RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 K7ERI5 159 aa7.53□□□□□ -1.2
SCAF4-204ENST00000467731 CD4P01730 458 aa7.53□□□□□ -1.2
SCAF4-204ENST00000467731 EDN1P05305 212 aa7.53□□□□□ -1.2
SCAF4-204ENST00000467731 THPOP40225 353 aa7.53□□□□□ -1.2
SCAF4-204ENST00000467731 PHKA2P46019 1235 aa7.53□□□□□ -1.2
SCAF4-204ENST00000467731 CDC42EP1Q00587 391 aa7.53□□□□□ -1.2
SCAF4-204ENST00000467731 PLCB2Q00722 1185 aa7.53□□□□□ -1.2
SCAF4-204ENST00000467731 POU5F1BQ06416 359 aa7.53□□□□□ -1.2
SCAF4-204ENST00000467731 SNX17Q15036 470 aa7.53□□□□□ -1.2
SCAF4-204ENST00000467731 KNOP1Q1ED39 458 aaKnown RBP7.53□□□□□ -1.2
SCAF4-204ENST00000467731 NECAB2Q7Z6G3 386 aa7.53□□□□□ -1.2
SCAF4-204ENST00000467731 RPAINQ86UA6 219 aa7.53□□□□□ -1.2
SCAF4-204ENST00000467731 RSPH3Q86UC2 560 aa7.53□□□□□ -1.2
SCAF4-204ENST00000467731 MAP4K3Q8IVH8 894 aa7.53□□□□□ -1.2
SCAF4-204ENST00000467731 ZBTB8OSQ8IWT0 167 aa7.53□□□□□ -1.2
SCAF4-204ENST00000467731 TMEM40Q8WWA1 233 aa7.53□□□□□ -1.2
SCAF4-204ENST00000467731 NELFBQ8WX92 580 aa7.53□□□□□ -1.2
SCAF4-204ENST00000467731 MED15Q96RN5 788 aa7.53□□□□□ -1.2
SCAF4-204ENST00000467731 INO80BQ9C086 356 aaPredicted RBP7.53□□□□□ -1.2
SCAF4-204ENST00000467731 NAT10Q9H0A0 1025 aaKnown RBP7.53□□□□□ -1.2
SCAF4-204ENST00000467731 CCDC113Q9H0I3 377 aa7.53□□□□□ -1.2
SCAF4-204ENST00000467731 C2orf40Q9H1Z8 148 aa7.53□□□□□ -1.2
SCAF4-204ENST00000467731 KCTD10Q9H3F6 313 aa7.53□□□□□ -1.2
SCAF4-204ENST00000467731 SEMA6BQ9H3T3 888 aa7.53□□□□□ -1.2
SCAF4-204ENST00000467731 USP20Q9Y2K6 914 aa7.53□□□□□ -1.2
SCAF4-204ENST00000467731 RANBP2P49792 3224 aaKnown RBP7.53□□□□□ -1.2
SCAF4-204ENST00000467731 TET1Q8NFU7 2136 aa7.53□□□□□ -1.2
SCAF4-204ENST00000467731 UBE4BO95155 1302 aa7.53□□□□□ -1.2
SCAF4-204ENST00000467731 PHLPP2Q6ZVD8 1323 aa7.53□□□□□ -1.2
SCAF4-204ENST00000467731 TTC36A6NLP5 189 aa7.53□□□□□ -1.2
SCAF4-204ENST00000467731 CAPN2P17655 700 aa7.53□□□□□ -1.2
SCAF4-204ENST00000467731 PPP1R2P41236 205 aa7.53□□□□□ -1.2
SCAF4-204ENST00000467731 EFNA5P52803 228 aa7.53□□□□□ -1.2
SCAF4-204ENST00000467731 MRPS6P82932 125 aaKnown RBP7.53□□□□□ -1.2
SCAF4-204ENST00000467731 MBTD1Q05BQ5 628 aa7.53□□□□□ -1.2
SCAF4-204ENST00000467731 TRIM71Q2Q1W2 868 aaKnown RBP7.53□□□□□ -1.2
SCAF4-204ENST00000467731 TRIM60Q495X7 471 aa7.53□□□□□ -1.2
SCAF4-204ENST00000467731 C1orf53Q5VUE5 145 aa7.53□□□□□ -1.2
SCAF4-204ENST00000467731 CENPPQ6IPU0 288 aa7.53□□□□□ -1.2
SCAF4-204ENST00000467731 ANKRD33Q7Z3H0 272 aa7.53□□□□□ -1.2
SCAF4-204ENST00000467731 RNF214Q8ND24 703 aa7.53□□□□□ -1.2
SCAF4-204ENST00000467731 FAM200AQ8TCP9 573 aa7.53□□□□□ -1.2
SCAF4-204ENST00000467731 KCNN1Q92952 543 aa7.53□□□□□ -1.2
SCAF4-204ENST00000467731 DHTKD1Q96HY7 919 aaPredicted RBP7.53□□□□□ -1.2
SCAF4-204ENST00000467731 CDY2AQ9Y6F7 541 aa7.53□□□□□ -1.2
SCAF4-204ENST00000467731 SCN5AQ14524 2016 aa7.52□□□□□ -1.21
SCAF4-204ENST00000467731 TISP43B9A030 160 aa7.52□□□□□ -1.21
SCAF4-204ENST00000467731 M0QZ92 97 aa7.52□□□□□ -1.21
SCAF4-204ENST00000467731 HNRNPDLO14979 420 aaKnown RBP7.52□□□□□ -1.21
SCAF4-204ENST00000467731 CHRNA1P02708 482 aa7.52□□□□□ -1.21
SCAF4-204ENST00000467731 RPLP2P05387 115 aaKnown RBP7.52□□□□□ -1.21
SCAF4-204ENST00000467731 CCNE1P24864 410 aa7.52□□□□□ -1.21
SCAF4-204ENST00000467731 ERCC5P28715 1186 aaPredicted RBP7.52□□□□□ -1.21
SCAF4-204ENST00000467731 ABCD1P33897 745 aa7.52□□□□□ -1.21
SCAF4-204ENST00000467731 STRN3Q13033 797 aa7.52□□□□□ -1.21
SCAF4-204ENST00000467731 MAPK6Q16659 721 aa7.52□□□□□ -1.21
SCAF4-204ENST00000467731 LRRC26Q2I0M4 334 aa7.52□□□□□ -1.21
SCAF4-204ENST00000467731 IFNLR1Q8IU57 520 aaPredicted RBP7.52□□□□□ -1.21
SCAF4-204ENST00000467731 SYCP3Q8IZU3 236 aa7.52□□□□□ -1.21
SCAF4-204ENST00000467731 P2RX5Q93086 422 aa7.52□□□□□ -1.21
SCAF4-204ENST00000467731 HVCN1Q96D96 273 aa7.52□□□□□ -1.21
SCAF4-204ENST00000467731 EEF2KMTQ96G04 330 aa7.52□□□□□ -1.21
SCAF4-204ENST00000467731 ACCSQ96QU6 501 aa7.52□□□□□ -1.21
SCAF4-204ENST00000467731 BPIFA3Q9BQP9 254 aa7.52□□□□□ -1.21
SCAF4-204ENST00000467731 CELF4Q9BZC1 486 aaKnown RBP7.52□□□□□ -1.21
SCAF4-204ENST00000467731 GCOM2Q9BZD3 368 aaPredicted RBP7.52□□□□□ -1.21
SCAF4-204ENST00000467731 GBP3Q9H0R5 595 aa7.52□□□□□ -1.21
SCAF4-204ENST00000467731 TMEM134Q9H6X4 195 aa7.52□□□□□ -1.21
SCAF4-204ENST00000467731 TMEM206Q9H813 350 aa7.52□□□□□ -1.21
SCAF4-204ENST00000467731 CBX8Q9HC52 389 aa7.52□□□□□ -1.21
SCAF4-204ENST00000467731 RWDD2AQ9UIY3 292 aa7.52□□□□□ -1.21
SCAF4-204ENST00000467731 ATP11BQ9Y2G3 1177 aa7.52□□□□□ -1.21
SCAF4-204ENST00000467731 LAMA3Q16787 3333 aa7.52□□□□□ -1.21
SCAF4-204ENST00000467731 TANC1Q9C0D5 1861 aa7.52□□□□□ -1.21
SCAF4-204ENST00000467731 TTLL13PA6NNM8 815 aa7.52□□□□□ -1.21
SCAF4-204ENST00000467731 TGFB1I1O43294 461 aa7.52□□□□□ -1.21
SCAF4-204ENST00000467731 CAVIN2O95810 425 aa7.52□□□□□ -1.21
SCAF4-204ENST00000467731 PRKCBP05771 671 aa7.52□□□□□ -1.21
SCAF4-204ENST00000467731 CKBP12277 381 aa7.52□□□□□ -1.21
SCAF4-204ENST00000467731 DARSP14868 501 aaKnown RBP7.52□□□□□ -1.21
SCAF4-204ENST00000467731 SCP2P22307 547 aa7.52□□□□□ -1.21
SCAF4-204ENST00000467731 FGFR4P22455 802 aa7.52□□□□□ -1.21
SCAF4-204ENST00000467731 EIF4BP23588 611 aaKnown RBP7.52□□□□□ -1.21
SCAF4-204ENST00000467731 TLE2Q04725 743 aa7.52□□□□□ -1.21
SCAF4-204ENST00000467731 MGAT3Q09327 533 aa7.52□□□□□ -1.21
SCAF4-204ENST00000467731 FAAP100Q0VG06 881 aa7.52□□□□□ -1.21
SCAF4-204ENST00000467731 IQCB1Q15051 598 aa7.52□□□□□ -1.21
SCAF4-204ENST00000467731 ZCWPW2Q504Y3 356 aa7.52□□□□□ -1.21
SCAF4-204ENST00000467731 CT47A1Q5JQC4 288 aaPredicted RBP7.52□□□□□ -1.21
SCAF4-204ENST00000467731 ZNF618Q5T7W0 954 aa7.52□□□□□ -1.21
SCAF4-204ENST00000467731 ANKRD40Q6AI12 368 aa7.52□□□□□ -1.21
SCAF4-204ENST00000467731 TTI2Q6NXR4 508 aa7.52□□□□□ -1.21
SCAF4-204ENST00000467731 SRGAP1Q7Z6B7 1085 aa7.52□□□□□ -1.21
SCAF4-204ENST00000467731 UBE2Q1Q7Z7E8 422 aa7.52□□□□□ -1.21
SCAF4-204ENST00000467731 LUZP1Q86V48 1076 aa7.52□□□□□ -1.21
SCAF4-204ENST00000467731 DHX40Q8IX18 779 aaKnown RBP7.52□□□□□ -1.21
SCAF4-204ENST00000467731 AOPEPQ8N6M6 819 aa7.52□□□□□ -1.21
SCAF4-204ENST00000467731 TOX2Q96NM4 488 aa7.52□□□□□ -1.21
SCAF4-204ENST00000467731 FZD8Q9H461 694 aa7.52□□□□□ -1.21
SCAF4-204ENST00000467731 TRPV2Q9Y5S1 764 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms