RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 CNTNAP2Q9UHC6 1331 aa13.7□□□□□ -0.22
UBR4-211ENST00000467272 ANHXE9PGG2 379 aa13.7□□□□□ -0.22
UBR4-211ENST00000467272 NRP1O14786 923 aa13.7□□□□□ -0.22
UBR4-211ENST00000467272 TEX28O15482 410 aa13.7□□□□□ -0.22
UBR4-211ENST00000467272 HMGB1P09429 215 aaKnown RBP13.7□□□□□ -0.22
UBR4-211ENST00000467272 DSC1Q08554 894 aa13.7□□□□□ -0.22
UBR4-211ENST00000467272 BMP2KLQ5H9B9 411 aa13.7□□□□□ -0.22
UBR4-211ENST00000467272 SMG8Q8ND04 991 aaKnown RBP13.7□□□□□ -0.22
UBR4-211ENST00000467272 BICD2Q8TD16 824 aa13.7□□□□□ -0.22
UBR4-211ENST00000467272 RSAD2Q8WXG1 361 aa13.7□□□□□ -0.22
UBR4-211ENST00000467272 PHKBQ93100 1093 aa13.7□□□□□ -0.22
UBR4-211ENST00000467272 RMDN1Q96DB5 314 aa13.7□□□□□ -0.22
UBR4-211ENST00000467272 SH2D3AQ9BRG2 576 aa13.7□□□□□ -0.22
UBR4-211ENST00000467272 HERC2P3Q9BVR0 1158 aa13.7□□□□□ -0.22
UBR4-211ENST00000467272 TEKT3Q9BXF9 490 aa13.7□□□□□ -0.22
UBR4-211ENST00000467272 RNF26Q9BY78 433 aaPredicted RBP13.7□□□□□ -0.22
UBR4-211ENST00000467272 SH3GLB2Q9NR46 395 aa13.7□□□□□ -0.22
UBR4-211ENST00000467272 CHST7Q9NS84 486 aa13.7□□□□□ -0.22
UBR4-211ENST00000467272 C2orf16Q68DN1 1984 aa13.7□□□□□ -0.22
UBR4-211ENST00000467272 ACACBO00763 2458 aa13.7□□□□□ -0.22
UBR4-211ENST00000467272 CHMP2AO43633 222 aa13.69□□□□□ -0.22
UBR4-211ENST00000467272 ALDH2P05091 517 aa13.69□□□□□ -0.22
UBR4-211ENST00000467272 CPA1P15085 419 aa13.69□□□□□ -0.22
UBR4-211ENST00000467272 IFNAR1P17181 557 aa13.69□□□□□ -0.22
UBR4-211ENST00000467272 NCLP19338 710 aaKnown RBP13.69□□□□□ -0.22
UBR4-211ENST00000467272 KLRC2P26717 231 aa13.69□□□□□ -0.22
UBR4-211ENST00000467272 DNM2P50570 870 aa13.69□□□□□ -0.22
UBR4-211ENST00000467272 KRT32Q14532 448 aa13.69□□□□□ -0.22
UBR4-211ENST00000467272 MTERF2Q49AM1 385 aa13.69□□□□□ -0.22
UBR4-211ENST00000467272 PHLDB3Q6NSJ2 640 aa13.69□□□□□ -0.22
UBR4-211ENST00000467272 LILRA6Q6PI73 481 aa13.69□□□□□ -0.22
UBR4-211ENST00000467272 RHPN2Q8IUC4 686 aa13.69□□□□□ -0.22
UBR4-211ENST00000467272 COLGALT2Q8IYK4 626 aa13.69□□□□□ -0.22
UBR4-211ENST00000467272 GPR65Q8IYL9 337 aa13.69□□□□□ -0.22
UBR4-211ENST00000467272 MAML2Q8IZL2 1156 aaPredicted RBP13.69□□□□□ -0.22
UBR4-211ENST00000467272 ZNF579Q8NAF0 562 aaKnown RBP13.69□□□□□ -0.22
UBR4-211ENST00000467272 HDAC7Q8WUI4 952 aa13.69□□□□□ -0.22
UBR4-211ENST00000467272 NXPE3Q969Y0 559 aa13.69□□□□□ -0.22
UBR4-211ENST00000467272 PGBD4Q96DM1 585 aa13.69□□□□□ -0.22
UBR4-211ENST00000467272 SCLT1Q96NL6 688 aa13.69□□□□□ -0.22
UBR4-211ENST00000467272 MYADMQ96S97 322 aa13.69□□□□□ -0.22
UBR4-211ENST00000467272 DHX33Q9H6R0 707 aaKnown RBP13.69□□□□□ -0.22
UBR4-211ENST00000467272 MAN1C1Q9NR34 630 aa13.69□□□□□ -0.22
UBR4-211ENST00000467272 MRPL17Q9NRX2 175 aaKnown RBP13.69□□□□□ -0.22
UBR4-211ENST00000467272 KANSL3Q9P2N6 904 aa13.69□□□□□ -0.22
UBR4-211ENST00000467272 WRAP73Q9P2S5 460 aaPredicted RBP13.69□□□□□ -0.22
UBR4-211ENST00000467272 SEPT9Q9UHD8 586 aaPredicted RBP13.69□□□□□ -0.22
UBR4-211ENST00000467272 TCEAL9Q9UHQ7 104 aa13.69□□□□□ -0.22
UBR4-211ENST00000467272 INPP5FQ9Y2H2 1132 aa13.69□□□□□ -0.22
UBR4-211ENST00000467272 CLUHO75153 1309 aa13.68□□□□□ -0.22
UBR4-211ENST00000467272 CCDC195A0A1B0GUA6 201 aa13.68□□□□□ -0.22
UBR4-211ENST00000467272 TDP2O95551 362 aa13.68□□□□□ -0.22
UBR4-211ENST00000467272 LMNAP02545 664 aaKnown RBP13.68□□□□□ -0.22
UBR4-211ENST00000467272 SRFP11831 508 aa13.68□□□□□ -0.22
UBR4-211ENST00000467272 CA8P35219 290 aa13.68□□□□□ -0.22
UBR4-211ENST00000467272 DSG1Q02413 1049 aa13.68□□□□□ -0.22
UBR4-211ENST00000467272 RNASELQ05823 741 aaKnown RBP13.68□□□□□ -0.22
UBR4-211ENST00000467272 MOXD1Q6UVY6 613 aa13.68□□□□□ -0.22
UBR4-211ENST00000467272 CATSPER4Q7RTX7 472 aa13.68□□□□□ -0.22
UBR4-211ENST00000467272 MIER3Q7Z3K6 550 aa13.68□□□□□ -0.22
UBR4-211ENST00000467272 TBCKQ8TEA7 893 aa13.68□□□□□ -0.22
UBR4-211ENST00000467272 PRPF31Q8WWY3 499 aaKnown RBP13.68□□□□□ -0.22
UBR4-211ENST00000467272 GBP3Q9H0R5 595 aa13.68□□□□□ -0.22
UBR4-211ENST00000467272 RSAD1Q9HA92 442 aa13.68□□□□□ -0.22
UBR4-211ENST00000467272 SLC2A4RGQ9NR83 387 aa13.68□□□□□ -0.22
UBR4-211ENST00000467272 DLL3Q9NYJ7 618 aa13.68□□□□□ -0.22
UBR4-211ENST00000467272 VAV3Q9UKW4 847 aa13.68□□□□□ -0.22
UBR4-211ENST00000467272 FAN1Q9Y2M0 1017 aa13.68□□□□□ -0.22
UBR4-211ENST00000467272 TPRP12270 2363 aaKnown RBP13.68□□□□□ -0.22
UBR4-211ENST00000467272 CHD6Q8TD26 2715 aa13.68□□□□□ -0.22
UBR4-211ENST00000467272 CHD8Q9HCK8 2581 aa13.67□□□□□ -0.22
UBR4-211ENST00000467272 MED19A0JLT2 244 aaPredicted RBP13.67□□□□□ -0.22
UBR4-211ENST00000467272 F8W810 466 aa13.67□□□□□ -0.22
UBR4-211ENST00000467272 EML1O00423 815 aa13.67□□□□□ -0.22
UBR4-211ENST00000467272 RFPL2O75678 378 aa13.67□□□□□ -0.22
UBR4-211ENST00000467272 SSBP05455 408 aaKnown RBP eCLIP13.67□□□□□ -0.22
UBR4-211ENST00000467272 GLULP15104 373 aa13.67□□□□□ -0.22
UBR4-211ENST00000467272 PSMC5P62195 406 aa13.67□□□□□ -0.22
UBR4-211ENST00000467272 HTR4Q13639 388 aa13.67□□□□□ -0.22
UBR4-211ENST00000467272 Q6ZUG5 572 aa13.67□□□□□ -0.22
UBR4-211ENST00000467272 SRGAP1Q7Z6B7 1085 aa13.67□□□□□ -0.22
UBR4-211ENST00000467272 TMEM87AQ8NBN3 555 aa13.67□□□□□ -0.22
UBR4-211ENST00000467272 DAGLBQ8NCG7 672 aa13.67□□□□□ -0.22
UBR4-211ENST00000467272 GSTCDQ8NEC7 633 aa13.67□□□□□ -0.22
UBR4-211ENST00000467272 CCDC148Q8NFR7 591 aa13.67□□□□□ -0.22
UBR4-211ENST00000467272 URGCPQ8TCY9 931 aa13.67□□□□□ -0.22
UBR4-211ENST00000467272 BRF1Q92994 677 aa13.67□□□□□ -0.22
UBR4-211ENST00000467272 RNF39Q9H2S5 420 aa13.67□□□□□ -0.22
UBR4-211ENST00000467272 TBC1D17Q9HA65 648 aa13.67□□□□□ -0.22
UBR4-211ENST00000467272 KCNMB3Q9NPA1 279 aa13.67□□□□□ -0.22
UBR4-211ENST00000467272 VPS54Q9P1Q0 977 aa13.67□□□□□ -0.22
UBR4-211ENST00000467272 FBXL21Q9UKT6 434 aa13.67□□□□□ -0.22
UBR4-211ENST00000467272 PPME1Q9Y570 386 aa13.67□□□□□ -0.22
UBR4-211ENST00000467272 COL4A3BPQ9Y5P4 624 aa13.67□□□□□ -0.22
UBR4-211ENST00000467272 DOCK8Q8NF50 2099 aa13.67□□□□□ -0.22
UBR4-211ENST00000467272 DDX11L8A8MPP1 907 aa13.66□□□□□ -0.22
UBR4-211ENST00000467272 POMCP01189 267 aa13.66□□□□□ -0.22
UBR4-211ENST00000467272 ADH1AP07327 375 aa13.66□□□□□ -0.22
UBR4-211ENST00000467272 CFHP08603 1231 aa13.66□□□□□ -0.22
UBR4-211ENST00000467272 SP9P0CG40 484 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms