RNA–Protein interactions for RNA: ENST00000465966.4

DDR1-242, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 268 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-242ENST00000465966 CHST12Q9NRB3 414 aa9.62□□□□□ -0.87
DDR1-242ENST00000465966 IGSF9Q9P2J2 1179 aa9.62□□□□□ -0.87
DDR1-242ENST00000465966 SAMM50Q9Y512 469 aa9.62□□□□□ -0.87
DDR1-242ENST00000465966 PCDHA10Q9Y5I2 948 aa9.62□□□□□ -0.87
DDR1-242ENST00000465966 TRIOO75962 3097 aa9.62□□□□□ -0.87
DDR1-242ENST00000465966 FAM205CA6NFA0 338 aa9.61□□□□□ -0.87
DDR1-242ENST00000465966 BTBD18B2RXH4 712 aa9.61□□□□□ -0.87
DDR1-242ENST00000465966 FAM86B1E9PN63 330 aa9.61□□□□□ -0.87
DDR1-242ENST00000465966 DHX15O43143 795 aaKnown RBP9.61□□□□□ -0.87
DDR1-242ENST00000465966 FAM86B2P0C5J1 330 aa9.61□□□□□ -0.87
DDR1-242ENST00000465966 DARSP14868 501 aaKnown RBP9.61□□□□□ -0.87
DDR1-242ENST00000465966 NPR3P17342 541 aa9.61□□□□□ -0.87
DDR1-242ENST00000465966 XBP1P17861 261 aa9.61□□□□□ -0.87
DDR1-242ENST00000465966 KLRC2P26717 231 aa9.61□□□□□ -0.87
DDR1-242ENST00000465966 KRT2P35908 639 aa9.61□□□□□ -0.87
DDR1-242ENST00000465966 SETQ01105 290 aaPredicted RBP9.61□□□□□ -0.87
DDR1-242ENST00000465966 RNASELQ05823 741 aaKnown RBP9.61□□□□□ -0.87
DDR1-242ENST00000465966 GNL2Q13823 731 aaKnown RBP9.61□□□□□ -0.87
DDR1-242ENST00000465966 LETM2Q2VYF4 491 aa9.61□□□□□ -0.87
DDR1-242ENST00000465966 KANK3Q6NY19 840 aa9.61□□□□□ -0.87
DDR1-242ENST00000465966 GLB1LQ6UWU2 654 aa9.61□□□□□ -0.87
DDR1-242ENST00000465966 ZNF598Q86UK7 904 aaKnown RBP9.61□□□□□ -0.87
DDR1-242ENST00000465966 NOSTRINQ8IVI9 506 aa9.61□□□□□ -0.87
DDR1-242ENST00000465966 LRRC71Q8N4P6 559 aa9.61□□□□□ -0.87
DDR1-242ENST00000465966 GPT2Q8TD30 523 aa9.61□□□□□ -0.87
DDR1-242ENST00000465966 SLC22A17Q8WUG5 538 aa9.61□□□□□ -0.87
DDR1-242ENST00000465966 NLRP7Q8WX94 980 aa9.61□□□□□ -0.87
DDR1-242ENST00000465966 STAMQ92783 540 aa9.61□□□□□ -0.87
DDR1-242ENST00000465966 IGSF21Q96ID5 467 aa9.61□□□□□ -0.87
DDR1-242ENST00000465966 GCOM2Q9BZD3 368 aaPredicted RBP9.61□□□□□ -0.87
DDR1-242ENST00000465966 FOXP1Q9H334 677 aaPredicted RBP9.61□□□□□ -0.87
DDR1-242ENST00000465966 BARHL2Q9NY43 387 aa9.61□□□□□ -0.87
DDR1-242ENST00000465966 TFIP11Q9UBB9 837 aaKnown RBP9.61□□□□□ -0.87
DDR1-242ENST00000465966 GABBR1Q9UBS5 961 aa9.61□□□□□ -0.87
DDR1-242ENST00000465966 WNT16Q9UBV4 365 aa9.61□□□□□ -0.87
DDR1-242ENST00000465966 DPP7Q9UHL4 492 aa9.61□□□□□ -0.87
DDR1-242ENST00000465966 CACNA1HO95180 2353 aa9.61□□□□□ -0.87
DDR1-242ENST00000465966 PTPRZ1P23471 2315 aaPredicted RBP9.61□□□□□ -0.87
DDR1-242ENST00000465966 CYP3A4P08684 503 aa9.6□□□□□ -0.87
DDR1-242ENST00000465966 GPC3P51654 580 aa9.6□□□□□ -0.87
DDR1-242ENST00000465966 CEBPZQ03701 1054 aaKnown RBP9.6□□□□□ -0.87
DDR1-242ENST00000465966 TBC1D8BQ0IIM8 1120 aa9.6□□□□□ -0.87
DDR1-242ENST00000465966 PUM1Q14671 1186 aaKnown RBP eCLIP9.6□□□□□ -0.87
DDR1-242ENST00000465966 SAFBQ15424 915 aaKnown RBP eCLIP9.6□□□□□ -0.87
DDR1-242ENST00000465966 KLHL40Q2TBA0 621 aa9.6□□□□□ -0.87
DDR1-242ENST00000465966 EARS2Q5JPH6 523 aaKnown RBP9.6□□□□□ -0.87
DDR1-242ENST00000465966 TWF2Q6IBS0 349 aaKnown RBP9.6□□□□□ -0.87
DDR1-242ENST00000465966 C15orf39Q6ZRI6 1047 aa9.6□□□□□ -0.87
DDR1-242ENST00000465966 KIAA2013Q8IYS2 634 aa9.6□□□□□ -0.87
DDR1-242ENST00000465966 AUTS2Q8WXX7 1259 aa9.6□□□□□ -0.87
DDR1-242ENST00000465966 RMDN1Q96DB5 314 aa9.6□□□□□ -0.87
DDR1-242ENST00000465966 ZNF668Q96K58 619 aaPredicted RBP9.6□□□□□ -0.87
DDR1-242ENST00000465966 SPATA32Q96LK8 384 aa9.6□□□□□ -0.87
DDR1-242ENST00000465966 ZNF396Q96N95 335 aaPredicted RBP9.6□□□□□ -0.87
DDR1-242ENST00000465966 INO80BQ9C086 356 aaPredicted RBP9.6□□□□□ -0.87
DDR1-242ENST00000465966 SH3GLB2Q9NR46 395 aa9.6□□□□□ -0.87
DDR1-242ENST00000465966 KAT6AQ92794 2004 aa9.6□□□□□ -0.87
DDR1-242ENST00000465966 PLXNA4Q9HCM2 1894 aa9.59□□□□□ -0.87
DDR1-242ENST00000465966 CFAP54Q96N23 3096 aa9.59□□□□□ -0.87
DDR1-242ENST00000465966 WDR64B1ANS9 1081 aa9.59□□□□□ -0.87
DDR1-242ENST00000465966 OATP04181 439 aa9.59□□□□□ -0.87
DDR1-242ENST00000465966 GALTP07902 379 aa9.59□□□□□ -0.87
DDR1-242ENST00000465966 CFHP08603 1231 aa9.59□□□□□ -0.87
DDR1-242ENST00000465966 FGFR4P22455 802 aa9.59□□□□□ -0.87
DDR1-242ENST00000465966 SFPQP23246 707 aaKnown RBP eCLIP9.59□□□□□ -0.87
DDR1-242ENST00000465966 GBP2P32456 591 aaPredicted RBP9.59□□□□□ -0.87
DDR1-242ENST00000465966 PHKA2P46019 1235 aa9.59□□□□□ -0.87
DDR1-242ENST00000465966 NASPP49321 788 aaPredicted RBP9.59□□□□□ -0.87
DDR1-242ENST00000465966 CLK2P49760 499 aaKnown RBP9.59□□□□□ -0.87
DDR1-242ENST00000465966 DNM2P50570 870 aa9.59□□□□□ -0.87
DDR1-242ENST00000465966 TOB1P50616 345 aaPredicted RBP9.59□□□□□ -0.87
DDR1-242ENST00000465966 NLRP5P59047 1200 aa9.59□□□□□ -0.87
DDR1-242ENST00000465966 PTPN14Q15678 1187 aa9.59□□□□□ -0.87
DDR1-242ENST00000465966 NOMO2Q5JPE7 1267 aa9.59□□□□□ -0.87
DDR1-242ENST00000465966 JAKMIP3Q5VZ66 844 aa9.59□□□□□ -0.87
DDR1-242ENST00000465966 ATL3Q6DD88 541 aa9.59□□□□□ -0.87
DDR1-242ENST00000465966 CYP26C1Q6V0L0 522 aa9.59□□□□□ -0.87
DDR1-242ENST00000465966 LINC01465Q8N7H1 131 aa9.59□□□□□ -0.87
DDR1-242ENST00000465966 DAGLBQ8NCG7 672 aa9.59□□□□□ -0.87
DDR1-242ENST00000465966 CCDC148Q8NFR7 591 aa9.59□□□□□ -0.87
DDR1-242ENST00000465966 URGCPQ8TCY9 931 aa9.59□□□□□ -0.87
DDR1-242ENST00000465966 NXPE3Q969Y0 559 aa9.59□□□□□ -0.87
DDR1-242ENST00000465966 PGBD4Q96DM1 585 aa9.59□□□□□ -0.87
DDR1-242ENST00000465966 KLHL5Q96PQ7 755 aa9.59□□□□□ -0.87
DDR1-242ENST00000465966 FAM193BQ96PV7 902 aaPredicted RBP9.59□□□□□ -0.87
DDR1-242ENST00000465966 TRAIPQ9BWF2 469 aa9.59□□□□□ -0.87
DDR1-242ENST00000465966 SCAND2PQ9GZW5 306 aaPredicted RBP9.59□□□□□ -0.87
DDR1-242ENST00000465966 GBP3Q9H0R5 595 aa9.59□□□□□ -0.87
DDR1-242ENST00000465966 NRDE2Q9H7Z3 1164 aa9.59□□□□□ -0.87
DDR1-242ENST00000465966 BRMS1Q9HCU9 246 aa9.59□□□□□ -0.87
DDR1-242ENST00000465966 MRPL17Q9NRX2 175 aaKnown RBP9.59□□□□□ -0.87
DDR1-242ENST00000465966 TBC1D13Q9NVG8 400 aa9.59□□□□□ -0.87
DDR1-242ENST00000465966 PCDHA4Q9UN74 947 aa9.59□□□□□ -0.87
DDR1-242ENST00000465966 SSX2IPQ9Y2D8 614 aa9.59□□□□□ -0.87
DDR1-242ENST00000465966 INPP5FQ9Y2H2 1132 aa9.59□□□□□ -0.87
DDR1-242ENST00000465966 CLIC4Q9Y696 253 aa9.59□□□□□ -0.87
DDR1-242ENST00000465966 KIAA1671Q9BY89 1806 aa9.59□□□□□ -0.88
DDR1-242ENST00000465966 DOCK5Q9H7D0 1870 aa9.58□□□□□ -0.88
DDR1-242ENST00000465966 IGLV3-22A0A075B6J6 115 aa9.58□□□□□ -0.88
DDR1-242ENST00000465966 ESYT2A0FGR8 921 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms