RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 A0A1B0GVL5 298 aa13.65□□□□□ -0.22
CHPF2-202ENST00000465601 TTLL13PA6NNM8 815 aa13.65□□□□□ -0.22
CHPF2-202ENST00000465601 K7ERI5 159 aa13.65□□□□□ -0.22
CHPF2-202ENST00000465601 FGFR1P11362 822 aa13.65□□□□□ -0.22
CHPF2-202ENST00000465601 ATF7P17544 494 aaPredicted RBP13.65□□□□□ -0.22
CHPF2-202ENST00000465601 EFNA5P52803 228 aa13.65□□□□□ -0.22
CHPF2-202ENST00000465601 FAM187BQ17R55 369 aa13.65□□□□□ -0.22
CHPF2-202ENST00000465601 TMEM132AQ24JP5 1023 aa13.65□□□□□ -0.22
CHPF2-202ENST00000465601 LONRF3Q496Y0 759 aa13.65□□□□□ -0.22
CHPF2-202ENST00000465601 PAN2Q504Q3 1202 aaKnown RBP13.65□□□□□ -0.22
CHPF2-202ENST00000465601 UBXN11Q5T124 520 aa13.65□□□□□ -0.22
CHPF2-202ENST00000465601 PPP4R3CPQ6ZMV5 832 aa13.65□□□□□ -0.22
CHPF2-202ENST00000465601 ZNF598Q86UK7 904 aaKnown RBP13.65□□□□□ -0.22
CHPF2-202ENST00000465601 CDR2LQ86X02 465 aaPredicted RBP13.65□□□□□ -0.22
CHPF2-202ENST00000465601 MYCT1Q8N699 235 aa13.65□□□□□ -0.22
CHPF2-202ENST00000465601 SP7Q8TDD2 431 aaPredicted RBP13.65□□□□□ -0.22
CHPF2-202ENST00000465601 SPIRE2Q8WWL2 714 aa13.65□□□□□ -0.22
CHPF2-202ENST00000465601 DDX12PQ92771 950 aa13.65□□□□□ -0.22
CHPF2-202ENST00000465601 ZNF689Q96CS4 500 aaPredicted RBP13.65□□□□□ -0.22
CHPF2-202ENST00000465601 NTPCRQ9BSD7 190 aaKnown RBP13.65□□□□□ -0.22
CHPF2-202ENST00000465601 CCDC113Q9H0I3 377 aa13.65□□□□□ -0.22
CHPF2-202ENST00000465601 ELAC1Q9H777 363 aaKnown RBP13.65□□□□□ -0.22
CHPF2-202ENST00000465601 RC3H2Q9HBD1 1191 aaKnown RBP13.65□□□□□ -0.22
CHPF2-202ENST00000465601 FAM105AQ9NUU6 356 aa13.65□□□□□ -0.22
CHPF2-202ENST00000465601 RNF216Q9NWF9 866 aaPredicted RBP13.65□□□□□ -0.22
CHPF2-202ENST00000465601 CHMP5Q9NZZ3 219 aa13.65□□□□□ -0.22
CHPF2-202ENST00000465601 KCNH3Q9ULD8 1083 aa13.65□□□□□ -0.22
CHPF2-202ENST00000465601 ODF2LQ9ULJ1 636 aa13.65□□□□□ -0.22
CHPF2-202ENST00000465601 PCDHB2Q9Y5E7 798 aa13.65□□□□□ -0.22
CHPF2-202ENST00000465601 PRRC2BQ5JSZ5 2229 aaKnown RBP13.65□□□□□ -0.22
CHPF2-202ENST00000465601 TRANK1O15050 2925 aa13.65□□□□□ -0.22
CHPF2-202ENST00000465601 NLRC5Q86WI3 1866 aa13.65□□□□□ -0.22
CHPF2-202ENST00000465601 TRIP11Q15643 1979 aa13.65□□□□□ -0.22
CHPF2-202ENST00000465601 TMEM265A0A087WTH1 108 aa13.64□□□□□ -0.23
CHPF2-202ENST00000465601 LINC01553A4QN01 128 aa13.64□□□□□ -0.23
CHPF2-202ENST00000465601 TBKBP1A7MCY6 615 aa13.64□□□□□ -0.23
CHPF2-202ENST00000465601 ACKR2O00590 384 aa13.64□□□□□ -0.23
CHPF2-202ENST00000465601 ZNF623O75123 536 aa13.64□□□□□ -0.23
CHPF2-202ENST00000465601 TBCAO75347 108 aaKnown RBP13.64□□□□□ -0.23
CHPF2-202ENST00000465601 EOMESO95936 686 aa13.64□□□□□ -0.23
CHPF2-202ENST00000465601 EDN1P05305 212 aa13.64□□□□□ -0.23
CHPF2-202ENST00000465601 PFKFB1P16118 471 aa13.64□□□□□ -0.23
CHPF2-202ENST00000465601 ZNF131P52739 623 aa13.64□□□□□ -0.23
CHPF2-202ENST00000465601 SMTNP53814 917 aa13.64□□□□□ -0.23
CHPF2-202ENST00000465601 PRPF4BQ13523 1007 aaKnown RBP13.64□□□□□ -0.23
CHPF2-202ENST00000465601 BTG3Q14201 252 aaPredicted RBP13.64□□□□□ -0.23
CHPF2-202ENST00000465601 GRIN2CQ14957 1233 aa13.64□□□□□ -0.23
CHPF2-202ENST00000465601 NT5DC1Q5TFE4 455 aa13.64□□□□□ -0.23
CHPF2-202ENST00000465601 NOTUMQ6P988 496 aa13.64□□□□□ -0.23
CHPF2-202ENST00000465601 FIBCD1Q8N539 461 aa13.64□□□□□ -0.23
CHPF2-202ENST00000465601 LPPQ93052 612 aa13.64□□□□□ -0.23
CHPF2-202ENST00000465601 DNAJC19Q96DA6 116 aa13.64□□□□□ -0.23
CHPF2-202ENST00000465601 PRIMPOLQ96LW4 560 aa13.64□□□□□ -0.23
CHPF2-202ENST00000465601 TRAIPQ9BWF2 469 aa13.64□□□□□ -0.23
CHPF2-202ENST00000465601 EIF2AQ9BY44 585 aaKnown RBP13.64□□□□□ -0.23
CHPF2-202ENST00000465601 TMEM134Q9H6X4 195 aa13.64□□□□□ -0.23
CHPF2-202ENST00000465601 PARVGQ9HBI0 331 aa13.64□□□□□ -0.23
CHPF2-202ENST00000465601 RNF19AQ9NV58 838 aa13.64□□□□□ -0.23
CHPF2-202ENST00000465601 MTMR10Q9NXD2 777 aa13.64□□□□□ -0.23
CHPF2-202ENST00000465601 LARSQ9P2J5 1176 aaKnown RBP13.64□□□□□ -0.23
CHPF2-202ENST00000465601 ARHGAP28Q9P2N2 729 aa13.64□□□□□ -0.23
CHPF2-202ENST00000465601 KCNG1Q9UIX4 513 aa13.64□□□□□ -0.23
CHPF2-202ENST00000465601 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.63□□□□□ -0.23
CHPF2-202ENST00000465601 A0A1B0GUA9 196 aa13.63□□□□□ -0.23
CHPF2-202ENST00000465601 MEIS3P2A8K0S8 358 aa13.63□□□□□ -0.23
CHPF2-202ENST00000465601 NPTXRO95502 500 aa13.63□□□□□ -0.23
CHPF2-202ENST00000465601 SKIP12755 728 aa13.63□□□□□ -0.23
CHPF2-202ENST00000465601 RAB27AP51159 221 aa13.63□□□□□ -0.23
CHPF2-202ENST00000465601 TAS1R3Q7RTX0 852 aa13.63□□□□□ -0.23
CHPF2-202ENST00000465601 MRPL10Q7Z7H8 261 aaKnown RBP13.63□□□□□ -0.23
CHPF2-202ENST00000465601 FSIP1Q8NA03 581 aa13.63□□□□□ -0.23
CHPF2-202ENST00000465601 TMEM161BQ8NDZ6 487 aa13.63□□□□□ -0.23
CHPF2-202ENST00000465601 ARNTL2Q8WYA1 636 aa13.63□□□□□ -0.23
CHPF2-202ENST00000465601 CCDC51Q96ER9 411 aa13.63□□□□□ -0.23
CHPF2-202ENST00000465601 CUEDC2Q9H467 287 aa13.63□□□□□ -0.23
CHPF2-202ENST00000465601 PRDM12Q9H4Q4 367 aa13.63□□□□□ -0.23
CHPF2-202ENST00000465601 KBTBD4Q9NVX7 518 aa13.63□□□□□ -0.23
CHPF2-202ENST00000465601 SERTAD1Q9UHV2 236 aa13.63□□□□□ -0.23
CHPF2-202ENST00000465601 MTUS1Q9ULD2 1270 aa13.63□□□□□ -0.23
CHPF2-202ENST00000465601 CNTNAP2Q9UHC6 1331 aa13.63□□□□□ -0.23
CHPF2-202ENST00000465601 COL4A6Q14031 1691 aa13.63□□□□□ -0.23
CHPF2-202ENST00000465601 A0A1W2PQ27 194 aa13.62□□□□□ -0.23
CHPF2-202ENST00000465601 A0A1W2PQ64 194 aa13.62□□□□□ -0.23
CHPF2-202ENST00000465601 A0A1W2PQD8 194 aa13.62□□□□□ -0.23
CHPF2-202ENST00000465601 RFXAPO00287 272 aa13.62□□□□□ -0.23
CHPF2-202ENST00000465601 HOXA2O43364 376 aa13.62□□□□□ -0.23
CHPF2-202ENST00000465601 TRAK2O60296 914 aa13.62□□□□□ -0.23
CHPF2-202ENST00000465601 MAPTP10636 758 aaKnown RBP13.62□□□□□ -0.23
CHPF2-202ENST00000465601 IDEP14735 1019 aa13.62□□□□□ -0.23
CHPF2-202ENST00000465601 NMT1P30419 496 aaKnown RBP13.62□□□□□ -0.23
CHPF2-202ENST00000465601 NDUFA8P51970 172 aa13.62□□□□□ -0.23
CHPF2-202ENST00000465601 ERVK-21P61565 698 aa13.62□□□□□ -0.23
CHPF2-202ENST00000465601 CLLU1OSQ5K130 101 aa13.62□□□□□ -0.23
CHPF2-202ENST00000465601 ATF7IP2Q5U623 682 aa13.62□□□□□ -0.23
CHPF2-202ENST00000465601 EEF1DP3Q658K8 133 aa13.62□□□□□ -0.23
CHPF2-202ENST00000465601 SLC27A1Q6PCB7 646 aa13.62□□□□□ -0.23
CHPF2-202ENST00000465601 HAUS6Q7Z4H7 955 aa13.62□□□□□ -0.23
CHPF2-202ENST00000465601 SFR1Q86XK3 245 aa13.62□□□□□ -0.23
CHPF2-202ENST00000465601 FAM178BQ8IXR5 827 aa13.62□□□□□ -0.23
CHPF2-202ENST00000465601 CMTR2Q8IYT2 770 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms