RNA–Protein interactions for RNA: ENST00000467996.1

RNF13-208, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-208ENST00000467996 SRGAP1Q7Z6B7 1085 aa13.01□□□□□ -0.33
RNF13-208ENST00000467996 AOPEPQ8N6M6 819 aa13.01□□□□□ -0.33
RNF13-208ENST00000467996 FAM200AQ8TCP9 573 aa13.01□□□□□ -0.33
RNF13-208ENST00000467996 TMEM40Q8WWA1 233 aa13.01□□□□□ -0.33
RNF13-208ENST00000467996 CELF4Q9BZC1 486 aaKnown RBP13.01□□□□□ -0.33
RNF13-208ENST00000467996 GCOM2Q9BZD3 368 aaPredicted RBP13.01□□□□□ -0.33
RNF13-208ENST00000467996 INO80BQ9C086 356 aaPredicted RBP13.01□□□□□ -0.33
RNF13-208ENST00000467996 CBX8Q9HC52 389 aa13.01□□□□□ -0.33
RNF13-208ENST00000467996 TYW1Q9NV66 732 aaKnown RBP13.01□□□□□ -0.33
RNF13-208ENST00000467996 EXOC7Q9UPT5 735 aa13.01□□□□□ -0.33
RNF13-208ENST00000467996 KIAA0100Q14667 2235 aaKnown RBP13.01□□□□□ -0.33
RNF13-208ENST00000467996 SCN5AQ14524 2016 aa13□□□□□ -0.33
RNF13-208ENST00000467996 BICDL2A1A5D9 508 aa13□□□□□ -0.33
RNF13-208ENST00000467996 TGFB1I1O43294 461 aa13□□□□□ -0.33
RNF13-208ENST00000467996 CSDE1O75534 798 aaKnown RBP13□□□□□ -0.33
RNF13-208ENST00000467996 PIGRP01833 764 aa13□□□□□ -0.33
RNF13-208ENST00000467996 CHRNA1P02708 482 aa13□□□□□ -0.33
RNF13-208ENST00000467996 IQCF3P0C7M6 154 aa13□□□□□ -0.33
RNF13-208ENST00000467996 DARSP14868 501 aaKnown RBP13□□□□□ -0.33
RNF13-208ENST00000467996 CRYBB1P53674 252 aaPredicted RBP13□□□□□ -0.33
RNF13-208ENST00000467996 MYL5Q02045 173 aa13□□□□□ -0.33
RNF13-208ENST00000467996 LRRC63Q05C16 580 aa13□□□□□ -0.33
RNF13-208ENST00000467996 RBL2Q08999 1139 aa13□□□□□ -0.33
RNF13-208ENST00000467996 IQCB1Q15051 598 aa13□□□□□ -0.33
RNF13-208ENST00000467996 AMHR2Q16671 573 aa13□□□□□ -0.33
RNF13-208ENST00000467996 LRRC26Q2I0M4 334 aa13□□□□□ -0.33
RNF13-208ENST00000467996 UBE2Q1Q7Z7E8 422 aa13□□□□□ -0.33
RNF13-208ENST00000467996 LUZP1Q86V48 1076 aa13□□□□□ -0.33
RNF13-208ENST00000467996 DHX40Q8IX18 779 aaKnown RBP13□□□□□ -0.33
RNF13-208ENST00000467996 SYCP3Q8IZU3 236 aa13□□□□□ -0.33
RNF13-208ENST00000467996 CCDC155Q8N6L0 562 aa13□□□□□ -0.33
RNF13-208ENST00000467996 RNF214Q8ND24 703 aa13□□□□□ -0.33
RNF13-208ENST00000467996 ENOX1Q8TC92 643 aaKnown RBP13□□□□□ -0.33
RNF13-208ENST00000467996 BICD1Q96G01 975 aa13□□□□□ -0.33
RNF13-208ENST00000467996 ABHD8Q96I13 439 aa13□□□□□ -0.33
RNF13-208ENST00000467996 TSG101Q99816 390 aa13□□□□□ -0.33
RNF13-208ENST00000467996 GBP3Q9H0R5 595 aa13□□□□□ -0.33
RNF13-208ENST00000467996 RBSNQ9H1K0 784 aa13□□□□□ -0.33
RNF13-208ENST00000467996 FZD8Q9H461 694 aa13□□□□□ -0.33
RNF13-208ENST00000467996 PRMT7Q9NVM4 692 aaPredicted RBP13□□□□□ -0.33
RNF13-208ENST00000467996 TRAF3IP3Q9Y228 551 aa13□□□□□ -0.33
RNF13-208ENST00000467996 CNTNAP2Q9UHC6 1331 aa12.99□□□□□ -0.33
RNF13-208ENST00000467996 TTLL13PA6NNM8 815 aa12.99□□□□□ -0.33
RNF13-208ENST00000467996 TISP43B9A030 160 aa12.99□□□□□ -0.33
RNF13-208ENST00000467996 PDXKO00764 312 aa12.99□□□□□ -0.33
RNF13-208ENST00000467996 IKBKBO14920 756 aa12.99□□□□□ -0.33
RNF13-208ENST00000467996 HNRNPDLO14979 420 aaKnown RBP12.99□□□□□ -0.33
RNF13-208ENST00000467996 B4GALT5O43286 388 aa12.99□□□□□ -0.33
RNF13-208ENST00000467996 CALUO43852 315 aaPredicted RBP12.99□□□□□ -0.33
RNF13-208ENST00000467996 CKBP12277 381 aa12.99□□□□□ -0.33
RNF13-208ENST00000467996 FGFR4P22455 802 aa12.99□□□□□ -0.33
RNF13-208ENST00000467996 EIF4BP23588 611 aaKnown RBP12.99□□□□□ -0.33
RNF13-208ENST00000467996 LIG4P49917 911 aa12.99□□□□□ -0.33
RNF13-208ENST00000467996 TLE2Q04725 743 aa12.99□□□□□ -0.33
RNF13-208ENST00000467996 NCAPHQ15003 741 aa12.99□□□□□ -0.33
RNF13-208ENST00000467996 FAM187BQ17R55 369 aa12.99□□□□□ -0.33
RNF13-208ENST00000467996 EDRF1Q3B7T1 1238 aa12.99□□□□□ -0.33
RNF13-208ENST00000467996 FAM26DQ5JW98 314 aa12.99□□□□□ -0.33
RNF13-208ENST00000467996 ZNF618Q5T7W0 954 aa12.99□□□□□ -0.33
RNF13-208ENST00000467996 SLC39A4Q6P5W5 647 aa12.99□□□□□ -0.33
RNF13-208ENST00000467996 FOXR2Q6PJQ5 311 aa12.99□□□□□ -0.33
RNF13-208ENST00000467996 TRAF7Q6Q0C0 670 aa12.99□□□□□ -0.33
RNF13-208ENST00000467996 CAGE1Q8TC20 777 aa12.99□□□□□ -0.33
RNF13-208ENST00000467996 PRIMPOLQ96LW4 560 aa12.99□□□□□ -0.33
RNF13-208ENST00000467996 TOX2Q96NM4 488 aa12.99□□□□□ -0.33
RNF13-208ENST00000467996 DUSP9Q99956 384 aaKnown RBP12.99□□□□□ -0.33
RNF13-208ENST00000467996 MRPL4Q9BYD3 311 aaKnown RBP12.99□□□□□ -0.33
RNF13-208ENST00000467996 AGPAT3Q9NRZ7 376 aa12.99□□□□□ -0.33
RNF13-208ENST00000467996 ATP11BQ9Y2G3 1177 aa12.99□□□□□ -0.33
RNF13-208ENST00000467996 USP20Q9Y2K6 914 aa12.99□□□□□ -0.33
RNF13-208ENST00000467996 RALGAPA2Q2PPJ7 1873 aa12.99□□□□□ -0.33
RNF13-208ENST00000467996 ANK1P16157 1881 aa12.98□□□□□ -0.33
RNF13-208ENST00000467996 CCDC85CA6NKD9 419 aa12.98□□□□□ -0.33
RNF13-208ENST00000467996 DCDC2CA8MYV0 355 aa12.98□□□□□ -0.33
RNF13-208ENST00000467996 ANKRD63C9JTQ0 380 aa12.98□□□□□ -0.33
RNF13-208ENST00000467996 ACKR2O00590 384 aa12.98□□□□□ -0.33
RNF13-208ENST00000467996 TSPAN1O60635 241 aa12.98□□□□□ -0.33
RNF13-208ENST00000467996 ERLIN2O94905 339 aa12.98□□□□□ -0.33
RNF13-208ENST00000467996 SFPQP23246 707 aaKnown RBP eCLIP12.98□□□□□ -0.33
RNF13-208ENST00000467996 FAAP100Q0VG06 881 aa12.98□□□□□ -0.33
RNF13-208ENST00000467996 BFSP2Q13515 415 aa12.98□□□□□ -0.33
RNF13-208ENST00000467996 PRPF4BQ13523 1007 aaKnown RBP12.98□□□□□ -0.33
RNF13-208ENST00000467996 NFIL3Q16649 462 aa12.98□□□□□ -0.33
RNF13-208ENST00000467996 SPATA1Q5VX52 437 aa12.98□□□□□ -0.33
RNF13-208ENST00000467996 ZPBP2Q6X784 338 aa12.98□□□□□ -0.33
RNF13-208ENST00000467996 HS2ST1Q7LGA3 356 aa12.98□□□□□ -0.33
RNF13-208ENST00000467996 ZC3H3Q8IXZ2 948 aaKnown RBP12.98□□□□□ -0.33
RNF13-208ENST00000467996 GOLGA5Q8TBA6 731 aa12.98□□□□□ -0.33
RNF13-208ENST00000467996 TARS2Q9BW92 718 aaKnown RBP12.98□□□□□ -0.33
RNF13-208ENST00000467996 CGNQ9P2M7 1197 aaKnown RBP12.98□□□□□ -0.33
RNF13-208ENST00000467996 NFE2L3Q9Y4A8 694 aa12.98□□□□□ -0.33
RNF13-208ENST00000467996 LTBP2Q14767 1821 aa12.97□□□□□ -0.33
RNF13-208ENST00000467996 SMTNL1A8MU46 457 aa12.97□□□□□ -0.33
RNF13-208ENST00000467996 BECN2A8MW95 431 aa12.97□□□□□ -0.33
RNF13-208ENST00000467996 RBAK-RBAKDNI3L0D1 243 aa12.97□□□□□ -0.33
RNF13-208ENST00000467996 PITPNM1O00562 1244 aa12.97□□□□□ -0.33
RNF13-208ENST00000467996 CLIC2O15247 247 aa12.97□□□□□ -0.33
RNF13-208ENST00000467996 NR3C1P04150 777 aa12.97□□□□□ -0.33
RNF13-208ENST00000467996 ARF4P18085 180 aaPredicted RBP12.97□□□□□ -0.33
RNF13-208ENST00000467996 NR2F2P24468 414 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms