RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 IFNLR1Q8IU57 520 aaPredicted RBP16.5■□□□□ 0.23
SDCCAG3-209ENST00000468963 VPS52Q8N1B4 723 aa16.5■□□□□ 0.23
SDCCAG3-209ENST00000468963 RNF149Q8NC42 400 aa16.5■□□□□ 0.23
SDCCAG3-209ENST00000468963 BCL7CQ8WUZ0 217 aaPredicted RBP16.5■□□□□ 0.23
SDCCAG3-209ENST00000468963 CASP10Q92851 521 aa16.5■□□□□ 0.23
SDCCAG3-209ENST00000468963 RPGRIP1Q96KN7 1286 aa16.5■□□□□ 0.23
SDCCAG3-209ENST00000468963 MTRQ99707 1265 aa16.5■□□□□ 0.23
SDCCAG3-209ENST00000468963 ZBP1Q9H171 429 aa16.5■□□□□ 0.23
SDCCAG3-209ENST00000468963 DNAJB4Q9UDY4 337 aa16.5■□□□□ 0.23
SDCCAG3-209ENST00000468963 INPP5FQ9Y2H2 1132 aa16.5■□□□□ 0.23
SDCCAG3-209ENST00000468963 HCFC2Q9Y5Z7 792 aa16.5■□□□□ 0.23
SDCCAG3-209ENST00000468963 IRAK3Q9Y616 596 aa16.5■□□□□ 0.23
SDCCAG3-209ENST00000468963 ZNF318Q5VUA4 2279 aa16.5■□□□□ 0.23
SDCCAG3-209ENST00000468963 CTSAP10619 480 aa16.49■□□□□ 0.23
SDCCAG3-209ENST00000468963 XRCC6P12956 609 aaKnown RBP eCLIP16.49■□□□□ 0.23
SDCCAG3-209ENST00000468963 NCLP19338 710 aaKnown RBP16.49■□□□□ 0.23
SDCCAG3-209ENST00000468963 TXKP42681 527 aa16.49■□□□□ 0.23
SDCCAG3-209ENST00000468963 SLC11A1P49279 550 aa16.49■□□□□ 0.23
SDCCAG3-209ENST00000468963 MXD4Q14582 209 aaPredicted RBP16.49■□□□□ 0.23
SDCCAG3-209ENST00000468963 BMS1Q14692 1282 aaKnown RBP16.49■□□□□ 0.23
SDCCAG3-209ENST00000468963 SMG8Q8ND04 991 aaKnown RBP16.49■□□□□ 0.23
SDCCAG3-209ENST00000468963 APOL5Q9BWW9 433 aa16.49■□□□□ 0.23
SDCCAG3-209ENST00000468963 VN1R3Q9BXE9 311 aa16.49■□□□□ 0.23
SDCCAG3-209ENST00000468963 TMEM60Q9H2L4 133 aa16.49■□□□□ 0.23
SDCCAG3-209ENST00000468963 CNTNAP2Q9UHC6 1331 aa16.48■□□□□ 0.23
SDCCAG3-209ENST00000468963 ZDBF2Q9HCK1 2354 aa16.48■□□□□ 0.23
SDCCAG3-209ENST00000468963 A0A087WWV3 80 aa16.48■□□□□ 0.23
SDCCAG3-209ENST00000468963 NEMFO60524 1076 aa16.48■□□□□ 0.23
SDCCAG3-209ENST00000468963 DGAT1O75907 488 aa16.48■□□□□ 0.23
SDCCAG3-209ENST00000468963 ALDH2P05091 517 aa16.48■□□□□ 0.23
SDCCAG3-209ENST00000468963 AXLP30530 894 aa16.48■□□□□ 0.23
SDCCAG3-209ENST00000468963 HOXD11P31277 338 aaPredicted RBP16.48■□□□□ 0.23
SDCCAG3-209ENST00000468963 FOSBP53539 338 aa16.48■□□□□ 0.23
SDCCAG3-209ENST00000468963 ZXDAP98168 799 aa16.48■□□□□ 0.23
SDCCAG3-209ENST00000468963 RNASELQ05823 741 aaKnown RBP16.48■□□□□ 0.23
SDCCAG3-209ENST00000468963 TRIM29Q14134 588 aa16.48■□□□□ 0.23
SDCCAG3-209ENST00000468963 PCBP1Q15365 356 aaKnown RBP eCLIP16.48■□□□□ 0.23
SDCCAG3-209ENST00000468963 BMP8AQ7Z5Y6 402 aa16.48■□□□□ 0.23
SDCCAG3-209ENST00000468963 CNNM3Q8NE01 707 aa16.48■□□□□ 0.23
SDCCAG3-209ENST00000468963 ASAP3Q8TDY4 903 aa16.48■□□□□ 0.23
SDCCAG3-209ENST00000468963 SLC22A17Q8WUG5 538 aa16.48■□□□□ 0.23
SDCCAG3-209ENST00000468963 AUTS2Q8WXX7 1259 aa16.48■□□□□ 0.23
SDCCAG3-209ENST00000468963 ADAM7Q9H2U9 754 aa16.48■□□□□ 0.23
SDCCAG3-209ENST00000468963 RSAD1Q9HA92 442 aa16.48■□□□□ 0.23
SDCCAG3-209ENST00000468963 KANSL3Q9P2N6 904 aa16.48■□□□□ 0.23
SDCCAG3-209ENST00000468963 MYO10Q9HD67 2058 aa16.48■□□□□ 0.23
SDCCAG3-209ENST00000468963 TSPAN1O60635 241 aa16.47■□□□□ 0.23
SDCCAG3-209ENST00000468963 LILRB3O75022 631 aa16.47■□□□□ 0.23
SDCCAG3-209ENST00000468963 SPATA31C1P0DKV0 1188 aa16.47■□□□□ 0.23
SDCCAG3-209ENST00000468963 RARRES1P49788 294 aa16.47■□□□□ 0.23
SDCCAG3-209ENST00000468963 GIT2Q14161 759 aa16.47■□□□□ 0.23
SDCCAG3-209ENST00000468963 AMHR2Q16671 573 aa16.47■□□□□ 0.23
SDCCAG3-209ENST00000468963 TPRNQ4KMQ1 711 aa16.47■□□□□ 0.23
SDCCAG3-209ENST00000468963 TRIM67Q6ZTA4 783 aa16.47■□□□□ 0.23
SDCCAG3-209ENST00000468963 URGCPQ8TCY9 931 aa16.47■□□□□ 0.23
SDCCAG3-209ENST00000468963 EIF2AQ9BY44 585 aaKnown RBP16.47■□□□□ 0.23
SDCCAG3-209ENST00000468963 GBP3Q9H0R5 595 aa16.47■□□□□ 0.23
SDCCAG3-209ENST00000468963 RNF39Q9H2S5 420 aa16.47■□□□□ 0.23
SDCCAG3-209ENST00000468963 LIMCH1Q9UPQ0 1083 aa16.47■□□□□ 0.23
SDCCAG3-209ENST00000468963 INPPL1O15357 1258 aa16.46■□□□□ 0.23
SDCCAG3-209ENST00000468963 GLRA2P23416 452 aa16.46■□□□□ 0.23
SDCCAG3-209ENST00000468963 MBTD1Q05BQ5 628 aa16.46■□□□□ 0.23
SDCCAG3-209ENST00000468963 ITIH3Q06033 890 aa16.46■□□□□ 0.23
SDCCAG3-209ENST00000468963 CAPSQ13938 189 aa16.46■□□□□ 0.23
SDCCAG3-209ENST00000468963 PIGOQ8TEQ8 1089 aa16.46■□□□□ 0.23
SDCCAG3-209ENST00000468963 CCDC51Q96ER9 411 aa16.46■□□□□ 0.23
SDCCAG3-209ENST00000468963 MFSD14AQ96MC6 490 aa16.46■□□□□ 0.23
SDCCAG3-209ENST00000468963 TMEM175Q9BSA9 504 aa16.46■□□□□ 0.23
SDCCAG3-209ENST00000468963 NFKBIZQ9BYH8 718 aa16.46■□□□□ 0.23
SDCCAG3-209ENST00000468963 CSRNP2Q9H175 543 aa16.46■□□□□ 0.23
SDCCAG3-209ENST00000468963 UBN1Q9NPG3 1134 aa16.46■□□□□ 0.23
SDCCAG3-209ENST00000468963 MIOSQ9NXC5 875 aa16.46■□□□□ 0.23
SDCCAG3-209ENST00000468963 CDH22Q9UJ99 828 aa16.46■□□□□ 0.23
SDCCAG3-209ENST00000468963 FAN1Q9Y2M0 1017 aa16.46■□□□□ 0.23
SDCCAG3-209ENST00000468963 IPPQ9Y573 584 aa16.46■□□□□ 0.23
SDCCAG3-209ENST00000468963 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.45■□□□□ 0.22
SDCCAG3-209ENST00000468963 TMEM221A6NGB7 291 aa16.45■□□□□ 0.22
SDCCAG3-209ENST00000468963 INO80B-WBP1J3KQ70 363 aa16.45■□□□□ 0.22
SDCCAG3-209ENST00000468963 M0R296 226 aa16.45■□□□□ 0.22
SDCCAG3-209ENST00000468963 NRP1O14786 923 aa16.45■□□□□ 0.22
SDCCAG3-209ENST00000468963 ERLIN2O94905 339 aa16.45■□□□□ 0.22
SDCCAG3-209ENST00000468963 POMCP01189 267 aa16.45■□□□□ 0.22
SDCCAG3-209ENST00000468963 ITGA4P13612 1032 aa16.45■□□□□ 0.22
SDCCAG3-209ENST00000468963 EPCAMP16422 314 aa16.45■□□□□ 0.22
SDCCAG3-209ENST00000468963 GUCY1B3Q02153 619 aa16.45■□□□□ 0.22
SDCCAG3-209ENST00000468963 TFDP1Q14186 410 aa16.45■□□□□ 0.22
SDCCAG3-209ENST00000468963 KANK3Q6NY19 840 aa16.45■□□□□ 0.22
SDCCAG3-209ENST00000468963 NOTUMQ6P988 496 aa16.45■□□□□ 0.22
SDCCAG3-209ENST00000468963 CATSPER3Q86XQ3 398 aa16.45■□□□□ 0.22
SDCCAG3-209ENST00000468963 C12orf76Q8N812 135 aaPredicted RBP16.45■□□□□ 0.22
SDCCAG3-209ENST00000468963 CPB2Q96IY4 423 aa16.45■□□□□ 0.22
SDCCAG3-209ENST00000468963 FAM193BQ96PV7 902 aaPredicted RBP16.45■□□□□ 0.22
SDCCAG3-209ENST00000468963 LLPHQ9BRT6 129 aaKnown RBP16.45■□□□□ 0.22
SDCCAG3-209ENST00000468963 KCNH6Q9H252 994 aa16.45■□□□□ 0.22
SDCCAG3-209ENST00000468963 ARID2Q68CP9 1835 aa16.45■□□□□ 0.22
SDCCAG3-209ENST00000468963 ARL5CA6NH57 179 aa16.44■□□□□ 0.22
SDCCAG3-209ENST00000468963 POTEMA6NI47 508 aa16.44■□□□□ 0.22
SDCCAG3-209ENST00000468963 EFEMP2O95967 443 aa16.44■□□□□ 0.22
SDCCAG3-209ENST00000468963 ARF4P18085 180 aaPredicted RBP16.44■□□□□ 0.22
SDCCAG3-209ENST00000468963 ATP2B1P20020 1258 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms