDC192P0DO97 292 aa9.23□□□□□ -0.93
GAPVD1-213ENST00000469498 MAPTP10636 758 aaKnown RBP9.23□□□□□ -0.93
GAPVD1-213ENST00000469498 THPOP40225 353 aa9.23□□□□□ -0.93
GAPVD1-213ENST00000469498 PRCPP42785 496 aa9.23□□□□□ -0.93
GAPVD1-213ENST00000469498 PHKA2P46019 1235 aa9.23□□□□□ -0.93
GAPVD1-213ENST00000469498 SMTNP53814 917 aa9.23□□□□□ -0.93
GAPVD1-213ENST00000469498 TLE2Q04725 743 aa9.23□□□□□ -0.93
GAPVD1-213ENST00000469498 PSMD2Q13200 908 aa9.23□□□□□ -0.93
GAPVD1-213ENST00000469498 TRIM71Q2Q1W2 868 aaKnown RBP9.23□□□□□ -0.93
GAPVD1-213ENST00000469498 SWT1Q5T5J6 900 aaKnown RBP9.23□□□□□ -0.93
GAPVD1-213ENST00000469498 CDCA2Q69YH5 1023 aaPredicted RBP9.23□□□□□ -0.93
GAPVD1-213ENST00000469498 RSPH3Q86UC2 560 aa9.23□□□□□ -0.93
GAPVD1-213ENST00000469498 ZBTB8OSQ8IWT0 167 aa9.23□□□□□ -0.93
GAPVD1-213ENST00000469498 MYOCDQ8IZQ8 938 aa9.23□□□□□ -0.93
GAPVD1-213ENST00000469498 SPIRE2Q8WWL2 714 aa9.23□□□□□ -0.93
GAPVD1-213ENST00000469498 ZFRQ96KR1 1074 aaKnown RBP9.23□□□□□ -0.93
GAPVD1-213ENST00000469498 FUCA2Q9BTY2 467 aa9.23□□□□□ -0.93
GAPVD1-213ENST00000469498 SEZ6LQ9BYH1 1024 aa9.23□□□□□ -0.93
GAPVD1-213ENST00000469498 FAM117AQ9C073 453 aa9.23□□□□□ -0.93
GAPVD1-213ENST00000469498 DNAJC25Q9H1X3 360 aa9.23□□□□□ -0.93
GAPVD1-213ENST00000469498 C17orf75Q9HAS0 396 aa9.23□□□□□ -0.93
GAPVD1-213ENST00000469498 ANO10Q9NW15 660 aa9.23□□□□□ -0.93
GAPVD1-213ENST00000469498 ARHGAP28Q9P2N2 729 aa9.23□□□□□ -0.93
GAPVD1-213ENST00000469498 TRPV2Q9Y5S1 764 aa9.23□□□□□ -0.93
GAPVD1-213ENST00000469498 UBE4BO95155 1302 aa9.23□□□□□ -0.93
GAPVD1-213ENST00000469498 FNDC1Q4ZHG4 1894 aaPredicted RBP9.23□□□□□ -0.93
GAPVD1-213ENST00000469498 BRCA2P51587 3418 aa9.22□□□□□ -0.93
GAPVD1-213ENST00000469498 TRIM49BA6NDI0 452 aa9.22□□□□□ -0.93
GAPVD1-213ENST00000469498 DCDC2CA8MYV0 355 aa9.22□□□□□ -0.93
GAPVD1-213ENST00000469498 INO80B-WBP1J3KQ70 363 aa9.22□□□□□ -0.93
GAPVD1-213ENST00000469498 EIF3DO15371 548 aaKnown RBP eCLIP9.22□□□□□ -0.93
GAPVD1-213ENST00000469498 ASAP2O43150 1006 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms