RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 MRPL44Q9H9J2 332 aaKnown RBP8.98□□□□□ -0.97
NPHP3-204ENST00000469232 SETD4Q9NVD3 440 aa8.98□□□□□ -0.97
NPHP3-204ENST00000469232 HDAC6Q9UBN7 1215 aa8.98□□□□□ -0.97
NPHP3-204ENST00000469232 RABGEF1Q9UJ41 708 aa8.98□□□□□ -0.97
NPHP3-204ENST00000469232 STYXL1Q9Y6J8 313 aa8.98□□□□□ -0.97
NPHP3-204ENST00000469232 CENPFP49454 3210 aa8.98□□□□□ -0.97
NPHP3-204ENST00000469232 KAT6AQ92794 2004 aa8.98□□□□□ -0.97
NPHP3-204ENST00000469232 BICDL2A1A5D9 508 aa8.98□□□□□ -0.97
NPHP3-204ENST00000469232 DNM2P50570 870 aa8.98□□□□□ -0.97
NPHP3-204ENST00000469232 MARSP56192 900 aaKnown RBP8.98□□□□□ -0.97
NPHP3-204ENST00000469232 PEX3P56589 373 aa8.98□□□□□ -0.97
NPHP3-204ENST00000469232 RBL2Q08999 1139 aa8.98□□□□□ -0.97
NPHP3-204ENST00000469232 ANKRD40Q6AI12 368 aa8.98□□□□□ -0.97
NPHP3-204ENST00000469232 TAF2Q6P1X5 1199 aa8.98□□□□□ -0.97
NPHP3-204ENST00000469232 SARM1Q6SZW1 724 aa8.98□□□□□ -0.97
NPHP3-204ENST00000469232 APTXQ7Z2E3 356 aaKnown RBP8.98□□□□□ -0.97
NPHP3-204ENST00000469232 SERINC5Q86VE9 423 aa8.98□□□□□ -0.97
NPHP3-204ENST00000469232 ZNF410Q86VK4 478 aa8.98□□□□□ -0.97
NPHP3-204ENST00000469232 GOLGA5Q8TBA6 731 aa8.98□□□□□ -0.97
NPHP3-204ENST00000469232 NOC3LQ8WTT2 800 aaKnown RBP8.98□□□□□ -0.97
NPHP3-204ENST00000469232 IFT74Q96LB3 600 aa8.98□□□□□ -0.97
NPHP3-204ENST00000469232 ADAMTS10Q9H324 1103 aa8.98□□□□□ -0.97
NPHP3-204ENST00000469232 FZD8Q9H461 694 aa8.98□□□□□ -0.97
NPHP3-204ENST00000469232 IFT122Q9HBG6 1241 aa8.98□□□□□ -0.97
NPHP3-204ENST00000469232 POLD4Q9HCU8 107 aa8.98□□□□□ -0.97
NPHP3-204ENST00000469232 KMT5AQ9NQR1 393 aa8.98□□□□□ -0.97
NPHP3-204ENST00000469232 TYW1Q9NV66 732 aaKnown RBP8.98□□□□□ -0.97
NPHP3-204ENST00000469232 SUCLA2Q9P2R7 463 aaPredicted RBP8.98□□□□□ -0.97
NPHP3-204ENST00000469232 EVPLQ92817 2033 aa8.97□□□□□ -0.97
NPHP3-204ENST00000469232 A0A1W2PQ45 241 aaPredicted RBP8.97□□□□□ -0.97
NPHP3-204ENST00000469232 A0A1W2PQY0 241 aa8.97□□□□□ -0.97
NPHP3-204ENST00000469232 C17orf102A2RUQ5 167 aa8.97□□□□□ -0.97
NPHP3-204ENST00000469232 GOLGA6L3A6NEY3 463 aa8.97□□□□□ -0.97
NPHP3-204ENST00000469232 GPR32O75388 356 aa8.97□□□□□ -0.97
NPHP3-204ENST00000469232 PRPF6O94906 941 aaKnown RBP8.97□□□□□ -0.97
NPHP3-204ENST00000469232 GCNT3O95395 438 aa8.97□□□□□ -0.97
NPHP3-204ENST00000469232 COL6A1P12109 1028 aa8.97□□□□□ -0.97
NPHP3-204ENST00000469232 TMOD1P28289 359 aa8.97□□□□□ -0.97
NPHP3-204ENST00000469232 MRE11P49959 708 aa8.97□□□□□ -0.97
NPHP3-204ENST00000469232 GPC3P51654 580 aa8.97□□□□□ -0.97
NPHP3-204ENST00000469232 CLCN3P51790 818 aa8.97□□□□□ -0.97
NPHP3-204ENST00000469232 ENPEPQ07075 957 aa8.97□□□□□ -0.97
NPHP3-204ENST00000469232 KCNA1Q09470 495 aa8.97□□□□□ -0.97
NPHP3-204ENST00000469232 SNX17Q15036 470 aa8.97□□□□□ -0.97
NPHP3-204ENST00000469232 PCBP1Q15365 356 aaKnown RBP eCLIP8.97□□□□□ -0.97
NPHP3-204ENST00000469232 TRIM71Q2Q1W2 868 aaKnown RBP8.97□□□□□ -0.97
NPHP3-204ENST00000469232 ZC2HC1CQ53FD0 456 aaPredicted RBP8.97□□□□□ -0.97
NPHP3-204ENST00000469232 C1orf53Q5VUE5 145 aa8.97□□□□□ -0.97
NPHP3-204ENST00000469232 GDF6Q6KF10 455 aaPredicted RBP8.97□□□□□ -0.97
NPHP3-204ENST00000469232 MAEAQ7L5Y9 396 aa8.97□□□□□ -0.97
NPHP3-204ENST00000469232 LUZP1Q86V48 1076 aa8.97□□□□□ -0.97
NPHP3-204ENST00000469232 LRRC71Q8N4P6 559 aa8.97□□□□□ -0.97
NPHP3-204ENST00000469232 AOPEPQ8N6M6 819 aa8.97□□□□□ -0.97
NPHP3-204ENST00000469232 ANKLE1Q8NAG6 615 aa8.97□□□□□ -0.97
NPHP3-204ENST00000469232 CEP63Q96MT8 703 aa8.97□□□□□ -0.97
NPHP3-204ENST00000469232 ACCSQ96QU6 501 aa8.97□□□□□ -0.97
NPHP3-204ENST00000469232 C2orf40Q9H1Z8 148 aa8.97□□□□□ -0.97
NPHP3-204ENST00000469232 THAP9Q9H5L6 903 aa8.97□□□□□ -0.97
NPHP3-204ENST00000469232 TMEM206Q9H813 350 aa8.97□□□□□ -0.97
NPHP3-204ENST00000469232 GRPEL1Q9HAV7 217 aa8.97□□□□□ -0.97
NPHP3-204ENST00000469232 TBC1D7Q9P0N9 293 aa8.97□□□□□ -0.97
NPHP3-204ENST00000469232 HCSTQ9UBK5 93 aa8.97□□□□□ -0.97
NPHP3-204ENST00000469232 TBX20Q9UMR3 447 aa8.97□□□□□ -0.97
NPHP3-204ENST00000469232 MAPK8IP1Q9UQF2 711 aa8.97□□□□□ -0.97
NPHP3-204ENST00000469232 NFE2L3Q9Y4A8 694 aa8.97□□□□□ -0.97
NPHP3-204ENST00000469232 TRIP12Q14669 1992 aaPredicted RBP8.96□□□□□ -0.98
NPHP3-204ENST00000469232 DENND3A2RUS2 1198 aa8.96□□□□□ -0.98
NPHP3-204ENST00000469232 ABLIM1O14639 778 aa8.96□□□□□ -0.98
NPHP3-204ENST00000469232 MAPK13O15264 365 aa8.96□□□□□ -0.98
NPHP3-204ENST00000469232 SLC16A4O15374 487 aa8.96□□□□□ -0.98
NPHP3-204ENST00000469232 TREHO43280 583 aa8.96□□□□□ -0.98
NPHP3-204ENST00000469232 CAND2O75155 1236 aa8.96□□□□□ -0.98
NPHP3-204ENST00000469232 SGPL1O95470 568 aa8.96□□□□□ -0.98
NPHP3-204ENST00000469232 PROZP22891 400 aa8.96□□□□□ -0.98
NPHP3-204ENST00000469232 MBTD1Q05BQ5 628 aa8.96□□□□□ -0.98
NPHP3-204ENST00000469232 ITGA7Q13683 1181 aa8.96□□□□□ -0.98
NPHP3-204ENST00000469232 TFDP1Q14186 410 aa8.96□□□□□ -0.98
NPHP3-204ENST00000469232 AMHR2Q16671 573 aa8.96□□□□□ -0.98
NPHP3-204ENST00000469232 FAM26DQ5JW98 314 aa8.96□□□□□ -0.98
NPHP3-204ENST00000469232 SLC39A4Q6P5W5 647 aa8.96□□□□□ -0.98
NPHP3-204ENST00000469232 ZPBP2Q6X784 338 aa8.96□□□□□ -0.98
NPHP3-204ENST00000469232 RUFY4Q6ZNE9 571 aa8.96□□□□□ -0.98
NPHP3-204ENST00000469232 FAM43BQ6ZT52 329 aaPredicted RBP8.96□□□□□ -0.98
NPHP3-204ENST00000469232 TRMT1LQ7Z2T5 733 aaKnown RBP8.96□□□□□ -0.98
NPHP3-204ENST00000469232 C7orf31Q8N865 590 aa8.96□□□□□ -0.98
NPHP3-204ENST00000469232 BORCS6Q96GS4 357 aa8.96□□□□□ -0.98
NPHP3-204ENST00000469232 FBXL18Q96ME1 805 aa8.96□□□□□ -0.98
NPHP3-204ENST00000469232 DEFB118Q96PH6 123 aa8.96□□□□□ -0.98
NPHP3-204ENST00000469232 MKNK1Q9BUB5 465 aa8.96□□□□□ -0.98
NPHP3-204ENST00000469232 GBP3Q9H0R5 595 aa8.96□□□□□ -0.98
NPHP3-204ENST00000469232 ZHX3Q9H4I2 956 aa8.96□□□□□ -0.98
NPHP3-204ENST00000469232 PTPRHQ9HD43 1115 aa8.96□□□□□ -0.98
NPHP3-204ENST00000469232 CTNND2Q9UQB3 1225 aa8.96□□□□□ -0.98
NPHP3-204ENST00000469232 A0A0U1RQG5 324 aaPredicted RBP8.95□□□□□ -0.98
NPHP3-204ENST00000469232 TRIM49BA6NDI0 452 aa8.95□□□□□ -0.98
NPHP3-204ENST00000469232 K7ENM7 598 aa8.95□□□□□ -0.98
NPHP3-204ENST00000469232 ARVCFO00192 962 aa8.95□□□□□ -0.98
NPHP3-204ENST00000469232 ACKR2O00590 384 aa8.95□□□□□ -0.98
NPHP3-204ENST00000469232 EDN1P05305 212 aa8.95□□□□□ -0.98
NPHP3-204ENST00000469232 CYP2C9P11712 490 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms