RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 PDRG1Q9NUG6 133 aa13.73□□□□□ -0.21
HDAC3-204ENST00000469207 AGPAT5Q9NUQ2 364 aa13.73□□□□□ -0.21
HDAC3-204ENST00000469207 MIOSQ9NXC5 875 aa13.73□□□□□ -0.21
HDAC3-204ENST00000469207 IRAK3Q9Y616 596 aa13.73□□□□□ -0.21
HDAC3-204ENST00000469207 DMDP11532 3685 aa13.73□□□□□ -0.21
HDAC3-204ENST00000469207 F8W810 466 aa13.72□□□□□ -0.21
HDAC3-204ENST00000469207 NRP1O14786 923 aa13.72□□□□□ -0.21
HDAC3-204ENST00000469207 LILRB3O75022 631 aa13.72□□□□□ -0.21
HDAC3-204ENST00000469207 ALDH2P05091 517 aa13.72□□□□□ -0.21
HDAC3-204ENST00000469207 P4HBP07237 508 aaKnown RBP13.72□□□□□ -0.21
HDAC3-204ENST00000469207 CNPP09543 421 aaKnown RBP13.72□□□□□ -0.21
HDAC3-204ENST00000469207 SKIP12755 728 aa13.72□□□□□ -0.21
HDAC3-204ENST00000469207 KLRC2P26717 231 aa13.72□□□□□ -0.21
HDAC3-204ENST00000469207 POLGP54098 1239 aaPredicted RBP13.72□□□□□ -0.21
HDAC3-204ENST00000469207 CYP4A11Q02928 519 aa13.72□□□□□ -0.21
HDAC3-204ENST00000469207 MTMR3Q13615 1198 aa13.72□□□□□ -0.21
HDAC3-204ENST00000469207 BMS1Q14692 1282 aaKnown RBP13.72□□□□□ -0.21
HDAC3-204ENST00000469207 KIAA1841Q6NSI8 718 aa13.72□□□□□ -0.21
HDAC3-204ENST00000469207 CABP7Q86V35 215 aa13.72□□□□□ -0.21
HDAC3-204ENST00000469207 POTEDQ86YR6 584 aa13.72□□□□□ -0.21
HDAC3-204ENST00000469207 PGBD4Q96DM1 585 aa13.72□□□□□ -0.21
HDAC3-204ENST00000469207 CPB2Q96IY4 423 aa13.72□□□□□ -0.21
HDAC3-204ENST00000469207 PRRX2Q99811 253 aa13.72□□□□□ -0.21
HDAC3-204ENST00000469207 EIF2AQ9BY44 585 aaKnown RBP13.72□□□□□ -0.21
HDAC3-204ENST00000469207 RSAD1Q9HA92 442 aa13.72□□□□□ -0.21
HDAC3-204ENST00000469207 FAN1Q9Y2M0 1017 aa13.72□□□□□ -0.21
HDAC3-204ENST00000469207 HES2Q9Y543 173 aa13.72□□□□□ -0.21
HDAC3-204ENST00000469207 CCDC194A0A1B0GVG4 234 aa13.71□□□□□ -0.21
HDAC3-204ENST00000469207 CTDNEP1O95476 244 aa13.71□□□□□ -0.21
HDAC3-204ENST00000469207 YWHABP31946 246 aaKnown RBP13.71□□□□□ -0.21
HDAC3-204ENST00000469207 RAB27AP51159 221 aa13.71□□□□□ -0.21
HDAC3-204ENST00000469207 EPHA7Q15375 998 aa13.71□□□□□ -0.21
HDAC3-204ENST00000469207 XKR9Q5GH70 373 aa13.71□□□□□ -0.21
HDAC3-204ENST00000469207 NCAPH2Q6IBW4 605 aa13.71□□□□□ -0.21
HDAC3-204ENST00000469207 GALNT17Q6IS24 598 aa13.71□□□□□ -0.21
HDAC3-204ENST00000469207 NEK8Q86SG6 692 aa13.71□□□□□ -0.21
HDAC3-204ENST00000469207 GPR149Q86SP6 731 aa13.71□□□□□ -0.21
HDAC3-204ENST00000469207 UBALD2Q8IYN6 164 aa13.71□□□□□ -0.21
HDAC3-204ENST00000469207 TDRD5Q8NAT2 981 aaKnown RBP13.71□□□□□ -0.21
HDAC3-204ENST00000469207 RNF149Q8NC42 400 aa13.71□□□□□ -0.21
HDAC3-204ENST00000469207 SLC7A3Q8WY07 619 aa13.71□□□□□ -0.21
HDAC3-204ENST00000469207 FAM20AQ96MK3 541 aa13.71□□□□□ -0.21
HDAC3-204ENST00000469207 FAM193BQ96PV7 902 aaPredicted RBP13.71□□□□□ -0.21
HDAC3-204ENST00000469207 LXNQ9BS40 222 aa13.71□□□□□ -0.21
HDAC3-204ENST00000469207 XPNPEP1Q9NQW7 623 aa13.71□□□□□ -0.21
HDAC3-204ENST00000469207 TPCN1Q9ULQ1 816 aa13.71□□□□□ -0.21
HDAC3-204ENST00000469207 PRG3Q9Y2Y8 225 aaPredicted RBP13.71□□□□□ -0.21
HDAC3-204ENST00000469207 PI15O43692 258 aa13.7□□□□□ -0.22
HDAC3-204ENST00000469207 MARCH6O60337 910 aa13.7□□□□□ -0.22
HDAC3-204ENST00000469207 GFRA3O60609 400 aa13.7□□□□□ -0.22
HDAC3-204ENST00000469207 SLITRK3O94933 977 aa13.7□□□□□ -0.22
HDAC3-204ENST00000469207 SPATA31D3P0C874 917 aa13.7□□□□□ -0.22
HDAC3-204ENST00000469207 CLCN4P51793 760 aa13.7□□□□□ -0.22
HDAC3-204ENST00000469207 NR5A1Q13285 461 aa13.7□□□□□ -0.22
HDAC3-204ENST00000469207 GIT2Q14161 759 aa13.7□□□□□ -0.22
HDAC3-204ENST00000469207 PPP4R3AQ6IN85 833 aa13.7□□□□□ -0.22
HDAC3-204ENST00000469207 CPLX2Q6PUV4 134 aaKnown RBP13.7□□□□□ -0.22
HDAC3-204ENST00000469207 SPATA31D4Q6ZUB0 917 aa13.7□□□□□ -0.22
HDAC3-204ENST00000469207 SRGAP1Q7Z6B7 1085 aa13.7□□□□□ -0.22
HDAC3-204ENST00000469207 FERMT3Q86UX7 667 aa13.7□□□□□ -0.22
HDAC3-204ENST00000469207 CDR2LQ86X02 465 aaPredicted RBP13.7□□□□□ -0.22
HDAC3-204ENST00000469207 TPH2Q8IWU9 490 aa13.7□□□□□ -0.22
HDAC3-204ENST00000469207 C4orf19Q8IY42 314 aa13.7□□□□□ -0.22
HDAC3-204ENST00000469207 ZDHHC14Q8IZN3 488 aa13.7□□□□□ -0.22
HDAC3-204ENST00000469207 URGCPQ8TCY9 931 aa13.7□□□□□ -0.22
HDAC3-204ENST00000469207 PSPC1Q8WXF1 523 aaKnown RBP13.7□□□□□ -0.22
HDAC3-204ENST00000469207 RABGGTAQ92696 567 aa13.7□□□□□ -0.22
HDAC3-204ENST00000469207 B3GALT6Q96L58 329 aa13.7□□□□□ -0.22
HDAC3-204ENST00000469207 GAD1Q99259 594 aa13.7□□□□□ -0.22
HDAC3-204ENST00000469207 JPH2Q9BR39 696 aaPredicted RBP13.7□□□□□ -0.22
HDAC3-204ENST00000469207 TM6SF1Q9BZW5 370 aa13.7□□□□□ -0.22
HDAC3-204ENST00000469207 DZANK1Q9NVP4 752 aa13.7□□□□□ -0.22
HDAC3-204ENST00000469207 MARCH5Q9NX47 278 aa13.7□□□□□ -0.22
HDAC3-204ENST00000469207 IPPQ9Y573 584 aa13.7□□□□□ -0.22
HDAC3-204ENST00000469207 SPDYE4A6NLX3 237 aa13.69□□□□□ -0.22
HDAC3-204ENST00000469207 WNT7AO00755 349 aa13.69□□□□□ -0.22
HDAC3-204ENST00000469207 GALR2O43603 387 aaPredicted RBP13.69□□□□□ -0.22
HDAC3-204ENST00000469207 N4BP1O75113 896 aaKnown RBP13.69□□□□□ -0.22
HDAC3-204ENST00000469207 ITGA4P13612 1032 aa13.69□□□□□ -0.22
HDAC3-204ENST00000469207 FDPSP14324 419 aaKnown RBP13.69□□□□□ -0.22
HDAC3-204ENST00000469207 NCLP19338 710 aaKnown RBP13.69□□□□□ -0.22
HDAC3-204ENST00000469207 OR1G1P47890 313 aa13.69□□□□□ -0.22
HDAC3-204ENST00000469207 AK2P54819 239 aa13.69□□□□□ -0.22
HDAC3-204ENST00000469207 SPIRE1Q08AE8 756 aa13.69□□□□□ -0.22
HDAC3-204ENST00000469207 EMC2Q15006 297 aa13.69□□□□□ -0.22
HDAC3-204ENST00000469207 COLGALT2Q8IYK4 626 aa13.69□□□□□ -0.22
HDAC3-204ENST00000469207 ST13P5Q8NFI4 369 aaPredicted RBP13.69□□□□□ -0.22
HDAC3-204ENST00000469207 ASAP3Q8TDY4 903 aa13.69□□□□□ -0.22
HDAC3-204ENST00000469207 RSAD2Q8WXG1 361 aa13.69□□□□□ -0.22
HDAC3-204ENST00000469207 ZFP42Q96MM3 310 aa13.69□□□□□ -0.22
HDAC3-204ENST00000469207 APOL6Q9BWW8 343 aa13.69□□□□□ -0.22
HDAC3-204ENST00000469207 ZFHX2Q9C0A1 2572 aaPredicted RBP13.68□□□□□ -0.22
HDAC3-204ENST00000469207 ARL5CA6NH57 179 aa13.68□□□□□ -0.22
HDAC3-204ENST00000469207 NARSO43776 548 aaKnown RBP13.68□□□□□ -0.22
HDAC3-204ENST00000469207 ST18O60284 1047 aa13.68□□□□□ -0.22
HDAC3-204ENST00000469207 TSPAN1O60635 241 aa13.68□□□□□ -0.22
HDAC3-204ENST00000469207 MLH1P40692 756 aa13.68□□□□□ -0.22
HDAC3-204ENST00000469207 RFC5P40937 340 aa13.68□□□□□ -0.22
HDAC3-204ENST00000469207 SCNN1GP51170 649 aa13.68□□□□□ -0.22
HDAC3-204ENST00000469207 FOSBP53539 338 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms