RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 MORC3Q14149 939 aa8.92□□□□□ -0.98
HDAC6-216ENST00000468949 HSP90AA2PQ14568 343 aaPredicted RBP8.92□□□□□ -0.98
HDAC6-216ENST00000468949 PCBP1Q15365 356 aaKnown RBP eCLIP8.92□□□□□ -0.98
HDAC6-216ENST00000468949 CDCA2Q69YH5 1023 aaPredicted RBP8.92□□□□□ -0.98
HDAC6-216ENST00000468949 RBM43Q6ZSC3 357 aaKnown RBP8.92□□□□□ -0.98
HDAC6-216ENST00000468949 LRRC8DQ7L1W4 858 aa8.92□□□□□ -0.98
HDAC6-216ENST00000468949 CATSPER4Q7RTX7 472 aa8.92□□□□□ -0.98
HDAC6-216ENST00000468949 SRGAP1Q7Z6B7 1085 aa8.92□□□□□ -0.98
HDAC6-216ENST00000468949 KSR1Q8IVT5 923 aa8.92□□□□□ -0.98
HDAC6-216ENST00000468949 NELFCDQ8IXH7 590 aa8.92□□□□□ -0.98
HDAC6-216ENST00000468949 SMYD4Q8IYR2 804 aaPredicted RBP8.92□□□□□ -0.98
HDAC6-216ENST00000468949 TDHQ8IZJ6 230 aa8.92□□□□□ -0.98
HDAC6-216ENST00000468949 LINC01465Q8N7H1 131 aa8.92□□□□□ -0.98
HDAC6-216ENST00000468949 SPATA20Q8TB22 786 aa8.92□□□□□ -0.98
HDAC6-216ENST00000468949 GOLGA5Q8TBA6 731 aa8.92□□□□□ -0.98
HDAC6-216ENST00000468949 BSNDQ8WZ55 320 aa8.92□□□□□ -0.98
HDAC6-216ENST00000468949 HPS3Q969F9 1004 aa8.92□□□□□ -0.98
HDAC6-216ENST00000468949 TOX2Q96NM4 488 aa8.92□□□□□ -0.98
HDAC6-216ENST00000468949 FDXACB1Q9BRP7 624 aaPredicted RBP8.92□□□□□ -0.98
HDAC6-216ENST00000468949 MRPL4Q9BYD3 311 aaKnown RBP8.92□□□□□ -0.98
HDAC6-216ENST00000468949 CELF4Q9BZC1 486 aaKnown RBP8.92□□□□□ -0.98
HDAC6-216ENST00000468949 PPP1R12CQ9BZL4 782 aa8.92□□□□□ -0.98
HDAC6-216ENST00000468949 TSPY26PQ9H489 355 aa8.92□□□□□ -0.98
HDAC6-216ENST00000468949 PRMT7Q9NVM4 692 aaPredicted RBP8.92□□□□□ -0.98
HDAC6-216ENST00000468949 CTNND2Q9UQB3 1225 aa8.92□□□□□ -0.98
HDAC6-216ENST00000468949 MAPK8IP1Q9UQF2 711 aa8.92□□□□□ -0.98
HDAC6-216ENST00000468949 WDR81Q562E7 1941 aa8.92□□□□□ -0.98
HDAC6-216ENST00000468949 TRIOBPQ9H2D6 2365 aa8.91□□□□□ -0.98
HDAC6-216ENST00000468949 BECN2A8MW95 431 aa8.91□□□□□ -0.98
HDAC6-216ENST00000468949 TULP1O00294 542 aaPredicted RBP8.91□□□□□ -0.98
HDAC6-216ENST00000468949 KIAA0355O15063 1070 aa8.91□□□□□ -0.98
HDAC6-216ENST00000468949 CALUO43852 315 aaPredicted RBP8.91□□□□□ -0.98
HDAC6-216ENST00000468949 RPS6KA5O75582 802 aa8.91□□□□□ -0.98
HDAC6-216ENST00000468949 PRPF6O94906 941 aaKnown RBP8.91□□□□□ -0.98
HDAC6-216ENST00000468949 PARNO95453 639 aaKnown RBP8.91□□□□□ -0.98
HDAC6-216ENST00000468949 CKBP12277 381 aa8.91□□□□□ -0.98
HDAC6-216ENST00000468949 SELPP16109 830 aa8.91□□□□□ -0.98
HDAC6-216ENST00000468949 CDK7P50613 346 aa8.91□□□□□ -0.98
HDAC6-216ENST00000468949 PTENP60484 403 aa8.91□□□□□ -0.98
HDAC6-216ENST00000468949 POU5F1BQ06416 359 aa8.91□□□□□ -0.98
HDAC6-216ENST00000468949 STK4Q13043 487 aa8.91□□□□□ -0.98
HDAC6-216ENST00000468949 PAK1Q13153 545 aa8.91□□□□□ -0.98
HDAC6-216ENST00000468949 PRPF4BQ13523 1007 aaKnown RBP8.91□□□□□ -0.98
HDAC6-216ENST00000468949 HIC1Q14526 733 aa8.91□□□□□ -0.98
HDAC6-216ENST00000468949 DPCR1Q3MIW9 517 aa8.91□□□□□ -0.98
HDAC6-216ENST00000468949 ZNF720Q7Z2F6 126 aa8.91□□□□□ -0.98
HDAC6-216ENST00000468949 RPAINQ86UA6 219 aa8.91□□□□□ -0.98
HDAC6-216ENST00000468949 GUF1Q8N442 669 aaKnown RBP8.91□□□□□ -0.98
HDAC6-216ENST00000468949 KIAA0895Q8NCT3 520 aa8.91□□□□□ -0.98
HDAC6-216ENST00000468949 TMEM161BQ8NDZ6 487 aa8.91□□□□□ -0.98
HDAC6-216ENST00000468949 NOC3LQ8WTT2 800 aaKnown RBP8.91□□□□□ -0.98
HDAC6-216ENST00000468949 PRIMPOLQ96LW4 560 aa8.91□□□□□ -0.98
HDAC6-216ENST00000468949 ADPGKQ9BRR6 497 aa8.91□□□□□ -0.98
HDAC6-216ENST00000468949 NFKBIZQ9BYH8 718 aa8.91□□□□□ -0.98
HDAC6-216ENST00000468949 ST6GALNAC4Q9H4F1 302 aa8.91□□□□□ -0.98
HDAC6-216ENST00000468949 TMEM134Q9H6X4 195 aa8.91□□□□□ -0.98
HDAC6-216ENST00000468949 ARHGAP28Q9P2N2 729 aa8.91□□□□□ -0.98
HDAC6-216ENST00000468949 ANKFY1Q9P2R3 1169 aa8.91□□□□□ -0.98
HDAC6-216ENST00000468949 TBX21Q9UL17 535 aa8.91□□□□□ -0.98
HDAC6-216ENST00000468949 TBX20Q9UMR3 447 aa8.91□□□□□ -0.98
HDAC6-216ENST00000468949 KAT6AQ92794 2004 aa8.91□□□□□ -0.98
HDAC6-216ENST00000468949 ADGRA3Q8IWK6 1321 aa8.9□□□□□ -0.98
HDAC6-216ENST00000468949 TRIM43BA6NCK2 446 aa8.9□□□□□ -0.98
HDAC6-216ENST00000468949 GPR182O15218 404 aa8.9□□□□□ -0.98
HDAC6-216ENST00000468949 GPR32O75388 356 aa8.9□□□□□ -0.98
HDAC6-216ENST00000468949 FGFR1OPO95684 399 aaKnown RBP8.9□□□□□ -0.98
HDAC6-216ENST00000468949 CAVIN2O95810 425 aa8.9□□□□□ -0.98
HDAC6-216ENST00000468949 CD4P01730 458 aa8.9□□□□□ -0.98
HDAC6-216ENST00000468949 GHRP10912 638 aa8.9□□□□□ -0.98
HDAC6-216ENST00000468949 DARSP14868 501 aaKnown RBP8.9□□□□□ -0.98
HDAC6-216ENST00000468949 RAG1P15918 1043 aa8.9□□□□□ -0.98
HDAC6-216ENST00000468949 EIF4BP23588 611 aaKnown RBP8.9□□□□□ -0.98
HDAC6-216ENST00000468949 PRCPP42785 496 aa8.9□□□□□ -0.98
HDAC6-216ENST00000468949 CASP5P51878 434 aa8.9□□□□□ -0.98
HDAC6-216ENST00000468949 GTF2BQ00403 316 aa8.9□□□□□ -0.98
HDAC6-216ENST00000468949 MBTD1Q05BQ5 628 aa8.9□□□□□ -0.98
HDAC6-216ENST00000468949 EHHADHQ08426 723 aa8.9□□□□□ -0.98
HDAC6-216ENST00000468949 FAAP100Q0VG06 881 aa8.9□□□□□ -0.98
HDAC6-216ENST00000468949 NFX1Q12986 1120 aaKnown RBP8.9□□□□□ -0.98
HDAC6-216ENST00000468949 KNOP1Q1ED39 458 aaKnown RBP8.9□□□□□ -0.98
HDAC6-216ENST00000468949 ANO6Q4KMQ2 910 aa8.9□□□□□ -0.98
HDAC6-216ENST00000468949 ZC2HC1CQ53FD0 456 aaPredicted RBP8.9□□□□□ -0.98
HDAC6-216ENST00000468949 ZNF618Q5T7W0 954 aa8.9□□□□□ -0.98
HDAC6-216ENST00000468949 ARMCX5Q6P1M9 558 aa8.9□□□□□ -0.98
HDAC6-216ENST00000468949 NOTUMQ6P988 496 aa8.9□□□□□ -0.98
HDAC6-216ENST00000468949 LRSAM1Q6UWE0 723 aa8.9□□□□□ -0.98
HDAC6-216ENST00000468949 TSHZ1Q6ZSZ6 1077 aa8.9□□□□□ -0.98
HDAC6-216ENST00000468949 MAP4K3Q8IVH8 894 aa8.9□□□□□ -0.98
HDAC6-216ENST00000468949 USP38Q8NB14 1042 aa8.9□□□□□ -0.98
HDAC6-216ENST00000468949 NELFBQ8WX92 580 aa8.9□□□□□ -0.98
HDAC6-216ENST00000468949 DHX38Q92620 1227 aaKnown RBP8.9□□□□□ -0.98
HDAC6-216ENST00000468949 TRIM43Q96BQ3 446 aaPredicted RBP8.9□□□□□ -0.98
HDAC6-216ENST00000468949 DHTKD1Q96HY7 919 aaPredicted RBP8.9□□□□□ -0.98
HDAC6-216ENST00000468949 NTPCRQ9BSD7 190 aaKnown RBP8.9□□□□□ -0.98
HDAC6-216ENST00000468949 TCHPQ9BT92 498 aa8.9□□□□□ -0.98
HDAC6-216ENST00000468949 TRIM6Q9C030 488 aaPredicted RBP8.9□□□□□ -0.98
HDAC6-216ENST00000468949 GBP3Q9H0R5 595 aa8.9□□□□□ -0.98
HDAC6-216ENST00000468949 DNAJC25Q9H1X3 360 aa8.9□□□□□ -0.98
HDAC6-216ENST00000468949 ADAMTS10Q9H324 1103 aa8.9□□□□□ -0.98
HDAC6-216ENST00000468949 TYW1Q9NV66 732 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms