RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 DCAF4L1Q3SXM0 396 aa9.43□□□□□ -0.9
SSBP1-208ENST00000469123 NAALADL2Q58DX5 795 aa9.43□□□□□ -0.9
SSBP1-208ENST00000469123 PPP2R2DQ66LE6 453 aa9.43□□□□□ -0.9
SSBP1-208ENST00000469123 SLC27A1Q6PCB7 646 aa9.43□□□□□ -0.9
SSBP1-208ENST00000469123 SHC4Q6S5L8 630 aa9.43□□□□□ -0.9
SSBP1-208ENST00000469123 STXBP4Q6ZWJ1 553 aa9.43□□□□□ -0.9
SSBP1-208ENST00000469123 USP49Q70CQ1 688 aa9.43□□□□□ -0.9
SSBP1-208ENST00000469123 RTN4RL1Q86UN2 441 aaPredicted RBP9.43□□□□□ -0.9
SSBP1-208ENST00000469123 ECHDC2Q86YB7 292 aa9.43□□□□□ -0.9
SSBP1-208ENST00000469123 CEP57L1Q8IYX8 460 aa9.43□□□□□ -0.9
SSBP1-208ENST00000469123 ABI1Q8IZP0 508 aa9.43□□□□□ -0.9
SSBP1-208ENST00000469123 CRIPAKQ8N1N5 446 aa9.43□□□□□ -0.9
SSBP1-208ENST00000469123 ZNF689Q96CS4 500 aaPredicted RBP9.43□□□□□ -0.9
SSBP1-208ENST00000469123 HVCN1Q96D96 273 aa9.43□□□□□ -0.9
SSBP1-208ENST00000469123 TGS1Q96RS0 853 aaKnown RBP9.43□□□□□ -0.9
SSBP1-208ENST00000469123 MRPL9Q9BYD2 267 aaKnown RBP9.43□□□□□ -0.9
SSBP1-208ENST00000469123 OSBPL7Q9BZF2 842 aa9.43□□□□□ -0.9
SSBP1-208ENST00000469123 TRIM6Q9C030 488 aaPredicted RBP9.43□□□□□ -0.9
SSBP1-208ENST00000469123 TMEM117Q9H0C3 514 aa9.43□□□□□ -0.9
SSBP1-208ENST00000469123 ST6GALNAC4Q9H4F1 302 aa9.43□□□□□ -0.9
SSBP1-208ENST00000469123 RC3H2Q9HBD1 1191 aaKnown RBP9.43□□□□□ -0.9
SSBP1-208ENST00000469123 FAM105AQ9NUU6 356 aa9.43□□□□□ -0.9
SSBP1-208ENST00000469123 KBTBD4Q9NVX7 518 aa9.43□□□□□ -0.9
SSBP1-208ENST00000469123 KCNH3Q9ULD8 1083 aa9.43□□□□□ -0.9
SSBP1-208ENST00000469123 FNDC1Q4ZHG4 1894 aaPredicted RBP9.42□□□□□ -0.9
SSBP1-208ENST00000469123 FAM237AA0A1B0GTK4 181 aa9.42□□□□□ -0.9
SSBP1-208ENST00000469123 A0A1B0GUA9 196 aa9.42□□□□□ -0.9
SSBP1-208ENST00000469123 MGEA5O60502 916 aa9.42□□□□□ -0.9
SSBP1-208ENST00000469123 RB1P06400 928 aa9.42□□□□□ -0.9
SSBP1-208ENST00000469123 CA3P07451 260 aa9.42□□□□□ -0.9
SSBP1-208ENST00000469123 ARF4P18085 180 aaPredicted RBP9.42□□□□□ -0.9
SSBP1-208ENST00000469123 HOXA11P31270 313 aaPredicted RBP9.42□□□□□ -0.9
SSBP1-208ENST00000469123 RABGGTBP53611 331 aa9.42□□□□□ -0.9
SSBP1-208ENST00000469123 NCKAP1LP55160 1127 aa9.42□□□□□ -0.9
SSBP1-208ENST00000469123 GIT2Q14161 759 aa9.42□□□□□ -0.9
SSBP1-208ENST00000469123 E2F4Q16254 413 aa9.42□□□□□ -0.9
SSBP1-208ENST00000469123 AMHR2Q16671 573 aa9.42□□□□□ -0.9
SSBP1-208ENST00000469123 TMEM132AQ24JP5 1023 aa9.42□□□□□ -0.9
SSBP1-208ENST00000469123 ARSHQ5FYA8 562 aa9.42□□□□□ -0.9
SSBP1-208ENST00000469123 ZNF598Q86UK7 904 aaKnown RBP9.42□□□□□ -0.9
SSBP1-208ENST00000469123 FAM178BQ8IXR5 827 aa9.42□□□□□ -0.9
SSBP1-208ENST00000469123 CCDC65Q8IXS2 484 aa9.42□□□□□ -0.9
SSBP1-208ENST00000469123 DAW1Q8N136 415 aa9.42□□□□□ -0.9
SSBP1-208ENST00000469123 LRRC43Q8N309 656 aa9.42□□□□□ -0.9
SSBP1-208ENST00000469123 FIBCD1Q8N539 461 aa9.42□□□□□ -0.9
SSBP1-208ENST00000469123 MYCT1Q8N699 235 aa9.42□□□□□ -0.9
SSBP1-208ENST00000469123 PDILTQ8N807 584 aa9.42□□□□□ -0.9
SSBP1-208ENST00000469123 BSNDQ8WZ55 320 aa9.42□□□□□ -0.9
SSBP1-208ENST00000469123 MRPS27Q92552 414 aaKnown RBP9.42□□□□□ -0.9
SSBP1-208ENST00000469123 DDX12PQ92771 950 aa9.42□□□□□ -0.9
SSBP1-208ENST00000469123 CLP1Q92989 425 aaKnown RBP9.42□□□□□ -0.9
SSBP1-208ENST00000469123 DHX58Q96C10 678 aa9.42□□□□□ -0.9
SSBP1-208ENST00000469123 LRCH3Q96II8 777 aa9.42□□□□□ -0.9
SSBP1-208ENST00000469123 ZNF668Q96K58 619 aaPredicted RBP9.42□□□□□ -0.9
SSBP1-208ENST00000469123 PKNOX2Q96KN3 472 aa9.42□□□□□ -0.9
SSBP1-208ENST00000469123 REEP2Q9BRK0 252 aa9.42□□□□□ -0.9
SSBP1-208ENST00000469123 PLVAPQ9BX97 442 aa9.42□□□□□ -0.9
SSBP1-208ENST00000469123 MRPL4Q9BYD3 311 aaKnown RBP9.42□□□□□ -0.9
SSBP1-208ENST00000469123 CCDC113Q9H0I3 377 aa9.42□□□□□ -0.9
SSBP1-208ENST00000469123 ZNF576Q9H609 170 aa9.42□□□□□ -0.9
SSBP1-208ENST00000469123 MINDY3Q9H8M7 445 aa9.42□□□□□ -0.9
SSBP1-208ENST00000469123 AAASQ9NRG9 546 aa9.42□□□□□ -0.9
SSBP1-208ENST00000469123 OLFML3Q9NRN5 406 aa9.42□□□□□ -0.9
SSBP1-208ENST00000469123 KANSL3Q9P2N6 904 aa9.42□□□□□ -0.9
SSBP1-208ENST00000469123 STK39Q9UEW8 545 aa9.42□□□□□ -0.9
SSBP1-208ENST00000469123 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.42□□□□□ -0.9
SSBP1-208ENST00000469123 NLRC5Q86WI3 1866 aa9.41□□□□□ -0.9
SSBP1-208ENST00000469123 FRMD3A2A2Y4 597 aa9.41□□□□□ -0.9
SSBP1-208ENST00000469123 GRXCR1A8MXD5 290 aa9.41□□□□□ -0.9
SSBP1-208ENST00000469123 POLR2DO15514 142 aaKnown RBP9.41□□□□□ -0.9
SSBP1-208ENST00000469123 TRAK2O60296 914 aa9.41□□□□□ -0.9
SSBP1-208ENST00000469123 CSDE1O75534 798 aaKnown RBP9.41□□□□□ -0.9
SSBP1-208ENST00000469123 UPP2O95045 317 aa9.41□□□□□ -0.9
SSBP1-208ENST00000469123 SLFN14P0C7P3 912 aa9.41□□□□□ -0.9
SSBP1-208ENST00000469123 FGFR4P22455 802 aa9.41□□□□□ -0.9
SSBP1-208ENST00000469123 SYKP43405 635 aa9.41□□□□□ -0.9
SSBP1-208ENST00000469123 ERVK-21P61565 698 aa9.41□□□□□ -0.9
SSBP1-208ENST00000469123 BTG3Q14201 252 aaPredicted RBP9.41□□□□□ -0.9
SSBP1-208ENST00000469123 DHX8Q14562 1220 aaKnown RBP9.41□□□□□ -0.9
SSBP1-208ENST00000469123 HSP90AA2PQ14568 343 aaPredicted RBP9.41□□□□□ -0.9
SSBP1-208ENST00000469123 KYAT1Q16773 422 aa9.41□□□□□ -0.9
SSBP1-208ENST00000469123 KANK3Q6NY19 840 aa9.41□□□□□ -0.9
SSBP1-208ENST00000469123 GLB1LQ6UWU2 654 aa9.41□□□□□ -0.9
SSBP1-208ENST00000469123 ZPBP2Q6X784 338 aa9.41□□□□□ -0.9
SSBP1-208ENST00000469123 MRPL10Q7Z7H8 261 aaKnown RBP9.41□□□□□ -0.9
SSBP1-208ENST00000469123 DEFB123Q8N688 67 aa9.41□□□□□ -0.9
SSBP1-208ENST00000469123 TMEM161BQ8NDZ6 487 aa9.41□□□□□ -0.9
SSBP1-208ENST00000469123 IPO9Q96P70 1041 aaKnown RBP9.41□□□□□ -0.9
SSBP1-208ENST00000469123 C7orf25Q9BPX7 421 aa9.41□□□□□ -0.9
SSBP1-208ENST00000469123 NKX2-4Q9H2Z4 354 aa9.41□□□□□ -0.9
SSBP1-208ENST00000469123 SEMA6BQ9H3T3 888 aa9.41□□□□□ -0.9
SSBP1-208ENST00000469123 EXOC7Q9UPT5 735 aa9.41□□□□□ -0.9
SSBP1-208ENST00000469123 HPSEQ9Y251 543 aa9.41□□□□□ -0.9
SSBP1-208ENST00000469123 TNFSF13BQ9Y275 285 aa9.41□□□□□ -0.9
SSBP1-208ENST00000469123 YBX2Q9Y2T7 364 aaKnown RBP9.41□□□□□ -0.9
SSBP1-208ENST00000469123 GIT1Q9Y2X7 761 aa9.41□□□□□ -0.9
SSBP1-208ENST00000469123 PCDHB2Q9Y5E7 798 aa9.41□□□□□ -0.9
SSBP1-208ENST00000469123 CITO14578 2027 aa9.4□□□□□ -0.9
SSBP1-208ENST00000469123 A0A087X0B3 334 aa9.4□□□□□ -0.9
SSBP1-208ENST00000469123 PVALEFA0A1B0GWK0 134 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms