RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 KCND1Q9NSA2 647 aa9.04□□□□□ -0.96
BRCA1-208ENST00000468300 SPTLC3Q9NUV7 552 aa9.04□□□□□ -0.96
BRCA1-208ENST00000468300 WDR70Q9NW82 654 aa9.04□□□□□ -0.96
BRCA1-208ENST00000468300 CAPN11Q9UMQ6 739 aa9.04□□□□□ -0.96
BRCA1-208ENST00000468300 ANK1P16157 1881 aa9.04□□□□□ -0.96
BRCA1-208ENST00000468300 USP27XA6NNY8 438 aa9.03□□□□□ -0.96
BRCA1-208ENST00000468300 H3BRB1 525 aa9.03□□□□□ -0.96
BRCA1-208ENST00000468300 HAS3O00219 553 aa9.03□□□□□ -0.96
BRCA1-208ENST00000468300 DYNC1LI2O43237 492 aaPredicted RBP9.03□□□□□ -0.96
BRCA1-208ENST00000468300 FAM189A1O60320 539 aa9.03□□□□□ -0.96
BRCA1-208ENST00000468300 F2P00734 622 aa9.03□□□□□ -0.96
BRCA1-208ENST00000468300 ADRB2P07550 413 aa9.03□□□□□ -0.96
BRCA1-208ENST00000468300 SKILP12757 684 aa9.03□□□□□ -0.96
BRCA1-208ENST00000468300 YY1P25490 414 aa9.03□□□□□ -0.96
BRCA1-208ENST00000468300 WNT7BP56706 349 aa9.03□□□□□ -0.96
BRCA1-208ENST00000468300 NKX3-2P78367 333 aa9.03□□□□□ -0.96
BRCA1-208ENST00000468300 LAMTOR4Q0VGL1 99 aa9.03□□□□□ -0.96
BRCA1-208ENST00000468300 KCNH2Q12809 1159 aa9.03□□□□□ -0.96
BRCA1-208ENST00000468300 FIGNQ5HY92 759 aa9.03□□□□□ -0.96
BRCA1-208ENST00000468300 ZFYVE27Q5T4F4 411 aa9.03□□□□□ -0.96
BRCA1-208ENST00000468300 E4F1Q66K89 784 aaPredicted RBP9.03□□□□□ -0.96
BRCA1-208ENST00000468300 REM2Q8IYK8 340 aaPredicted RBP9.03□□□□□ -0.96
BRCA1-208ENST00000468300 SLC17A8Q8NDX2 589 aa9.03□□□□□ -0.96
BRCA1-208ENST00000468300 PPP1R13LQ8WUF5 828 aa9.03□□□□□ -0.96
BRCA1-208ENST00000468300 PANX2Q96RD6 677 aa9.03□□□□□ -0.96
BRCA1-208ENST00000468300 TUT1Q9H6E5 874 aaKnown RBP9.03□□□□□ -0.96
BRCA1-208ENST00000468300 SIX2Q9NPC8 291 aa9.03□□□□□ -0.96
BRCA1-208ENST00000468300 HSPBP1Q9NZL4 362 aa9.03□□□□□ -0.96
BRCA1-208ENST00000468300 Q9Y3F1 56 aa9.03□□□□□ -0.96
BRCA1-208ENST00000468300 AKR1B15C9JRZ8 316 aaPredicted RBP9.03□□□□□ -0.96
BRCA1-208ENST00000468300 ADCY3O60266 1144 aa9.03□□□□□ -0.96
BRCA1-208ENST00000468300 MSCO60682 206 aa9.03□□□□□ -0.96
BRCA1-208ENST00000468300 CYP2J2P51589 502 aa9.03□□□□□ -0.96
BRCA1-208ENST00000468300 SNRPFP62306 86 aaKnown RBP9.03□□□□□ -0.96
BRCA1-208ENST00000468300 CCDC40Q4G0X9 1142 aa9.03□□□□□ -0.96
BRCA1-208ENST00000468300 IER5Q5VY09 327 aa9.03□□□□□ -0.96
BRCA1-208ENST00000468300 STXBP4Q6ZWJ1 553 aa9.03□□□□□ -0.96
BRCA1-208ENST00000468300 ANKRD20A12PQ8NF67 263 aa9.03□□□□□ -0.96
BRCA1-208ENST00000468300 BAP1Q92560 729 aa9.03□□□□□ -0.96
BRCA1-208ENST00000468300 DNAJC7Q99615 494 aa9.03□□□□□ -0.96
BRCA1-208ENST00000468300 TMEM134Q9H6X4 195 aa9.03□□□□□ -0.96
BRCA1-208ENST00000468300 MINDY3Q9H8M7 445 aa9.03□□□□□ -0.96
BRCA1-208ENST00000468300 IFT122Q9HBG6 1241 aa9.03□□□□□ -0.96
BRCA1-208ENST00000468300 ABHD10Q9NUJ1 306 aa9.03□□□□□ -0.96
BRCA1-208ENST00000468300 COL1A2P08123 1366 aa9.02□□□□□ -0.96
BRCA1-208ENST00000468300 SFPQP23246 707 aaKnown RBP eCLIP9.02□□□□□ -0.96
BRCA1-208ENST00000468300 RPL13P26373 211 aaKnown RBP9.02□□□□□ -0.96
BRCA1-208ENST00000468300 HOXC8P31273 242 aa9.02□□□□□ -0.96
BRCA1-208ENST00000468300 PSMC2P35998 433 aaKnown RBP9.02□□□□□ -0.96
BRCA1-208ENST00000468300 CLCN3P51790 818 aa9.02□□□□□ -0.96
BRCA1-208ENST00000468300 SMTNP53814 917 aa9.02□□□□□ -0.96
BRCA1-208ENST00000468300 DGKDQ16760 1214 aa9.02□□□□□ -0.96
BRCA1-208ENST00000468300 CBWD6Q4V339 395 aa9.02□□□□□ -0.96
BRCA1-208ENST00000468300 CBWD3Q5JTY5 395 aa9.02□□□□□ -0.96
BRCA1-208ENST00000468300 ZNF484Q5JVG2 852 aa9.02□□□□□ -0.96
BRCA1-208ENST00000468300 CBWD5Q5RIA9 395 aa9.02□□□□□ -0.96
BRCA1-208ENST00000468300 EFCAB12Q6NXP0 572 aa9.02□□□□□ -0.96
BRCA1-208ENST00000468300 MTHFD1LQ6UB35 978 aa9.02□□□□□ -0.96
BRCA1-208ENST00000468300 CRELD2Q6UXH1 353 aaPredicted RBP9.02□□□□□ -0.96
BRCA1-208ENST00000468300 LMO3Q8TAP4 145 aa9.02□□□□□ -0.96
BRCA1-208ENST00000468300 CPLX3Q8WVH0 158 aa9.02□□□□□ -0.96
BRCA1-208ENST00000468300 CGNQ9P2M7 1197 aaKnown RBP9.02□□□□□ -0.96
BRCA1-208ENST00000468300 ARMCX3Q9UH62 379 aaPredicted RBP9.02□□□□□ -0.96
BRCA1-208ENST00000468300 AJAP1Q9UKB5 411 aaPredicted RBP9.02□□□□□ -0.96
BRCA1-208ENST00000468300 TRPC6Q9Y210 931 aa9.02□□□□□ -0.96
BRCA1-208ENST00000468300 TRIP12Q14669 1992 aaPredicted RBP9.02□□□□□ -0.97
BRCA1-208ENST00000468300 SCN10AQ9Y5Y9 1956 aa9.02□□□□□ -0.97
BRCA1-208ENST00000468300 A0A1W2PQJ5 194 aa9.02□□□□□ -0.97
BRCA1-208ENST00000468300 NRDCO43847 1150 aa9.02□□□□□ -0.97
BRCA1-208ENST00000468300 SH3BP5O60239 455 aa9.02□□□□□ -0.97
BRCA1-208ENST00000468300 KLRC1P26715 233 aa9.02□□□□□ -0.97
BRCA1-208ENST00000468300 BEX3Q00994 111 aa9.02□□□□□ -0.97
BRCA1-208ENST00000468300 SP3Q02447 781 aa9.02□□□□□ -0.97
BRCA1-208ENST00000468300 CACNB2Q08289 660 aaPredicted RBP9.02□□□□□ -0.97
BRCA1-208ENST00000468300 MTF1Q14872 753 aa9.02□□□□□ -0.97
BRCA1-208ENST00000468300 BRDTQ58F21 947 aaPredicted RBP9.02□□□□□ -0.97
BRCA1-208ENST00000468300 FAM186BQ8IYM0 893 aa9.02□□□□□ -0.97
BRCA1-208ENST00000468300 GOLGA5Q8TBA6 731 aa9.02□□□□□ -0.97
BRCA1-208ENST00000468300 ZBTB45Q96K62 511 aaPredicted RBP9.02□□□□□ -0.97
BRCA1-208ENST00000468300 TRAIPQ9BWF2 469 aa9.02□□□□□ -0.97
BRCA1-208ENST00000468300 GANQ9H2C0 597 aa9.02□□□□□ -0.97
BRCA1-208ENST00000468300 FAM184BQ9ULE4 1060 aa9.02□□□□□ -0.97
BRCA1-208ENST00000468300 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.02□□□□□ -0.97
BRCA1-208ENST00000468300 MAPK13O15264 365 aa9.02□□□□□ -0.97
BRCA1-208ENST00000468300 GAS2O43903 313 aaKnown RBP9.02□□□□□ -0.97
BRCA1-208ENST00000468300 LRRN2O75325 713 aa9.02□□□□□ -0.97
BRCA1-208ENST00000468300 TRPA1O75762 1119 aa9.02□□□□□ -0.97
BRCA1-208ENST00000468300 MAP2K2P36507 400 aa9.02□□□□□ -0.97
BRCA1-208ENST00000468300 RAD9BQ6WBX8 426 aa9.02□□□□□ -0.97
BRCA1-208ENST00000468300 CBWD2Q8IUF1 395 aa9.02□□□□□ -0.97
BRCA1-208ENST00000468300 SYCP3Q8IZU3 236 aa9.02□□□□□ -0.97
BRCA1-208ENST00000468300 IFT74Q96LB3 600 aa9.02□□□□□ -0.97
BRCA1-208ENST00000468300 UPF3AQ9H1J1 476 aaKnown RBP9.02□□□□□ -0.97
BRCA1-208ENST00000468300 SUGCTQ9HAC7 445 aa9.02□□□□□ -0.97
BRCA1-208ENST00000468300 SUCLA2Q9P2R7 463 aaPredicted RBP9.02□□□□□ -0.97
BRCA1-208ENST00000468300 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.02□□□□□ -0.974e-6■■□□□ 13.9
BRCA1-208ENST00000468300 MBLAC1A4D2B0 266 aaPredicted RBP9.01□□□□□ -0.97
BRCA1-208ENST00000468300 KCNJ6P48051 423 aa9.01□□□□□ -0.97
BRCA1-208ENST00000468300 PPP3CAQ08209 521 aa9.01□□□□□ -0.97
BRCA1-208ENST00000468300 MEA1Q16626 185 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms