RNA–Protein interactions for RNA: ENST00000467173.1

USP9X-206, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 3

Gene USP9X, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-206ENST00000467173 TMEM260Q9NX78 707 aa5.96□□□□□ -1.46
USP9X-206ENST00000467173 TNPO3Q9Y5L0 923 aaKnown RBP5.96□□□□□ -1.46
USP9X-206ENST00000467173 STC2O76061 302 aa5.95□□□□□ -1.46
USP9X-206ENST00000467173 WNT3AP56704 352 aa5.95□□□□□ -1.46
USP9X-206ENST00000467173 ZZZ3Q8IYH5 903 aa5.95□□□□□ -1.46
USP9X-206ENST00000467173 SUPT20HQ8NEM7 779 aa5.95□□□□□ -1.46
USP9X-206ENST00000467173 CLCA2Q9UQC9 943 aa5.95□□□□□ -1.46
USP9X-206ENST00000467173 OPHN1O60890 802 aa5.94□□□□□ -1.46
USP9X-206ENST00000467173 DNAJC8O75937 253 aaPredicted RBP5.94□□□□□ -1.46
USP9X-206ENST00000467173 ASLP04424 464 aa5.94□□□□□ -1.46
USP9X-206ENST00000467173 SDSP20132 328 aa5.94□□□□□ -1.46
USP9X-206ENST00000467173 PTX3P26022 381 aaPredicted RBP5.94□□□□□ -1.46
USP9X-206ENST00000467173 AVPR1BP47901 424 aa5.94□□□□□ -1.46
USP9X-206ENST00000467173 VPS72Q15906 364 aa5.94□□□□□ -1.46
USP9X-206ENST00000467173 KIAA1841Q6NSI8 718 aa5.94□□□□□ -1.46
USP9X-206ENST00000467173 JAZF1Q86VZ6 243 aa5.94□□□□□ -1.46
USP9X-206ENST00000467173 CXorf67Q86X51 503 aaPredicted RBP5.94□□□□□ -1.46
USP9X-206ENST00000467173 UNC5BQ8IZJ1 945 aa5.94□□□□□ -1.46
USP9X-206ENST00000467173 BEND2Q8NDZ0 799 aa5.94□□□□□ -1.46
USP9X-206ENST00000467173 OR52N2Q8NGI0 321 aa5.94□□□□□ -1.46
USP9X-206ENST00000467173 BBC3Q96PG8 261 aaPredicted RBP5.94□□□□□ -1.46
USP9X-206ENST00000467173 DCLRE1CQ96SD1 692 aaKnown RBP5.94□□□□□ -1.46
USP9X-206ENST00000467173 NOL10Q9BSC4 688 aaKnown RBP5.94□□□□□ -1.46
USP9X-206ENST00000467173 ENKD1Q9H0I2 346 aa5.94□□□□□ -1.46
USP9X-206ENST00000467173 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.94□□□□□ -1.46
USP9X-206ENST00000467173 HDAC5Q9UQL6 1122 aa5.94□□□□□ -1.46
USP9X-206ENST00000467173 GAGE12BA1L429 117 aa5.93□□□□□ -1.46
USP9X-206ENST00000467173 GAGE12HA6NDE8 117 aa5.93□□□□□ -1.46
USP9X-206ENST00000467173 RNASET2O00584 256 aaKnown RBP5.93□□□□□ -1.46
USP9X-206ENST00000467173 DNAJC6O75061 913 aa5.93□□□□□ -1.46
USP9X-206ENST00000467173 ALDH1A2O94788 518 aa5.93□□□□□ -1.46
USP9X-206ENST00000467173 PRPF6O94906 941 aaKnown RBP5.93□□□□□ -1.46
USP9X-206ENST00000467173 APOL3O95236 402 aa5.93□□□□□ -1.46
USP9X-206ENST00000467173 GAAP10253 952 aa5.93□□□□□ -1.46
USP9X-206ENST00000467173 FLT3P36888 993 aa5.93□□□□□ -1.46
USP9X-206ENST00000467173 NFE2L2Q16236 605 aa5.93□□□□□ -1.46
USP9X-206ENST00000467173 FAM214AQ32MH5 1076 aa5.93□□□□□ -1.46
USP9X-206ENST00000467173 TKFCQ3LXA3 575 aa5.93□□□□□ -1.46
USP9X-206ENST00000467173 ZKSCAN2Q63HK3 967 aa5.93□□□□□ -1.46
USP9X-206ENST00000467173 Q6YL49 198 aa5.93□□□□□ -1.46
USP9X-206ENST00000467173 DOK3Q7L591 496 aa5.93□□□□□ -1.46
USP9X-206ENST00000467173 OR5M3Q8NGP4 307 aa5.93□□□□□ -1.46
USP9X-206ENST00000467173 NTN5Q8WTR8 489 aaPredicted RBP5.93□□□□□ -1.46
USP9X-206ENST00000467173 NAF1Q96HR8 494 aaKnown RBP5.93□□□□□ -1.46
USP9X-206ENST00000467173 NDC1Q9BTX1 674 aa5.93□□□□□ -1.46
USP9X-206ENST00000467173 SYNPO2LQ9H987 977 aa5.93□□□□□ -1.46
USP9X-206ENST00000467173 B4GALT6Q9UBX8 382 aa5.93□□□□□ -1.46
USP9X-206ENST00000467173 A0A0A6YYK5 440 aaPredicted RBP5.92□□□□□ -1.46
USP9X-206ENST00000467173 CENPVL1A0A0U1RR11 272 aa5.92□□□□□ -1.46
USP9X-206ENST00000467173 KIAA0355O15063 1070 aa5.92□□□□□ -1.46
USP9X-206ENST00000467173 OPA1O60313 960 aa5.92□□□□□ -1.46
USP9X-206ENST00000467173 ZEB1P37275 1124 aaPredicted RBP5.92□□□□□ -1.46
USP9X-206ENST00000467173 ZNF460Q14592 562 aa5.92□□□□□ -1.46
USP9X-206ENST00000467173 FNDC3BQ53EP0 1204 aaKnown RBP5.92□□□□□ -1.46
USP9X-206ENST00000467173 PPP1R14CQ8TAE6 165 aa5.92□□□□□ -1.46
USP9X-206ENST00000467173 IL17RAQ96F46 866 aa5.92□□□□□ -1.46
USP9X-206ENST00000467173 SERHL2Q9H4I8 314 aa5.92□□□□□ -1.46
USP9X-206ENST00000467173 ING3Q9NXR8 418 aa5.92□□□□□ -1.46
USP9X-206ENST00000467173 SPO11Q9Y5K1 396 aa5.92□□□□□ -1.46
USP9X-206ENST00000467173 TMEM200CA6NKL6 621 aa5.91□□□□□ -1.46
USP9X-206ENST00000467173 AHRRA9YTQ3 701 aa5.91□□□□□ -1.46
USP9X-206ENST00000467173 ZFP36P26651 326 aaKnown RBP5.91□□□□□ -1.46
USP9X-206ENST00000467173 MRPL49Q13405 166 aaKnown RBP5.91□□□□□ -1.46
USP9X-206ENST00000467173 ERCC6LQ2NKX8 1250 aa5.91□□□□□ -1.46
USP9X-206ENST00000467173 UBE2R2Q712K3 238 aaPredicted RBP5.91□□□□□ -1.46
USP9X-206ENST00000467173 ARHGEF19Q8IW93 802 aa5.91□□□□□ -1.46
USP9X-206ENST00000467173 LCORLQ8N3X6 602 aa5.91□□□□□ -1.46
USP9X-206ENST00000467173 MRFAP1L1Q96HT8 127 aa5.91□□□□□ -1.46
USP9X-206ENST00000467173 COQ10AQ96MF6 247 aa5.91□□□□□ -1.46
USP9X-206ENST00000467173 ELF4Q99607 663 aaPredicted RBP5.91□□□□□ -1.46
USP9X-206ENST00000467173 SOX7Q9BT81 388 aa5.91□□□□□ -1.46
USP9X-206ENST00000467173 MYL10Q9BUA6 226 aa5.91□□□□□ -1.46
USP9X-206ENST00000467173 ZNF768Q9H5H4 540 aaKnown RBP5.91□□□□□ -1.46
USP9X-206ENST00000467173 COX11Q9Y6N1 276 aa5.91□□□□□ -1.46
USP9X-206ENST00000467173 DIRC3C9JPN6 131 aa5.9□□□□□ -1.46
USP9X-206ENST00000467173 SLC9A1P19634 815 aa5.9□□□□□ -1.46
USP9X-206ENST00000467173 CREB3L3Q68CJ9 461 aa5.9□□□□□ -1.46
USP9X-206ENST00000467173 ESRP1Q6NXG1 681 aaKnown RBP5.9□□□□□ -1.46
USP9X-206ENST00000467173 GDF7Q7Z4P5 450 aa5.9□□□□□ -1.46
USP9X-206ENST00000467173 NELL1Q92832 810 aa5.9□□□□□ -1.46
USP9X-206ENST00000467173 CPEB1Q9BZB8 566 aaKnown RBP5.9□□□□□ -1.46
USP9X-206ENST00000467173 POFUT1Q9H488 388 aa5.9□□□□□ -1.46
USP9X-206ENST00000467173 TRPM5Q9NZQ8 1165 aa5.9□□□□□ -1.46
USP9X-206ENST00000467173 CBX4O00257 560 aa5.89□□□□□ -1.47
USP9X-206ENST00000467173 ASMTLO95671 621 aa5.89□□□□□ -1.47
USP9X-206ENST00000467173 CDK4P11802 303 aa5.89□□□□□ -1.47
USP9X-206ENST00000467173 APOBEC3AP31941 199 aaPredicted RBP5.89□□□□□ -1.47
USP9X-206ENST00000467173 BMPR1AP36894 532 aa5.89□□□□□ -1.47
USP9X-206ENST00000467173 GZMKP49863 264 aa5.89□□□□□ -1.47
USP9X-206ENST00000467173 BLOC1S1P78537 153 aa5.89□□□□□ -1.47
USP9X-206ENST00000467173 COLEC12Q5KU26 742 aa5.89□□□□□ -1.47
USP9X-206ENST00000467173 PIK3R6Q5UE93 754 aa5.89□□□□□ -1.47
USP9X-206ENST00000467173 UNQ6494/PRO21346Q6UXR6 183 aa5.89□□□□□ -1.47
USP9X-206ENST00000467173 RD3Q7Z3Z2 195 aa5.89□□□□□ -1.47
USP9X-206ENST00000467173 PLXDC1Q8IUK5 500 aa5.89□□□□□ -1.47
USP9X-206ENST00000467173 WDR11Q9BZH6 1224 aa5.89□□□□□ -1.47
USP9X-206ENST00000467173 AKIP1Q9NQ31 210 aa5.89□□□□□ -1.47
USP9X-206ENST00000467173 INSL6Q9Y581 213 aa5.89□□□□□ -1.47
USP9X-206ENST00000467173 PCDHB6Q9Y5E3 794 aa5.89□□□□□ -1.47
USP9X-206ENST00000467173 MRPL42Q9Y6G3 142 aaKnown RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms