RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 PCDHB12Q9Y5F1 795 aa16.79■□□□□ 0.28
ATG4B-215ENST00000468018 MUC3AQ02505 3323 aa16.78■□□□□ 0.28
ATG4B-215ENST00000468018 CNTNAP2Q9UHC6 1331 aa16.78■□□□□ 0.28
ATG4B-215ENST00000468018 LRRIQ4A6NIV6 560 aa16.78■□□□□ 0.28
ATG4B-215ENST00000468018 B4GALT5O43286 388 aa16.78■□□□□ 0.28
ATG4B-215ENST00000468018 EDN1P05305 212 aa16.78■□□□□ 0.28
ATG4B-215ENST00000468018 LONP1P36776 959 aaKnown RBP16.78■□□□□ 0.28
ATG4B-215ENST00000468018 PPP2R5AQ15172 486 aa16.78■□□□□ 0.28
ATG4B-215ENST00000468018 TCEAL5Q5H9L2 206 aa16.78■□□□□ 0.28
ATG4B-215ENST00000468018 TJAP1Q5JTD0 557 aa16.78■□□□□ 0.28
ATG4B-215ENST00000468018 KCNT2Q6UVM3 1135 aa16.78■□□□□ 0.28
ATG4B-215ENST00000468018 SYT2Q8N9I0 419 aaPredicted RBP16.78■□□□□ 0.28
ATG4B-215ENST00000468018 RNF169Q8NCN4 708 aa16.78■□□□□ 0.28
ATG4B-215ENST00000468018 CNNM3Q8NE01 707 aa16.78■□□□□ 0.28
ATG4B-215ENST00000468018 POF1BQ8WVV4 589 aa16.78■□□□□ 0.28
ATG4B-215ENST00000468018 PGBD4Q96DM1 585 aa16.78■□□□□ 0.28
ATG4B-215ENST00000468018 CPB2Q96IY4 423 aa16.78■□□□□ 0.28
ATG4B-215ENST00000468018 ASB2Q96Q27 587 aa16.78■□□□□ 0.28
ATG4B-215ENST00000468018 RUSC1Q9BVN2 902 aa16.78■□□□□ 0.28
ATG4B-215ENST00000468018 EIF2AQ9BY44 585 aaKnown RBP16.78■□□□□ 0.28
ATG4B-215ENST00000468018 C2orf40Q9H1Z8 148 aa16.78■□□□□ 0.28
ATG4B-215ENST00000468018 FOXD4L1Q9NU39 408 aa16.78■□□□□ 0.28
ATG4B-215ENST00000468018 PRMT7Q9NVM4 692 aaPredicted RBP16.78■□□□□ 0.28
ATG4B-215ENST00000468018 IPPQ9Y573 584 aa16.78■□□□□ 0.28
ATG4B-215ENST00000468018 CLIC4Q9Y696 253 aa16.78■□□□□ 0.28
ATG4B-215ENST00000468018 TTLL13PA6NNM8 815 aa16.77■□□□□ 0.28
ATG4B-215ENST00000468018 FGF18O76093 207 aa16.77■□□□□ 0.28
ATG4B-215ENST00000468018 GUCY2CP25092 1073 aa16.77■□□□□ 0.28
ATG4B-215ENST00000468018 SLC12A3P55017 1021 aa16.77■□□□□ 0.28
ATG4B-215ENST00000468018 MRPS5P82675 430 aaKnown RBP16.77■□□□□ 0.28
ATG4B-215ENST00000468018 FAM173BQ6P4H8 233 aa16.77■□□□□ 0.28
ATG4B-215ENST00000468018 CABP7Q86V35 215 aa16.77■□□□□ 0.28
ATG4B-215ENST00000468018 HSCBQ8IWL3 235 aa16.77■□□□□ 0.28
ATG4B-215ENST00000468018 HLA-CQ95604 372 aa16.77■□□□□ 0.28
ATG4B-215ENST00000468018 TIPINQ9BVW5 301 aa16.77■□□□□ 0.28
ATG4B-215ENST00000468018 COL25A1Q9BXS0 654 aaPredicted RBP16.77■□□□□ 0.28
ATG4B-215ENST00000468018 ZSCAN16Q9H4T2 348 aaPredicted RBP16.77■□□□□ 0.28
ATG4B-215ENST00000468018 RSAD1Q9HA92 442 aa16.77■□□□□ 0.28
ATG4B-215ENST00000468018 TBC1D13Q9NVG8 400 aa16.77■□□□□ 0.28
ATG4B-215ENST00000468018 LZTS1Q9Y250 596 aa16.77■□□□□ 0.28
ATG4B-215ENST00000468018 CITO14578 2027 aa16.77■□□□□ 0.27
ATG4B-215ENST00000468018 ZMYM2Q9UBW7 1377 aa16.77■□□□□ 0.27
ATG4B-215ENST00000468018 TTC28Q96AY4 2481 aa16.76■□□□□ 0.27
ATG4B-215ENST00000468018 FSCN2O14926 492 aa16.76■□□□□ 0.27
ATG4B-215ENST00000468018 B4GALT3O60512 393 aa16.76■□□□□ 0.27
ATG4B-215ENST00000468018 IRS1P35568 1242 aa16.76■□□□□ 0.27
ATG4B-215ENST00000468018 AFF1P51825 1210 aaKnown RBP16.76■□□□□ 0.27
ATG4B-215ENST00000468018 TFF2Q03403 129 aa16.76■□□□□ 0.27
ATG4B-215ENST00000468018 CTC1Q2NKJ3 1217 aa16.76■□□□□ 0.27
ATG4B-215ENST00000468018 NOMO2Q5JPE7 1267 aa16.76■□□□□ 0.27
ATG4B-215ENST00000468018 GLB1LQ6UWU2 654 aa16.76■□□□□ 0.27
ATG4B-215ENST00000468018 ZBTB8OSQ8IWT0 167 aa16.76■□□□□ 0.27
ATG4B-215ENST00000468018 SLC39A11Q8N1S5 342 aa16.76■□□□□ 0.27
ATG4B-215ENST00000468018 KCNN1Q92952 543 aa16.76■□□□□ 0.27
ATG4B-215ENST00000468018 PABPC5Q96DU9 382 aaKnown RBP16.76■□□□□ 0.27
ATG4B-215ENST00000468018 ZNF558Q96NG5 402 aa16.76■□□□□ 0.27
ATG4B-215ENST00000468018 CCSER1Q9C0I3 900 aa16.76■□□□□ 0.27
ATG4B-215ENST00000468018 C17orf75Q9HAS0 396 aa16.76■□□□□ 0.27
ATG4B-215ENST00000468018 POLD4Q9HCU8 107 aa16.76■□□□□ 0.27
ATG4B-215ENST00000468018 BLOC1S4Q9NUP1 217 aa16.76■□□□□ 0.27
ATG4B-215ENST00000468018 KCND2Q9NZV8 630 aa16.76■□□□□ 0.27
ATG4B-215ENST00000468018 FBXO2Q9UK22 296 aaPredicted RBP16.76■□□□□ 0.27
ATG4B-215ENST00000468018 PDCD11Q14690 1871 aaKnown RBP16.76■□□□□ 0.27
ATG4B-215ENST00000468018 CUL9Q8IWT3 2517 aa16.75■□□□□ 0.27
ATG4B-215ENST00000468018 ACKR2O00590 384 aa16.75■□□□□ 0.27
ATG4B-215ENST00000468018 HIP1RO75146 1068 aa16.75■□□□□ 0.27
ATG4B-215ENST00000468018 BMP1P13497 986 aa16.75■□□□□ 0.27
ATG4B-215ENST00000468018 PPM1AP35813 382 aa16.75■□□□□ 0.27
ATG4B-215ENST00000468018 NASPP49321 788 aaPredicted RBP16.75■□□□□ 0.27
ATG4B-215ENST00000468018 NCBP1Q09161 790 aaKnown RBP16.75■□□□□ 0.27
ATG4B-215ENST00000468018 SKIV2LQ15477 1246 aaKnown RBP16.75■□□□□ 0.27
ATG4B-215ENST00000468018 SPOUT1Q5T280 376 aaKnown RBP16.75■□□□□ 0.27
ATG4B-215ENST00000468018 SLC27A1Q6PCB7 646 aa16.75■□□□□ 0.27
ATG4B-215ENST00000468018 MRPS27Q92552 414 aaKnown RBP16.75■□□□□ 0.27
ATG4B-215ENST00000468018 USP28Q96RU2 1077 aa16.75■□□□□ 0.27
ATG4B-215ENST00000468018 NTPCRQ9BSD7 190 aaKnown RBP16.75■□□□□ 0.27
ATG4B-215ENST00000468018 KIFC3Q9BVG8 833 aa16.75■□□□□ 0.27
ATG4B-215ENST00000468018 RNF39Q9H2S5 420 aa16.75■□□□□ 0.27
ATG4B-215ENST00000468018 NRDE2Q9H7Z3 1164 aa16.75■□□□□ 0.27
ATG4B-215ENST00000468018 UBE2ZQ9H832 354 aaPredicted RBP16.75■□□□□ 0.27
ATG4B-215ENST00000468018 ARHGAP28Q9P2N2 729 aa16.75■□□□□ 0.27
ATG4B-215ENST00000468018 DAXXQ9UER7 740 aaPredicted RBP16.75■□□□□ 0.27
ATG4B-215ENST00000468018 SRPRBQ9Y5M8 271 aaKnown RBP16.75■□□□□ 0.27
ATG4B-215ENST00000468018 CARNS1A5YM72 827 aa16.74■□□□□ 0.27
ATG4B-215ENST00000468018 PRKCBP05771 671 aa16.74■□□□□ 0.27
ATG4B-215ENST00000468018 PLA2G4BP0C869 781 aa16.74■□□□□ 0.27
ATG4B-215ENST00000468018 PDIA4P13667 645 aaKnown RBP16.74■□□□□ 0.27
ATG4B-215ENST00000468018 LTBRP36941 435 aa16.74■□□□□ 0.27
ATG4B-215ENST00000468018 PBX3P40426 434 aa16.74■□□□□ 0.27
ATG4B-215ENST00000468018 UBA7P41226 1012 aa16.74■□□□□ 0.27
ATG4B-215ENST00000468018 NPTX2P47972 431 aa16.74■□□□□ 0.27
ATG4B-215ENST00000468018 EFNA5P52803 228 aa16.74■□□□□ 0.27
ATG4B-215ENST00000468018 HYAL1Q12794 435 aa16.74■□□□□ 0.27
ATG4B-215ENST00000468018 MAPK6Q16659 721 aa16.74■□□□□ 0.27
ATG4B-215ENST00000468018 AAK1Q2M2I8 961 aa16.74■□□□□ 0.27
ATG4B-215ENST00000468018 LONRF3Q496Y0 759 aa16.74■□□□□ 0.27
ATG4B-215ENST00000468018 TAS1R3Q7RTX0 852 aa16.74■□□□□ 0.27
ATG4B-215ENST00000468018 ADGRD2Q7Z7M1 963 aa16.74■□□□□ 0.27
ATG4B-215ENST00000468018 THNSL1Q8IYQ7 743 aa16.74■□□□□ 0.27
ATG4B-215ENST00000468018 GSTCDQ8NEC7 633 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms